eif2b2 (eif2b2)


Basic Information

Item Value
gene id eif2b2
gene name eif2b2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 18733328 ~ 18737691 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780896.1
aggcgcagttcatctcgaacgagcctactgTCTGTGCACAAAACTGTCAAGTTTACAGTTGCTGACGCAATAGATCCCGTGAAGCGGTCCACCAATCAAATGAAAGCGCAGTCATAATCACCCGGATGTACTCCTGAAGTACTTCCTCGTCAATATTTGCATGGTAGTTGGTATGTCTTGTAGCTAAACTGACAACACGTCGTTAATATAACAACTATGCCGGGCCCAGACAAAGAAACAGACCTGACGGAGAGAATCGAAGCGTTTCTGTCCTACCTGAAGCGTGGAGGGAGCGGGACGGGACCACAGCGGGGCTCGGCGGAGACAGCCCGAGAGACGACAGCCCTGCTCCGCAGAATCACAGCCCAGGCTCGGTGGAGCAGCGCAGGCGATCTGATGGAAATAATCCGTAAAGAGGGGAGGAGAATAACTGCCGCCCAGCCATCAGAGACCACAGTTGGTAACATGATTAGACGGGTGTTGAAGATCGTCAGAGAGGAATATGCCAGATCTCGAGGCAGCAGTGAAGAGACGGACCAGCAGGAATCTCTCCACAAGCTGCTGACCTCTGGAGGACTCAGTGAGGAGAACTTCAGACAGCATTTCGCCACCCTCAAAGCAAACGTCATCGAGGCCATCAATGAGTTGCTGACCGAGCTGGAGGGAACAACTGACAACATTGcaatgcaggccctggagcacATTCACTCTAATGAGGTCATCATGACTATTGGCCGCTCTCGCACCGTGGAGGCCTTCCTCAAAGACGCTGCACGCAAACGCAAGTTCCATGTCATCGTGGCAGAGTGCGCCCCCTTCTGCCAGGGACATGAGATGGCAACTAGTCTCTCAAAAGCCGGCATCGAAACAACCGTGATTGCAGACGCTGCCATATTTGCAGTAATGTCTCGTGTAAATAAGGTCATCATTGGTACACAGACAGTTCTAGCAAACGGAGGTCTGAGGGCTGTTAATGGGACACACACTCTGGCTCTTGCAGCCAAGCACCACTCAACACCGCTGATTGTTTGTGCTCCAATGTTCAAGCTCTCACCTCAGTTCCCAAATGAAGAGGATACCTTCCATAAGTTTGTCTCTCCACATGAGGTGCTTCCTTTCACTGAAGGGGAGATTCTCTCAAAGGTGAACGTGCACTGTCCAGTGTTTGACTATGTCCCGCCTGAGCTCATCACACTGTTCATTTCTAACATTGGAGGACATGCACCGTCATACATTTACCGACTGATGAGTGAACTTTACCACCCAGAAGACCACGAACTTTAACCGGTGTATTTaactaataaataatataataattga

Function

symbol description
eif2b2 Predicted to enable translation initiation factor activity. Predicted to contribute to guanyl-nucleotide exchange factor activity. Predicted to be involved in translational initiation. Predicted to act upstream of or within translation. Predicted to be part of eukaryotic translation initiation factor 2B complex. Human ortholog(s) of this gene implicated in leukoencephalopathy with vanishing white matter. Orthologous to human EIF2B2 (eukaryotic translation initiation factor 2B subunit beta).

NR:

description
translation initiation factor eIF-2B subunit beta

GO:

id name namespace
GO:0019509 L-methionine salvage from methylthioadenosine biological_process
GO:0051716 cellular response to stimulus biological_process
GO:0043087 regulation of GTPase activity biological_process
GO:0006446 regulation of translational initiation biological_process
GO:0042552 myelination biological_process
GO:0014003 oligodendrocyte development biological_process
GO:0005851 eukaryotic translation initiation factor 2B complex cellular_component
GO:0046523 S-methyl-5-thioribose-1-phosphate isomerase activity molecular_function
GO:0005085 guanyl-nucleotide exchange factor activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0005525 GTP binding molecular_function
GO:0003743 translation initiation factor activity molecular_function

KEGG:

id description
K03754 EIF2B2; translation initiation factor eIF-2B subunit beta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780896.1 True 1320 mRNA 0.50 8 18733328 18737691

Neighbor

gene id symbol gene type direction distance location
tmed10 tmed10 coding upstream 10342 18717023 ~ 18722986 (+)
fosab LOC104951064,LOC103372631,LOC100709203 coding upstream 35224 18695655 ~ 18698104 (+)
LOC120547135 LOC104964429,LOC103372634 coding upstream 78814 18648301 ~ 18654514 (+)
LOC120546828 LOC103363571,LOC107377519,LOC101067486,LOC106919680 coding upstream 152205 18500991 ~ 18581123 (+)
flvcr2b LOC104964435,LOC107377514,LOC101468256,LOC103363569,LOC108242486,LOC100710273 coding upstream 291066 18419656 ~ 18442262 (+)
LOC120547336 LOC104951086,LOC103372628 coding downstream 17202 18754893 ~ 18760888 (+)
LOC120546187 acss1,LOC100712210,LOC102211118,LOC102308435,LOC101486165,LOC103364973 coding downstream 23726 18761417 ~ 18779102 (+)
LOC120546186 kcnh5,LOC103364987 coding downstream 60566 18798257 ~ 18813714 (+)
LOC120546190 l3hypdh coding downstream 76918 18814609 ~ 18818443 (+)
trnae-cuc_27 NA coding downstream 194625 18932316 ~ 18932387 (+)
G185471 NA non-coding upstream 28094 18703965 ~ 18705234 (+)
LOC120546607 NA non-coding upstream 43295 18666640 ~ 18690033 (+)
G185415 LOC106525279 non-coding upstream 88174 18643419 ~ 18645154 (+)
G185414 NA non-coding upstream 92947 18636374 ~ 18640381 (+)
LOC120546827 NA non-coding upstream 269300 18443952 ~ 18464028 (+)
G185495 daam1,LOC108240128 non-coding downstream 81393 18819084 ~ 18821146 (+)
G185589 NA non-coding downstream 277035 19014726 ~ 19019533 (+)
G185590 NA non-coding downstream 285005 19022696 ~ 19023030 (+)
G185591 kcnk2 non-coding downstream 286573 19024264 ~ 19024578 (+)
G185592 kcnk2 non-coding downstream 305533 19043224 ~ 19043548 (+)
LOC120547227 LOC104932566,LOC103364615 other upstream 21334 18705856 ~ 18711994 (+)
ylpm1 ylpm1 other upstream 98276 18598365 ~ 18635052 (+)
znf513a znf513,LOC102795572 other upstream 593068 18127131 ~ 18140260 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other upstream 678402 18020956 ~ 18054926 (+)
G185237 NA other upstream 816080 17916853 ~ 17917248 (+)
LOC120546624 prox1 other downstream 466463 19204154 ~ 19237033 (+)
acbd3 acbd3,LOC102799892 other downstream 616925 19354616 ~ 19427489 (+)
si:dkey-206f10.1 LOC103360989,LOC103380838 other downstream 630029 19367720 ~ 19389223 (+)
nhsl1b nhsl1,LOC101470763 other downstream 691904 19429595 ~ 19541832 (+)
zgc:193593 NA other downstream 834882 19572573 ~ 19620783 (+)

Expression


Co-expression Network