LOC120546559 (LOC102791590)


Basic Information

Item Value
gene id LOC120546559
gene name LOC102791590
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 16487014 ~ 16490639 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781549.1
cgctccagttttttttttttttttttaaagtaaatgaTGGAAGCCAGTCTGCTGGAAGCCGTTTGGATGGAGAGGATTTCTTATTAATGAGAAGGACAACATTTACTGGAAGTTTAAATTAATGTTTTCAGTGGGATGGGACTCAATCACTTCCTGTGTCTGCTGCTCTGTGCAGCAGCCCTGACAGTTTCTGGAGTTTTTGCTAAAGATGAGAACAGCGAGGCGAACAGGTGGGCCAGGCAGAGCCTCCCGGTgctgctggacacacacacggtgCCTTTAGACACCCCTTTGTTCACAGGGCAGCAGGAGgataaggagagaggagggacaaAGACACTCTGTGGAATAGAGTGTCAAAGTAGCCTACCACCTTTGGACCAGACTGAGCAAGAGAGGATTCTGGGATATGAGACAATGTATGAGAATGGCACTCGCACACATACAGATATCAGTTTGCAGGCTTTCAACAAGACGTCTGCAGGAGCACCAGCCCACTCACCAGCTCGCACTCGCAGGAAACGGCAGGTTTATGGAGCAGATGGACGCTTTGTGATCTCTGACTTGTATTTCATCACCAACTATCCCTTCTCTACCGCTGTTCGTCTCTCCACTGGCTGCTCTGGAGTCCTGATATCCCAGAAACACGTGCTAACAGCGGCACACTGCATCCATGATGGGAGGGACTACCTAGGGAGTGCCAGAAGGCTTAGAGTTGGGGTGTTGCAGCTCAAGACTAAAAGTAGAAGAGGGGgtaggaggagaggagggcggCGGAGGGCTGGGAGGAAAGAAGATGGTGAGGAGCAGGTAATGGAGGAAGGTGAGGAGCAGAATAGTATAGATGGAGATGTAGTGAGAAGGAGAAAGGGAGGCAAAGGCAGGAGACGCAGGGGAAGAAAAGAGGGTGAGGAGGGTGTAGCTGAGttagagagagaagggaaacaAAGAAGTCTCAGCCGTATAAAACGTAGTACTGAACCCCAGAAGCAGCCTGTCTTCCGTTGGACACGAGTCAAACAAACCAGAATCCCTCAAGGATGGATCCAAAACAAGAGCTCCACCAACTCAGTGTCCCCTGACTATGATTACGCTCTCCTGGAGCTGAAACGGCCCCTCAAACAAAAGTACATGGAGCTGGGAGTGGCGCCCTCTGCCACCCCCCTGACACGGATCCACTTCTCAGGCTATGACGCCGACAAAAGCCTGCTGGACGGGCGTGGAAATGAGAAGGTGGTTTACCGGTTTTGCTCGGTGGCAAACACGTCTGACGATTTGATGTACCAGCGCTGTGACGCTCAGCCGGGCGCCACGGGAGCAGGTGTTTACGTTCGTCTGAGGCAGGAAGTGGGAGAGGAAGGCAGGAAAGGGAAGTGGCAGCGGAGAGTGATTGGGGTGTTTACAGGCCATCAGTGGGTGGAGGTGGAGGGCGGTGAGCAGAGGGACTTTAATGTTGCAGTGAGGATTACTCCACCCAAATATGCCCAGATCTGTCACTGGATCCATGGAGATCCAAGTCTCTGCAAAGAGGTTTGACTGCAAAGCGAtggatctagaaaaatatttgtTGTCAGTTTCAAAGAGACTCAAAGATCTGGGCTGAGTGTACagtataaaactttttttttttaagtcttaaGAATGGTTCTGAACTTTGACTTATGACTTGAATTTATTTTAGTAAAAACTAGGACTTAGAAACTTTGTACAAAGAAGCTAACTTTTTAGCAAAGTATGAGTGTGAATCCTAAGTGCAGACTGAAGTGTTGTCAATTAAGGACTACAATCATGTCTTCCCAAAATGCACTTCCTGAAGCACTTCTGCTAAAAGCACGCCTCAAAAGGTTATATGTCATGGCTGCATCACAGCTTCATGCTTGATGCACACCTTgtcataattaattaataattatatatacgCCAAATATATTGCAGCCTGCAAGAAGAAAGCTTATAGAAGCATAATGACGATGTTAATAAGTGCTGTTTTGGGGTATTTTAAAAATCCTAAATGAGTTCATGAAGAACATAATAACCATTTTAAGACATACTTATCTGTGGAGGCACcatcaaatgttttttatatGAATTAAGTAAACGTTTAATAGTTTATTTCCCCcccgaaaaaaaaaagcacatcatTACTATCATGTCATTACATGTTGTATAAGAGTGTGGGTATTAGAACAGATGTATCTTTTATTAATTATCATCCTACATTTCCAAAATATGGAAAGTGTGTAACCACTGCCTCAGCTGGTCACTCCTAACTAATGTAGCAGACCTCTGGAGCTGTTTGGAGTAATtataaaaccaagtcttaacacTTAATATTATTCATACATGGCACTTATTCTTAAGTGTAAGAATAAGAACAAAATTACTGTAATTTTTGACACATTCAAGACCAAAATTTCACTCTGAGCAGCATCATACATACCAGCCCTGGAATTTTGATCGGAGTTTGTCAGGCAAATCTAAATCCAGGAATGCTGCACATGTCCATGGTTCTGGATCTGTGGCCTGTTCAGCCATTTATCAGTTCATTAAGAGGATATAGGCAATCCTTGTGAATGAGTCACAAAGggctaaaaaaaacatgagaaagtGTTTGAATTTGAGTTTCCTTGTCACCTTTTCTAAAAATCacatttgtttgtctgtctctgaaaTACCTAACGTACAGTATATAACTCTGAATctttaattatgtaaaaaaagaaaagacaaaacccTATTTTTTATCCTATGTTGCACAATGTAGACATTTTGCTTTGTTTAATTTTGTATCGAAACATACATAAGTGAAACCTGTTGGTCCTCATTTCACTTCATGTTAAAGGAATACTGGGTCCACACAACATATATACGTATTTTCTAATGTTTATAATATCTTGTATTGTaattttgtcttattttttaactgaaattgtcatgccacaAACATACTTTCTTGTCAAAAGAAAGAATTCATGctgacaacaaataaaaaagcagAACAGTAAGTGATAA

