Gene
RNA
| Item | Value |
|---|---|
| gene id | adat2 |
| gene name | adat2 |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 31103745 ~ 31106524 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| adat2 | Predicted to enable tRNA-specific adenosine-34 deaminase activity. Predicted to be involved in tRNA wobble adenosine to inosine editing. Predicted to act upstream of or within tRNA processing. Orthologous to human ADAT2 (adenosine deaminase tRNA specific 2). |
| description |
|---|
| tRNA-specific adenosine deaminase 2 isoform X1 |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| K15441 | TAD2, ADAT2; tRNA-specific adenosine deaminase 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039781430.1 | True | 877 | mRNA | 0.51 | 6 | 31103745 | 31106524 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| batf3 | NA | coding | upstream | 83333 | 31016937 ~ 31020412 (+) |
| nsl1 | NA | coding | upstream | 89918 | 31005482 ~ 31013827 (+) |
| LOC120546900 | NA | coding | upstream | 230872 | 30863390 ~ 30872873 (+) |
| LOC120546903 | NA | coding | upstream | 253468 | 30837731 ~ 30850277 (+) |
| LOC120546902 | NA | coding | upstream | 253468 | 30845055 ~ 30850277 (+) |
| rps7 | rps7,LOC107668222,LOC107601753,LOC107726469 | coding | downstream | 389777 | 31496301 ~ 31504858 (+) |
| LOC120547349 | NA | coding | downstream | 391431 | 31497955 ~ 31498174 (+) |
| LOC120547350 | NA | coding | downstream | 392585 | 31499109 ~ 31499328 (+) |
| LOC120547351 | NA | coding | downstream | 394311 | 31500835 ~ 31501054 (+) |
| LOC120547352 | NA | coding | downstream | 397485 | 31504009 ~ 31504228 (+) |
| G188438 | NA | non-coding | upstream | 3558 | 31099842 ~ 31100187 (+) |
| G188430 | NA | non-coding | upstream | 10352 | 31087810 ~ 31093393 (+) |
| LOC120546487 | NA | non-coding | upstream | 16905 | 31083471 ~ 31086840 (+) |
| G188421 | NA | non-coding | upstream | 82791 | 31020581 ~ 31020954 (+) |
| G188353 | NA | non-coding | upstream | 289960 | 30783618 ~ 30813785 (+) |
| G188427 | NA | non-coding | downstream | 4130 | 31110654 ~ 31162056 (+) |
| G188450 | NA | non-coding | downstream | 83878 | 31190402 ~ 31251118 (+) |
| G188719 | NA | non-coding | downstream | 244924 | 31351448 ~ 31355505 (+) |
| G188736 | NA | non-coding | downstream | 351897 | 31458421 ~ 31458701 (+) |
| G188737 | NA | non-coding | downstream | 366253 | 31472777 ~ 31472998 (+) |
| G188352 | NA | other | upstream | 221299 | 30611681 ~ 30882446 (+) |
| LOC120546905 | NA | other | upstream | 291293 | 30794219 ~ 30812452 (+) |
| angel2 | NA | other | upstream | 767543 | 30324972 ~ 30336202 (+) |
| btbd9 | btbd9 | other | upstream | 1006506 | 30084548 ~ 30097239 (+) |
| G188296 | LOC107662224,LOC107746645,LOC107750038,LOC107712283,LOC107663761 | other | upstream | 1457922 | 29645254 ~ 29645823 (+) |
| hivep2a | LOC103373864 | other | downstream | 62543 | 31169067 ~ 31309396 (+) |
| LOC120546816 | NA | other | downstream | 499530 | 31606054 ~ 31614522 (+) |
| LOC120546196 | LOC105017826 | other | downstream | 670439 | 31776963 ~ 31782066 (+) |
| myo6a | myo6,LOC103369425 | other | downstream | 1469932 | 32576456 ~ 32767003 (+) |
| mei4 | NA | other | downstream | 1859314 | 32965838 ~ 33041169 (+) |
