aldh8a1 (aldh8a1)


Basic Information

Item Value
gene id aldh8a1
gene name aldh8a1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17506954 ~ 17515583 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781170.1
CATTTTGGATCCATGTGGTTAGACACATTACCTGCAGCAGTCATTCTCTCAGGCTGTTGTATTAGTTTGATATCATCGGTTTGCAACCATGCCGAACGCCTCAGAGCAGCGTCCATACCTGGTTCTGGAGAACTACATCGGAGGGAAGTTCATCCCTAGTCTGAACCACATCGACTCCTACGACCCGTCCATCGGGGAGGTCTACTGCAAAGTGCCTGACAGCGGCAAGGAGGAGGTGGAGGCAGCGGTGGCGGCAGCTAAAGAAGCCTTCCCTGACTGGTCCGCCCGCAGCCCAGAGCAGCGAGCACAGGTCCTCAACAAGCTGGCTGACCTGTTGGAAGCCCACCTAGAGGAGTTGGCCCAAGCTGAGTCCAGAGACCAAGGTAAAACCGTAACATTTGCACGGACTGTGGACATTCCTCGATCGGCGTACAACTTCCGGTTCTTTGCGTCATCGTTGCTCCACCACACCACCGACTGCAGCCAGATGGACCACATGGGCTGCCTGAACTACACTATCCGCTGCCCTGTGGGAGTGGctggtctGATCAGCCCCTGGAATCTCCCCCTGTACCTGCTGACATGGAAGATTGCACCTGCAATCGCTACAGGCAACACAGTGGTGGCAAAACCCAGCGAGATGACCTCCGTGACTGCCTGGATGATGTGCAAGTTGATGCAGCAGGCTGGTGTTCCTCCGGGAGTAGTCAACATCGTATTTGGCACTGGGCCGAGAGCAGGCGACGCCCTCGTCGGCCATCCTGACGTCCCATTGGTTTCCTTCACTGGTTCCACGGCAACTGCCCAGCGCATCACAGAGCGGAGCGCCCCTTATTGTAAGAAGCTGTCACTGGAGCTAGGTGGTAAAAACCCTGCCATCATTTTTGCTGATGCAAACCTGGACCAGTGCATCGAGACCACGGTCCGCTCCAGCTTCTCCAATCAGGGAGAGATCTGCTTGTGCACCAGCAGGATTTATGTAGAGAGGAGCATTTACTCTGAGTTCCTGGAAAGGTTTGTGGCTGCGGCTAAGAAGTGGAAGACAGGTGTGCCCTCTGACCCCAGCAATAACAACGGAGCGCTTATCAGCAAAGAGCACCTGGAGAAgGTTCGAAGCTTCGTTGCACTCGCCAAATCTGAAGGTGGCGTCGTCCACTGCGGTGAGGGAGTTGACCAGCTGGAACTCCCTGAGCGCAACACCAAGGGCTACTTTATGCCAGCCACCGTCATCTCAGGCATATCTGACAGCTCCAGCGTCATGCAGGAGGAGATCTTCGGCCCTGTCACCTGCGTCAGCCCATTCGACACGGAGGATGAGGCCATTTCCAAGGGCAACGGCGTGCGTTACGGTCTGGGGGCCACGGTGTGGTCCCGGGACGTTGGGAAGGTTCACCGGGTGGCCAGGCGGATACAGGCAGGTATGGTCTGGACCAACTGCTGGCTGGTGAGAGATCTGAACCTGCCCTTTGGAGGGATGAAGAATTCTGGcgtggggagggagggagggaaggattCCTACCACTTCTTCACTGAGGTGAAGACCATCACGATCAAACACTGAGGGAGGAGGGAAAGAAATGGATTGGAGAAACGTGGATACAGTTTTGTAGTTAATCTTGACATTCATCAGCCTCTGTCAGCAACTCTTAGGAATTTCAATGACACGTGTCTGCTCCCACCCTCTTGGATTACTGGAGCCCGTAATTATGTCACATTTATAAAATAGCCTACAAAGAGTGGAACAATACAGATGAATATACAAGCAGAAATGCAATAGAAATGTCAAGTGAAGAGGAAATATACAGTATCACAGTGCAAAACATGCATCTCTTTTTCATTAGTAGAATATTTTTGCAATATTGAAATGCATTGAGTAGTGCGTGTTCAGCAAGCAATTTTGACAAGAGGGCATGCAAACACTGGTAATTCAAATAGAAAAGTGGAAAGGTTAGTAAAAAAGTACAGCTAGTAGAGTATGTGCCTGAGGCTAACCAAATCCAAAAAGCAAATCATTGTCCACTGGTACTTCTTCAGCTGTTTTGTAACACAACTGttgtttaaattaaaacacCTTATATAAATGCTA

