LOC120546446 (LOC103364256)


Basic Information

Item Value
gene id LOC120546446
gene name LOC103364256
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 33846444 ~ 33856412 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU256566
TGTGCGGCGGGCTGGATGGCTCTCTTTTAAACCTCTCATCACTGTCAACAAAGACAGGAAGCTGGAGCTGGTCGCTCGCCGCAAGTGGAAACACTACTGGGTCACCCTGAAAGgctgctctctgctgttttaTGAGACCTACGGGAAGACGCCTGGCGCCGAGCGGGAGCTTTCGCCGCGCTACGCCCTGCTGGCGGACGACAGCATCGTGCAGGCCGTCCCCGAACATCCCAAAAAGGAGCACGTCCTCTGTCTTAGCAACGCGCACGGAGACGTCTACCTGTTCCAGG
>XM_039781373.1
agagaagaggaggaggagagagagagagagagagagagagagacagagggagggagaggaggctgCAGGACGGATATGAAGGAGCTGCTGAGTTTCTGTTTCTGAAGACTTAAAAACCGGTTTTGCGATGGGGAACACCGACAGCCACGCCAGCTTCGTGTCTCCCGCCAAATCGCCACCGTGTTCGCTCCGGCTCTCCTCCTGCAGGAGGGAGGAGgcgccatcatcatcatcatcggcTCGCAGCTGGTGGAGGACCAATCAGAGCCGTAGCCGCGGGAGGAACTACCTGAAACCGCAGCAGGCCGCCGGGCTGCCGTACGCGTCCTGGCGTTATGAACACGCCCCCACGCCGGGCGCCGCGCCTACTCCCAGGTTCTTCACCGGAAGTACCGGGCACAGCGTGGAGTGCACGTCTCTGCAGAGCAACGCCAGTTGCCGTGGCGGCGCTGGCGGCAGCCCCAAAGTGCTGCTCGGCAAAGACGGGAGCATGAGGGTGGAGTTCACCAACGCCAGGGGAGTCTCGGTGGAGACGCAGGGGCTCGCCGGCGCCACGACAGCAGCCGAACCTTCGCTGCGCACCAGTAAAGGCAGCTCGCTGAGCTCGGACGGGTCCTGGTACGACTCGCCGTGGGGGGCGGCCGGCGAGCTGGCCGACAACGTGTTCGTCTGCGCGCCGAGCAGCGCGCACGCTGCCTACTACTCGGCACGCACAGACGAGATGTCCAACGGTAACGCTGTCTTCTCGGCGCAAGTGGACGACTCGGTTGTGTTTAACGCCAGCGTCTTGTTCCCCTCTGCTTCCGGCGAGAACGGCGAGTTCTCCGGCGCCTACAACACTTGTTCCTCTGGGCGCACCGAGGACAGCGGCATCGGGGACTCGGTGATCCTGCCGGCCGACCTGCGAGACTTCAGCTCTACGTCGCTGGACAGCGTTTACCAAAACaccgagcagcagcagcagcagcccgcTGCCTTCCCTACCGCGTCGGACGCCGCTGCCTTCTGCTGCTCGGCGCCGCGGCTGGACGACATCATCGCAGAAGAGGAGGGGGGGTCAGGCGTGGAGCAGCGGTACTGCTCGCTGACGCTCCCCTGTCGCAGGACCGAGCCCGTTGGAGCTACCGCCGGGAACAGCCGCAAAGACTTCCTGAAGAGCCGGATCCGACAACTCAGCGACTGGACGGGCAGCCTGagcaggaagaagaggaggatccAGGAGCCGTACGGCAGCGACAGCAGCAATGGCTGCGACCTGCTGTGGTCCTCCAACCCTCTCCACgctcagaaccagaaccagggcCAGAACCAGGTCCCAGCAGCCCCCTGGGGCTCCTTCAGGAGCCTCAACCACAACCAGAACCAGGTCCCTGCAGCCCCCTGGGGCTCCTTCAGAAGCCTCaatcagaaccagaaccagagccGGAGCAGCGATGCCCAGCGGCAGAACGTCTACGAGAACTTCATGCAGGAGCTGGAGACGGGCCGGACCGAGCCTTCGGACGGggaagagggggaggaagagatggaggaggaggaggaggaggggggagacgGGCGTCTGGACTTCCTGTTTGAGACGGATCACGGCGCTGTGCGGCGGGCTGGATGGCTCTCTTTTAAACCTCTCATCACTGTCAACAAAGACAGGAAGCTGGAGCTGGTCGCTCGCCGCAAGTGGAAACACTACTGGGTCACCCTGAAAGgctgctctctgctgttttaTGAGACCTACGGGAAGACGCCTGGCGCCGAGCGGGAGCTTTCGCCGCGCTACGCCCTGCTGGCGGACGACAGCATCGTGCAGGCCGTCCCCGAACATCCCAAAAAGGAGCACGTCCTCTGTCTTAGCAACGCGCACGGAGACGTCTACCTGTTCCAGTGTGAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256566 False 290 lncRNA 0.60 2 33853678 33855469
XM_039781373.1 True 1891 mRNA 0.64 5 33846444 33856412

