ccn2a (ctgf)


Basic Information

Item Value
gene id ccn2a
gene name ctgf
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 15772660 ~ 15776217 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781271.1
AGTCAGAACTCAGATCAACTCCTCTACCGAAGCTAAACTCTAGCTTTCACCAAGAAAGACTGTGACCGGAGCAGCAGAGACACGCTACGAGACAAGAGATCAACTTGATCAGAAACGGTTTCTCAAGCTCAAACTCTAAGACTAAAGGAAAACTTTCTCAACAAGACTTAAGGAAAAACTAGAATCTATTTCTACAAGGAAGAAAAGATGTCTGCTGGAATGAAGAAAATGATTTTGCTGCCTTTCCTGAGCATCATGCTCTCATACATGGCTGCAGGTCAGGAGTGTAGCAACCAGTGTTCGTGCCCCTCCACTCCCCCTCAGTGCCCCCCAGGAGTGAGCCTGGTGCTGGATGGCTGTGGCTGCTGCAGGGTGTGTGCCAAACAGATGGGGGAGCTCTGCACTGAGAAAGACTTCTGTGACCCACACAAAGGCCTCTACTGTGACTTCGGAGCCCCCGTCAACAGACGCATAGGAGTGTGCACAGCTCGAGAGGGAGCCACATGTGTTTTCGGAGGCATGATGTACAAGAGCGGGGAGTCTTTCCAGAGCAGCTGCAAGTACCAGTGTACCTGTCTGGATGGAGCCGTTGGCTGTGTCCCTCTTTGTTCCATGGACATCAGACTGCCCAGCCCAGACTGCCCCATGCCGAGACGTGTCAAGGTGCCAGGGAAGTGCTGCGAGGAGTGGGAGTGTGACAGACACAGTTTCATGGGCTCTGCTTTGGCCGcctacagagaggaggagacctATGGCCCAGATCCCTCCCTGATGAGGGAGAATTGCCTGGTTCAGACTACTGAATGGAGCGCATGCTCTAAGACTTGTGGCCTTGGGATCTCCACCAGGGTCACCAATGATAACCGTGAATGCCGCCTGGAGAAACAGACCCGGTTGTGTATGGTGCGACCATGCGAGTCACAGCTGGAGCAGAGCATTAGGAAAGGAAAAAAGTGCATCCGTACTCCCAGACTCTCAAAGCCCATGAAGTTCGAGATCTCTGGCTGCACTACCACCAAGTCCTATAGGCCAAAGTTCTGCGGCGTCTGCCTGGATGGACGCTGCTGCACCCCCCACAGAACCACCACCCTGCCCATGGAGTTCAAATGCCCCGACGGACAGGTGATGAAGAAGCACATGATGTTCATCAAGTCCTGCGCCTGTCACCATAACTGCCCCGGGGAGAACGACATCTTCGAGTCCATGTATTACAAGAAGATGATGGGAGACATGGCGTGAGCCACTGAAGGACGATCACAGCTTATGActtgaaaacaaacagaactCCATCTCATTTTGCAGCTcagtatatatgtttttttatgtttaattttcTCATTTTCTCATTGTAAAAGTATGGTCCAGACACTTGTTtaagtgtctgtttgttttgtatggCTGGCGCACATCAGCCACATAGACTCAGACAGAGGGTTGCATAGCAGCTCCAAGAGATTCCTGCACTATAACTTCTATTTTTGACAaacctactgtcaggttgctgcCCATTCCCCTTGAAATCCCCTTTACAGACCCGTCCATTTTACTGTATGCATTTTTATACATTATCTAAACCTTGACGTCCTCTCTAAATGAGGTGCCTAATAACTCCGCCCCACCCTTCGAGTCCAGACCAGACCTGGAAACTCTAAGCAGCTGTAGATGGAGCATGCAGACCACAGCAGGCCAGTGTTCCCCTGTCCAAACAGGTCTGAATGTGTccttgtatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgttagcaCAGGCCTGAATGTCAGCCTTGTCTCTGCATCTACGCTGTTCACCCTGCTCACAGAGTAGAGGAAAGGTCAGAGTTTCCGCCCCAGCATGTGATGAGAAAGCAAGCAGCGTGCTGAGTTTAAGGTTAGATATGGAACATAGTGGGCTTTTCCACcgcactgagaaaaaaaaaaaaaaaatgacatgttgaCTATTACTGATTCAGGTCAGAAGGAAGAAACCAAGTGTCTATAGGAAAAAAAGTCTATTTTGTAcaaaaatagaagaaaagaCTGGAAGAATTGTAATttcattccttttttattgttgatgtgtaaattatgtatatatttgtacaGTTTAAGTTAATTTAAAAGCCAAATTTGTTCTGTGCTTTAAAATGCATCgatagtgtatttttttttttttgtcgacagtattttttactattttattgagaagtgtgacaaaaatgttacaTGTTTCACTTTGTAGctggaaataaaatgttatattttttatacaaaCATGAGTTCTCCAATTTGTCTGTCTTTAAGTCCATGATATACACTACTATGGGATCTATTGACCAACGCCTTAAACTAAGCATACTGAACAGGCACAGGAATCACATGTTAGTGATCTGCATACTGTAACTATTACTTGTTCATGTTTAACTTTAGACATCTTTGCCAGTGCATGTATTAATTTGTAATTAACACAAAGATCACTCTCCCAGAGTGCAGGAAATCAACCTTGCTCAGTCACTACATCAAGTCTGCAGCTGAAGTGAACAAAATTGTGAAATTATTTAATCAGGTGGGAGTTTTCTTTATGATAATAAATATTGTTATATTCCCACCACAGGAATAACATATGTTGGTTTGTTCTTCCACTTTCCACTTATGTaacattatttactgtaatgccTTCTTCAGTAAACACAGacgtttaaaaaatgtataagttCTTATACAGAAAACAACATTAATAATGCACAGGACTGGTGGCTGTTTACCAAATTGCTCCTTATTGATTTGTTAGCTGAACTGAAAAAGCATAACATTGTGATTTAAATGTATTAGTTTATGCATTGATGCATGTTTTTTCTGTCATGTTTACATAAGAAAATATGGATATATGATACTGTAGGTTCTAAAGAACAAAAATTAAATGTCTCAAGGTGA

