LOC120546516


Basic Information

Item Value
gene id LOC120546516
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 33231034 ~ 33238327 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781465.1
GTCTGCTGCCTTGTGAAAGGAATCATCCGTGGTATTTTTGGTTGAAAAGATACCCAAATGTCTccaaaataaatacagagaTCTTTGAAAACGAGTCAAATTTGATCCAATGACAACAGCAGGCTTGAACAGGGTTTCTATTCCAGTATAtaatgttctctgtgtgtgtaacatctCCGACGCAGAATCTTCCGAgcagcacttgaaggcagcgCTGCAGAGAAGACAGCAGAAGGGGAGATGTAGCTGTGGAGTTTGCGTCAGTCTGATCTGAGATCTGCGAGCCATGGAGGGCGGAGGAGGACTGTCGGACGAGGCCGCGGCTGCTGCCTGCAAACAGGGAGACCCCATCACCACGGACTACATGCTGCAGCAGACGAATCTGCGGGTCAAAGATCCCGCCAGATCTCTGGACTTCTACACCCGAGTCCTGGGCATGACcctgctCCAGAAAATCGACTTCCCCTCGATGCGTTTCACCCTCTACTTCCTGGGCTTCGAGAAGAAGTCGGACATCCCGGCCGACATCAAAGAGCGAACGGCGTGGACCTTCTCTCGCCACGCCACCATAGAGCTCACACAtaACTGGGGCTCAGAGTCCGATCAAAGTCTGGCGTACCACAACGGGAACACCATGCCCAAAGGATTTGGGCATATCGGCATCTCTGTTCCTGATGTTCAGGCCGCCTGCAGAGTGTTTGAAGAGCAAGGAGCCACGTTCCTCAAGAAACCCCAATCTGgtaaAATTAAGGGTCTGGCCTTCATCCAGGACCCTGATGGATACTGGATTGAGATCCTAAACTCTAACAAAATGGTCTCACTAATGTCCCCTCCAGTCACAGACACACCGGGGGGGAATATCCAGACCACCGCGGTCGGAGAACCACAGAAGAAGACTGAAACTTTAAATGACAAACCCGTTATTGTCAAAAACTCAGTTTGAACGTTGCAAAGCCCCCGTTAGACATTTAGGG

Function

GO: NA

KEGG:

id description
K01759 GLO1, gloA; lactoylglutathione lyase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781465.1 True 974 mRNA 0.51 6 33231034 33238327

Neighbor

gene id symbol gene type direction distance location
bub1 NA coding upstream 2195 33201405 ~ 33228839 (+)
nt5e NA coding upstream 103443 33099369 ~ 33127591 (+)
senp6a NA coding upstream 661757 32535735 ~ 32569277 (+)
cd109 NA coding upstream 1085124 32111590 ~ 32145910 (+)
crnkl1 crnkl1 coding upstream 1125374 32093951 ~ 32105660 (+)
LOC120546153 LOC103369399 coding downstream 41584 33279911 ~ 33286940 (+)
LOC120546181 adgrg6 coding downstream 391473 33629800 ~ 33666253 (+)
LOC120546767 LOC103364257,LOC107092024 coding downstream 770069 34008396 ~ 34013448 (+)
LOC120546447 NA coding downstream 780304 34018631 ~ 34035953 (+)
LOC120547053 NA coding downstream 798729 34037056 ~ 34052641 (+)
G189156 NA non-coding upstream 46197 33178754 ~ 33184837 (+)
G189152 NA non-coding upstream 77568 33153225 ~ 33153466 (+)
G189143 NA non-coding upstream 84441 33134521 ~ 33146593 (+)
G189147 NA non-coding upstream 87487 33140603 ~ 33143547 (+)
G189136 NA non-coding upstream 136754 33093849 ~ 33094280 (+)
G189167 NA non-coding downstream 371 33238698 ~ 33239145 (+)
G189171 NA non-coding downstream 15336 33253663 ~ 33254113 (+)
G189219 NA non-coding downstream 48651 33286978 ~ 33287313 (+)
G189218 NA non-coding downstream 49534 33287861 ~ 33288937 (+)
G189228 NA non-coding downstream 55493 33293820 ~ 33352523 (+)
mei4 NA other upstream 189865 32965838 ~ 33041169 (+)
myo6a myo6,LOC103369425 other upstream 464031 32576456 ~ 32767003 (+)
LOC120546196 LOC105017826 other upstream 1448968 31776963 ~ 31782066 (+)
LOC120546816 NA other upstream 1616512 31606054 ~ 31614522 (+)
hivep2a LOC103373864 other upstream 1921638 31169067 ~ 31309396 (+)
pex7 pex7,LOC102797744 other downstream 89765 33328092 ~ 33386989 (+)
LOC120546192 slc35d3,LOC102797457 other downstream 161474 33399801 ~ 33416086 (+)
G189269 NA other downstream 215669 33453996 ~ 33458768 (+)
G189309 NA other downstream 403293 33641620 ~ 33685556 (+)
LOC120547364 NA other downstream 525138 33763465 ~ 33763626 (+)

Expression


Co-expression Network