Function

NR:

description
PREDICTED: inactive serine protease 35-like, partial

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781549.1 True 3012 mRNA 0.42 2 16487014 16490639

Neighbor

gene id symbol gene type direction distance location
LOC120547268 rnf146 coding upstream 96384 16387758 ~ 16390630 (+)
LOC120547267 NA coding upstream 100236 16384271 ~ 16386778 (+)
tpd52l1 tpd52l1 coding upstream 111800 16357559 ~ 16375214 (+)
rnf217 rnf217,LOC106571519 coding upstream 134359 16340938 ~ 16352655 (+)
med23 med23 coding upstream 360100 16109352 ~ 16126914 (+)
pgm3 pgm3 coding downstream 27805 16518444 ~ 16523666 (+)
ccnc ccnc coding downstream 37350 16527989 ~ 16534031 (+)
faxca LOC104925628,LOC104963907,LOC103380784,LOC102789719,LOC101473580,LOC102289837 coding downstream 45672 16536311 ~ 16544495 (+)
tmem63a LOC104944870 coding downstream 98211 16588850 ~ 16599462 (+)
rsph9 rsph9 coding downstream 114747 16605386 ~ 16609726 (+)
G184633 LOC101069623,LOC100711363,LOC102312356,LOC101478077,LOC102202636 non-coding upstream 73513 16411676 ~ 16413501 (+)
G184618 NA non-coding upstream 130466 16291211 ~ 16356548 (+)
G184584 NA non-coding upstream 439333 16045809 ~ 16047681 (+)
G184540 NA non-coding upstream 559352 15926071 ~ 15927662 (+)
G184561 NA non-coding upstream 597429 15889365 ~ 15889585 (+)
LOC120546561 NA non-coding downstream 2555 16493194 ~ 16516333 (+)
G184796 NA non-coding downstream 105301 16595940 ~ 16610380 (+)
G184851 naga,LOC104944830 non-coding downstream 234238 16724877 ~ 16726392 (+)
G184948 NA non-coding downstream 443057 16933696 ~ 16956864 (+)
G184995 NA non-coding downstream 790476 17281115 ~ 17299420 (+)
G184628 LOC104949332,LOC106633454,LOC101477798,LOC102792991 other upstream 82937 16399438 ~ 16404077 (+)
nkain2 nkain2 other upstream 95163 16248094 ~ 16391851 (+)
cenpw NA other upstream 105158 16379479 ~ 16381856 (+)
LOC120546249 NA other upstream 518891 15914586 ~ 15968123 (+)
dpf3 LOC100693327,LOC101467145,LOC103380755,LOC104966071,LOC102779461 other upstream 767382 15694944 ~ 15719632 (+)
vegfab vegfa other downstream 180947 16671586 ~ 16686079 (+)
si:ch211-57i17.1 LOC103363786 other downstream 274906 16765545 ~ 16779935 (+)
G184859 NA other downstream 335055 16825694 ~ 16833314 (+)
G184996 sec63 other downstream 803015 17293654 ~ 17295701 (+)
map7b map7,LOC107374525 other downstream 851198 17341837 ~ 17375059 (+)

Expression


Co-expression Network