Function

symbol description
ctgf connective tissue growth factor (insulin-like growth factor-binding protein 8)

NR:

description
connective tissue growth factor-like

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0030903 notochord development biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG:

id description
K06827 CTGF, CCN2, IGFBP8; connective tissue growth factor (insulin-like growth factor-binding protein 8)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781271.1 True 3027 mRNA 0.44 5 15772660 15776217

Neighbor

gene id symbol gene type direction distance location
stx7l stx7 coding upstream 33680 15730047 ~ 15738980 (+)
zfyve1 LOC100698556 coding upstream 84933 15680461 ~ 15687727 (+)
chac1 chac1 coding upstream 168494 15602335 ~ 15604166 (+)
dll4 dll4,LOC104955063 coding upstream 174767 15588083 ~ 15597893 (+)
vrtn vrtn coding upstream 471953 15296281 ~ 15300707 (+)
tmem200a tmem200a coding downstream 77593 15853810 ~ 15877749 (+)
itpkb itpkb coding downstream 209866 15986083 ~ 16014859 (+)
coq8aa coq8a coding downstream 240758 16016975 ~ 16042239 (+)
med23 med23 coding downstream 333135 16109352 ~ 16126914 (+)
rnf217 rnf217,LOC106571519 coding downstream 564721 16340938 ~ 16352655 (+)
G184508 pigh non-coding upstream 92501 15678997 ~ 15680159 (+)
G184509 vps18 non-coding upstream 117140 15654846 ~ 15655520 (+)
G184481 NA non-coding upstream 279133 15493204 ~ 15493527 (+)
G184474 NA non-coding upstream 293580 15478491 ~ 15479080 (+)
G184465 NA non-coding upstream 449772 15322575 ~ 15322888 (+)
G184521 NA non-coding downstream 1012 15777229 ~ 15780546 (+)
G184526 sel1l,LOC104966051,LOC107585782,LOC107721334 non-coding downstream 21598 15797815 ~ 15798794 (+)
G184561 NA non-coding downstream 113148 15889365 ~ 15889585 (+)
G184540 NA non-coding downstream 149854 15926071 ~ 15927662 (+)
G184584 NA non-coding downstream 269592 16045809 ~ 16047681 (+)
dpf3 LOC100693327,LOC101467145,LOC103380755,LOC104966071,LOC102779461 other upstream 53028 15694944 ~ 15719632 (+)
rhov rhov,LOC102778135,LOC100699098,LOC101469787,LOC102306362,LOC107602886 other upstream 108999 15660573 ~ 15663661 (+)
G184458 NA other upstream 453824 15301925 ~ 15318836 (+)
LOC120546207 NA other upstream 479408 15289674 ~ 15293252 (+)
hsp90aa1.1 LOC103369948 other upstream 637800 15129476 ~ 15134860 (+)
LOC120546249 NA other downstream 138369 15914586 ~ 15968123 (+)
nkain2 nkain2 other downstream 471877 16248094 ~ 16391851 (+)
cenpw NA other downstream 603262 16379479 ~ 16381856 (+)
G184628 LOC104949332,LOC106633454,LOC101477798,LOC102792991 other downstream 623221 16399438 ~ 16404077 (+)
vegfab vegfa other downstream 895369 16671586 ~ 16686079 (+)

Expression


Co-expression Network