fam167ab (fam167a,LOC102799533)


Basic Information

Item Value
gene id fam167ab
gene name fam167a,LOC102799533
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17800090 ~ 17808692 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781499.1
GCAGTAATATTCATGCGGCGGGAAGTCTGATAGGGATTCCTGGGACGTCTCCAAGCAACCTGAACCTGACGCAACCATGTTCCCGCCCCTCCTCCGGTAGCtctctgttaaaaaaacaagtggACCGTGTAGCAGTTAGGGATGATATGAAAGAGAGAGCGGGCTCGAGATGGTCTTCGTTTATGTCGCTGCTTGAACTACAAAGTTGGACTGCTGCAGGGGGATTCTTACAAGATCTAAACATACTCTGCCTCCGAAACACAAATGGAGCTATCAAGGAACTTTAAAGAAAGACAGTAAATGCAGGAAGGACAAAAACCTACAACTATGGTCATTTGTAAAAACGAAAGAGGCCACCAATGAAGAGCAGATATcttttatctatttttattttgacacttttttttttttaaggagcgTTTTGTATTTAGCAGATTAATGATGGAAACTCCCTCAGCTCCTCAGATTATTGTGGACAAGACTAGTGTCCTGGAGGAAGCAGAATGTGGGGAGGACGTGGATCTGCCTACTGATGACCATCTCATGAACTTGAAGGCCTTGACGGAGAAACTAAGACTGGAGACTAGGAGACCTTCTTATCTGGAGTGGAAAGCCCGACTCGAGGTGGAAAGCTTCAGAGAGTCCAGAATTGAAAAAGGCCCAATCCAATTGGAACCTGAGGGGGAAATTGTCCCCCCCAAAGAGACTGTAGTGAAGTCTGATGTGATTCAGTGCAAGTTGCCATCAGGTGTACTGAAGGGATTCGGGAACATAGATGAAGCTCTCTGTTGGCTGAGGAGAGAACTGACAGACATGCGCTTGCAGGACCAGCAGCTGGCGAGGCAGCTGATGCGGCTCCGCAGCGACATCAACAAGTTAAAGATAGAGCAGACGTGCCACCTGCATCGCCGGATGCTCAATGACGCCACCTTTGGCCTGGAGGAGCGGGACGAGCTGTCGGACCTGCTGTGTGAGTGTCCAGTCACCCCGGGGCTCGGCCTCTCGGCCCCGCTGAGACTCATCGGCGTCACCAAGATGAACATTAACTCTCGCCGCTTCTCGCTCTGCTAGTGGCAGTGATGCCACTCCGGGCAGAAAATCCTGAAAACACAAAAGCCTGTCTAATACTATCTTTGCTCCTGGCCATTTGTTAGATTGTGGTGAAATCCTTTTGACCACAATGTTGTGAGGATAAACCCAGATGGAAACTCGTTTTACAGTCCCTATAATCAAAGAGAGAGATTTAGGTCATGTATATTATTTAGAAAGACAAATTTAAGTGTAGTAGGTACATATATAGTGTGTTTGCCACTAAACTATACATGGCAGCTATATACAGAAACCTCTCTGTCCTAAAACCGCAGAAGAGTTTAGACCTTTAGGCCATTATGACTTGAAATAGAATACATACTGTTTTTCAACTACAGAATAGAAATCTCAAGCTTATTCCTGTCCACTTTTTAAGCCTTATCAGTTTTACTGTTACCCTATATATTTCCATATATGTTGGTTGTTTGCTGGGACTGTTTTGCTGGGTTTTATCTACAAACTAAAATAATCAAGCACAGattaaatatttacatttattcgTATACAGACCTGTCTGTATGATGTTTTCAGTGACAGTCaagaatatgtttttttccacgTCCTGCATCTTAATCTAAAAGCTTGTGCTTTGATAAAGGCAAAAAAATGCCTTACTATTGATACAAATTGTATACTATACCCAATGCATATTTAAGCGAGTAGTTGCATCAATTTAGCAAGGACTGCTTTTTTTGTAGACTATGATGAAAATGATTTATTCTTTATAATGATTGTCATATTGCACTAGTTGGGGATCTCATTATGGTTTGCTGAAGTTTGCTTCTTATAAGTAAAGATGGATTTAGCTCTTGGTTGGAGCTTTGTCCTTTTTATGCTGTAATTATTGAGTTCCAGCCAGGAACTAACCATTTTAGGTGGCATTGTTTGTCTGAACGAAAACCATGGTTTAGTTTTACAGATAAACATTGAAGTCTTCTAGTGTGTACCAAATGACATGATTAAGTGGATCTTGTTATGAGCCTTCTGTTGTATTTGCAGTTATGATGGGATATATCCTTCCATACTACTTTTCTTTGTGGGGGGTTTGCATTTGAAATGTGAGCATATGAGTTAAGTATAGTCCTGAGTGTCAGGGTTTGAGATGCCCCTCCTTGTGGCCCAGATATTCTAGAATACAATCTGAACAAAACCAGCGCTTTAAAGCTCTCTCACACACCACATCTAATTTGTCTGCAACAACAGTGGTACCAATAGAGTTTTAACAACCACTGAAATGACGAGGTTATCACTGGTGTCTACACAGCTCAGACTACTCCAACATTATAGGATTAGCTTTTTGGTCTTTGTCTCAGTTTGACAAAGACTGTATAGTGTCCTCTATACAGTGAGCCACAATGCCACCTTGTGTTACTGAGCCTATAATGACTGGAAAATACCTTAAAAGTGGTTTGGTAGAATCCGATACCTTAAATGGGCTGTTGTTAGTGCTAGTATGATGACACAAATGTACTGGAAATAAATAACCCATGAAGAA

