G189013 (tmem30a,LOC104951461,LOC107377958,LOC103366810,LOC108228983,LOC107101491,LOC103381310)


Basic Information

Item Value
gene id G189013
gene name tmem30a,LOC104951461,LOC107377958,LOC103366810,LOC108228983,LOC107101491,LOC103381310
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 32454698 ~ 32456243 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU256130
CAACTCTTGTCGACCAAGtgttgccttacttccttctaccctgttgcttttttccaaggttttgtcatttttttcaaagtttatgtcgcctttttttaattagcatttaaatcttattcagttacaaggctgttgtttagtaaatccaTCTCTGCCATTGCTGTGTTGTTCCTCTTCATATAGACTTTCTTTTCTACCAAAATAATccgcgctggtcagggggtacgtGGCTTAGAAACACAATTCAAAAGGGGAACACCATTTATCGAAGTTTGCCAACCAGTGACATAAAGGATACTGTAGACGACCTCCAGTGTGTAGTTTCCTCGGGGCAGCGTTGGAACCATGCTGCTCTTCTTGTTGATGATGCGGTAGAGTTTGCGGAAGGTCGGCAGGGCTGCGGTTCTCATCCACACGATGAAGTCCTCGTTGATGAAGCCGTTGTTCCCCGGGTCAGCGTCCAGCTCGTAGACAGGCCTGCGCCAGTTCAACGGCTTCGTGGTACCTGAAAAGCGGCCGTGAGGTTGGGGTTGCCT

Function

symbol description
tmem30a Enables aminophospholipid flippase activity. Involved in several processes, including drug transmembrane transport; phospholipid transport; and positive regulation of transport. Located in endoplasmic reticulum and plasma membrane. Part of phospholipid-translocating ATPase complex.

NR:

description
PREDICTED: cell cycle control protein 50A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256130 True 536 lncRNA 0.47 2 32454698 32456243

Neighbor

gene id symbol gene type direction distance location
cd109 NA coding upstream 308788 32111590 ~ 32145910 (+)
crnkl1 crnkl1 coding upstream 349038 32093951 ~ 32105660 (+)
nkx2.4b nkx2-4,LOC103364681,LOC102215835,LOC102780891 coding upstream 569896 31881465 ~ 31884802 (+)
nkx2.2b NA coding upstream 585402 31866894 ~ 31869296 (+)
cebpz LOC104961443,LOC104960473 coding upstream 697780 31735570 ~ 31756918 (+)
senp6a NA coding downstream 79492 32535735 ~ 32569277 (+)
nt5e NA coding downstream 643126 33099369 ~ 33127591 (+)
bub1 NA coding downstream 745162 33201405 ~ 33228839 (+)
LOC120546516 NA coding downstream 774791 33231034 ~ 33238327 (+)
LOC120546153 LOC103369399 coding downstream 823668 33279911 ~ 33286940 (+)
G189012 NA non-coding upstream 7559 32443638 ~ 32447139 (+)
G189011 NA non-coding upstream 12079 32442283 ~ 32442619 (+)
G188987 LOC103366807 non-coding upstream 135523 32316300 ~ 32319175 (+)
G188980 NA non-coding upstream 215874 32238483 ~ 32238824 (+)
LOC120547295 NA non-coding upstream 225371 32228686 ~ 32229327 (+)
G189020 NA non-coding downstream 21611 32477854 ~ 32478492 (+)
G189024 NA non-coding downstream 59112 32515355 ~ 32515647 (+)
LOC120547301 NA non-coding downstream 69279 32525522 ~ 32535227 (+)
G189027 NA non-coding downstream 107607 32563850 ~ 32570635 (+)
G189029 NA non-coding downstream 109289 32565532 ~ 32566361 (+)
LOC120546196 LOC105017826 other upstream 672632 31776963 ~ 31782066 (+)
LOC120546816 NA other upstream 840176 31606054 ~ 31614522 (+)
hivep2a LOC103373864 other upstream 1145302 31169067 ~ 31309396 (+)
G188352 NA other upstream 1572252 30611681 ~ 30882446 (+)
myo6a myo6,LOC103369425 other downstream 120213 32576456 ~ 32767003 (+)
mei4 NA other downstream 509595 32965838 ~ 33041169 (+)
pex7 pex7,LOC102797744 other downstream 871849 33328092 ~ 33386989 (+)
LOC120546192 slc35d3,LOC102797457 other downstream 943558 33399801 ~ 33416086 (+)
G189269 NA other downstream 997753 33453996 ~ 33458768 (+)

Expression


Co-expression Network