Neighbor

gene id symbol gene type direction distance location
LOC120546181 adgrg6 coding upstream 180191 33629800 ~ 33666253 (+)
LOC120546153 LOC103369399 coding upstream 559504 33279911 ~ 33286940 (+)
LOC120546516 NA coding upstream 608117 33231034 ~ 33238327 (+)
bub1 NA coding upstream 617605 33201405 ~ 33228839 (+)
nt5e NA coding upstream 718853 33099369 ~ 33127591 (+)
LOC120546767 LOC103364257,LOC107092024 coding downstream 151984 34008396 ~ 34013448 (+)
LOC120546447 NA coding downstream 162219 34018631 ~ 34035953 (+)
LOC120547053 NA coding downstream 180644 34037056 ~ 34052641 (+)
LOC120547054 NA coding downstream 199568 34055980 ~ 34065783 (+)
LOC120546448 NA coding downstream 248983 34105395 ~ 34110113 (+)
G189327 NA non-coding upstream 14841 33760348 ~ 33831603 (+)
G189299 NA non-coding upstream 19073 33814904 ~ 33827371 (+)
G189328 NA non-coding upstream 73335 33772638 ~ 33773109 (+)
G189311 NA non-coding upstream 84228 33743508 ~ 33762216 (+)
G189325 NA non-coding upstream 89374 33756783 ~ 33757070 (+)
G189344 NA non-coding downstream 6793 33863205 ~ 33876447 (+)
G189294 NA non-coding downstream 30003 33886415 ~ 33944584 (+)
G189302 NA non-coding downstream 31100 33887512 ~ 33897573 (+)
G189345 NA non-coding downstream 34095 33890507 ~ 33892450 (+)
G189352 NA non-coding downstream 81643 33938055 ~ 33938349 (+)
LOC120546444 NA other upstream 75042 33765353 ~ 33771402 (+)
LOC120547364 NA other upstream 82818 33763465 ~ 33763626 (+)
G189309 NA other upstream 160888 33641620 ~ 33685556 (+)
G189269 NA other upstream 387676 33453996 ~ 33458768 (+)
LOC120546192 slc35d3,LOC102797457 other upstream 430358 33399801 ~ 33416086 (+)
LOC120546766 LOC103364256 other downstream 2734 33859146 ~ 34000536 (+)
G189307 NA other downstream 75652 33932064 ~ 33939387 (+)
G189305 NA other downstream 109171 33965583 ~ 33986476 (+)
LOC120546451 LOC103364258,LOC108444017 other downstream 522088 34378500 ~ 34455344 (+)
G189544 NA other downstream 606496 34462908 ~ 34464897 (+)

Expression


Co-expression Network