Function

symbol description
fam167a Orthologous to human FAM167A (family with sequence similarity 167 member A).

NR:

description
protein FAM167A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781499.1 True 2584 mRNA 0.42 3 17800090 17808692

Neighbor

gene id symbol gene type direction distance location
lca5 LOC104965141 coding upstream 142 17791853 ~ 17799948 (+)
eya4 eya4 coding upstream 41676 17709799 ~ 17758414 (+)
LOC120546414 NA coding upstream 113591 17671513 ~ 17686499 (+)
tcf21 tcf21,LOC102777283 coding upstream 145729 17652502 ~ 17654361 (+)
slc2a12 slc2a12 coding upstream 176978 17615329 ~ 17623112 (+)
mtmr9 mtmr9 coding downstream 79949 17888641 ~ 17904513 (+)
tdh LOC108242421,LOC106524872,LOC104962272,LOC104922441 coding downstream 98049 17906741 ~ 17913030 (+)
pinx1 LOC102299901 coding downstream 110886 17919578 ~ 17949445 (+)
sox7 sox7 coding downstream 143867 17952559 ~ 17955598 (+)
LOC120546768 NA coding downstream 167421 17976113 ~ 17993998 (+)
G185156 NA non-coding upstream 35298 17763969 ~ 17764792 (+)
G185155 rps12 non-coding upstream 36354 17760676 ~ 17763736 (+)
LOC120546941 NA non-coding upstream 111810 17686696 ~ 17688280 (+)
LOC120546942 NA non-coding upstream 128613 17669166 ~ 17671477 (+)
G185136 NA non-coding upstream 138277 17640961 ~ 17661813 (+)
G185254 NA non-coding downstream 248719 18057411 ~ 18059367 (+)
G185258 LOC104959833,LOC107082730,LOC103138645,LOC106923247,LOC106920026 non-coding downstream 294333 18103025 ~ 18104904 (+)
LOC120546825 NA non-coding downstream 347278 18155970 ~ 18164654 (+)
G185323 NA non-coding downstream 372440 18181132 ~ 18181983 (+)
G185353 NA non-coding downstream 489171 18297863 ~ 18298151 (+)
LOC120546940 NA other upstream 106456 17674393 ~ 17693634 (+)
G185145 LOC108242497,LOC106926748,LOC106945794 other upstream 113692 17669172 ~ 17686398 (+)
map7b map7,LOC107374525 other upstream 425031 17341837 ~ 17375059 (+)
G184996 sec63 other upstream 504389 17293654 ~ 17295701 (+)
G184859 NA other upstream 966776 16825694 ~ 16833314 (+)
G185237 NA other downstream 108161 17916853 ~ 17917248 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other downstream 212264 18020956 ~ 18054926 (+)
znf513a znf513,LOC102795572 other downstream 318439 18127131 ~ 18140260 (+)
ylpm1 ylpm1 other downstream 789673 18598365 ~ 18635052 (+)
LOC120547227 LOC104932566,LOC103364615 other downstream 897164 18705856 ~ 18711994 (+)

Expression


Co-expression Network