LOC120546258


Basic Information

Item Value
gene id LOC120546258
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 15720429 ~ 15723341 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781078.1
TCTGTGACTATTGTGTCAGTCCAGAGTAGATCTACCCAGGTCCTCAGTCATGCTGCGTCCATCATTCCTCAGCCTTCTCCTGGCATGTGCAGTGTCTCTTAGCAGCTCTGCTGTATTTCTAGAAAATGGCATGCCCATCCTGTGGGCCCAAACGGCCGGCCAATTGACTGACCTGCCGACACAGAATGGCATCCTGACCCCCGACCCATGGAACTTCCTTCATCGCATGAGTCTTTACCGTCTGATGATAGTTGCAACAGACCCTTTAATGGGATCAATGGGGACCAATGCCACAGACAGTCCGCTGTGGGGACTGCCACTGCAGTTGGGATGGATGCTTACCTCAGGGCGTCTCGCTGACCCAACCAGTGCTACCACTTGCGGCCTGCAAACAGGAGATACTATGTGTGTTTCTACTCAGAGCTGGTGGAGCTgTGTGACCTACTTTGTCTCTGTACTGCCCTTCCTGTCTGCTGCAAAGCAGGGCTTCATGGGAGAAGGAGTTCAGGTCCAGATGCAGATACCTGAAGGCGTACAGGACTATTGCACCACATATGCAAGCTGTGCAGCTAGCTACCCTGACGCCATGTCTAAGTGGGATGCCTTTTTCCAGGGCCTCAAGGCTGCAGCTGACTCTCCTCTCCCTGAAAATGAGAAGAAAGACTCTCTCCTTGGTCTCTACTGGGTGGCCCAAATGGCTTCAACTTATGCCTCTGCTGCATGCAACTCCAggCAGAGCCACTACTCCTCTACAGAGGTTTCCTTTGCAAAAAGCTGGCTGAACTCAGCTGAGTATGTTTCTGCTGCTCATTTCCAATCCAATTTGCAAAAATCTTCAATGTTCATATCCCCTCTCCCAAGCCGTATTTTGCGGGTGGACGACAGCGCGCCTAACATAGCCGATCTGAGTTCGGAGGAGAACCACACACTCTATGTCTTCTCCTGGATTAACAGTATGAACAATCTACTTGGTGGGACATTGGTGAGTATGTGGAAAAGTGCCATGTGTTCAGTGAACACAAGAGAGAAAGGCAGTAAGTTGCTGGAGGAGCTCCTACTGAATCCCAGCTTTGCCACACAAACTTTCCTGTCCATCATCACTGGAATGACTTCGAGCTGCTGAGACAAACTTAGAGAGATAGCAACTCTAATTACATAGTTGTCATTTTTTACAGTACATAATACAGGAGTACTGTGGTATTACTCAGAGGGAGGGATCCCTAAGAGAAGacacttgcagaacaaaaatgcATAATTGATATTTCTTTGAAAGTAAATGATGCCAATATTCAGAAGGTGTAGATCAACAGGAATTCCAGGTTACAATTTAAAAGCAGGTAGACCTCTGTATGTCTCTGTTCTCGTCACTCTCTTGTGAGTATGTGTGTCCCAATAAAGTATCAACAAACCCTAA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781078.1 True 1414 mRNA 0.48 8 15720429 15723341

Neighbor

gene id symbol gene type direction distance location
wdr21 dcaf4 coding downstream 25808 15688518 ~ 15694621 (-)
pigh pigh,LOC102778419 coding downstream 40177 15677870 ~ 15680252 (-)
vps18 vps18 coding downstream 60938 15653902 ~ 15659491 (-)
ino80 ino80 coding downstream 68134 15606068 ~ 15652295 (-)
syndig1l LOC108231752,LOC106536771 coding downstream 335842 15347760 ~ 15384587 (-)
chga NA coding upstream 54082 15777423 ~ 15785606 (-)
sel1l sel1l coding upstream 72430 15795771 ~ 15806849 (-)
arhgap18 arhgap18 coding upstream 84742 15808083 ~ 15830786 (-)
fkbp6 fkbp6 coding upstream 108438 15831779 ~ 15839516 (-)
tmem244 tmem244 coding upstream 117805 15841146 ~ 15919640 (-)
LOC120546341 NA non-coding downstream 19430 15696500 ~ 15700999 (-)
G184452 LOC103369942,LOC106518591 non-coding downstream 431544 15283249 ~ 15288885 (-)
G184420 NA non-coding downstream 546310 15173711 ~ 15174119 (-)
G184417 LOC101473650,LOC102776111,LOC103369946,LOC102310296 non-coding downstream 546789 15169136 ~ 15173640 (-)
G184404 LOC103369948,LOC101169258 non-coding downstream 581714 15132217 ~ 15138715 (-)
G184662 stx7 non-coding upstream 11077 15734418 ~ 15735282 (-)
G184668 ctgf non-coding upstream 49345 15772686 ~ 15775486 (-)
G184696 NA non-coding upstream 289159 16012500 ~ 16015535 (-)
G184699 LOC107390449 non-coding upstream 301877 16025218 ~ 16033730 (-)
G184702 coq8a,LOC102220701,LOC103144166 non-coding upstream 314409 16037750 ~ 16042215 (-)
rps29 NA other downstream 608950 15110240 ~ 15111479 (-)
LOC120547045 LOC103359896,LOC104919819,LOC100704859,LOC107378087,LOC104956714 other downstream 1052828 14657177 ~ 14667601 (-)
naa30 naa30,LOC102795089,LOC104960600 other downstream 1107483 14571380 ~ 14612946 (-)
G184299 LOC101066055,LOC100706360,LOC102203025 other downstream 1222059 14472201 ~ 14498370 (-)
mfsd2b mfsd2b other downstream 2229286 13473683 ~ 13491143 (-)
si:dkey-177p2.18 LOC102081001,LOC102302990,LOC107088471,LOC105937616,LOC105357244,LOC102210773,LOC101470269,LOC104966503 other upstream 65485 15788826 ~ 15795638 (-)
LOC120546224 NA other upstream 342513 16065854 ~ 16068309 (-)
LOC120546332 akap7 other upstream 423249 16146590 ~ 16188330 (-)
snap91b LOC101475403,LOC107094487,LOC107378032,LOC106520033,LOC108247682 other upstream 767309 16490650 ~ 16517874 (-)
gpatch2 gpatch2,LOC102785715 other upstream 1102311 16825652 ~ 16835983 (-)

Expression


Co-expression Network