Function

symbol description
aldh8a1 Predicted to enable aminomuconate-semialdehyde dehydrogenase activity. Acts upstream of or within liver development. Predicted to be located in cytoplasm. Is expressed in intestinal bulb; intestinal bulb epithelium; intestine; and liver. Orthologous to human ALDH8A1 (aldehyde dehydrogenase 8 family member A1).

NR:

description
LOW QUALITY PROTEIN: aldehyde dehydrogenase family 8 member A1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0001889 liver development biological_process
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor molecular_function

KEGG:

id description
K23234 ALDH8A1; aminomuconate-semialdehyde dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781170.1 True 2086 mRNA 0.51 7 17506954 17515583

Neighbor

gene id symbol gene type direction distance location
hbs1l hbs1l coding upstream 2080 17480198 ~ 17504874 (+)
LOC120546616 pde7b,LOC102780239 coding upstream 76952 17407774 ~ 17430002 (+)
mtfr2 NA coding upstream 115235 17378182 ~ 17391719 (+)
ppp1r14c ppp1r14c coding upstream 175587 17312474 ~ 17331367 (+)
nbas nbas coding upstream 372538 16965466 ~ 17134416 (+)
sgk1 sgk1 coding downstream 45270 17560853 ~ 17596054 (+)
slc2a12 slc2a12 coding downstream 99746 17615329 ~ 17623112 (+)
tcf21 tcf21,LOC102777283 coding downstream 136919 17652502 ~ 17654361 (+)
LOC120546414 NA coding downstream 155930 17671513 ~ 17686499 (+)
eya4 eya4 coding downstream 194216 17709799 ~ 17758414 (+)
G185067 NA non-coding upstream 37379 17468552 ~ 17469575 (+)
LOC120546214 NA non-coding upstream 53892 17449530 ~ 17453062 (+)
LOC120546618 NA non-coding upstream 59151 17430020 ~ 17447803 (+)
G185015 NA non-coding upstream 66354 17438689 ~ 17440600 (+)
G185022 NA non-coding upstream 109906 17393534 ~ 17397048 (+)
G185103 NA non-coding downstream 20271 17535854 ~ 17548289 (+)
G185107 NA non-coding downstream 34975 17550558 ~ 17551105 (+)
G185112 NA non-coding downstream 37859 17553442 ~ 17553909 (+)
G185134 NA non-coding downstream 117536 17633119 ~ 17667720 (+)
LOC120546270 NA non-coding downstream 121369 17636952 ~ 17654361 (+)
map7b map7,LOC107374525 other upstream 131895 17341837 ~ 17375059 (+)
G184996 sec63 other upstream 211253 17293654 ~ 17295701 (+)
G184859 NA other upstream 673640 16825694 ~ 16833314 (+)
si:ch211-57i17.1 LOC103363786 other upstream 727019 16765545 ~ 16779935 (+)
vegfab vegfa other upstream 820875 16671586 ~ 16686079 (+)
G185145 LOC108242497,LOC106926748,LOC106945794 other downstream 153589 17669172 ~ 17686398 (+)
LOC120546940 NA other downstream 158810 17674393 ~ 17693634 (+)
G185237 NA other downstream 401270 17916853 ~ 17917248 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other downstream 505373 18020956 ~ 18054926 (+)
znf513a znf513,LOC102795572 other downstream 611548 18127131 ~ 18140260 (+)

Expression


Co-expression Network