LOC120546620


Basic Information

Item Value
gene id LOC120546620
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 14427564 ~ 14439516 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781685.1
TTTATCCAATAATTTTCGCTAAATTCATCCTTCCAGCTACTCAGGCTTGCCTGCACTGTAACCTATATAACTCTGTGGATGAACAAGATGTTTACTGCGGCGCAGCACAAGAACAAGCCACATATCAGGTTTATCTCTGCTGTTTCCTCCCAGTGTCTCCATCTCTCATAGTGACATGGGGTTTATGTGTGGGGGCGTGGTCAAAGGGGCTCAGTCTGAGGGATTATCATTGTAGtctgcaaccccccccccccacacacacacacacacacacacacgcacacacacacacatgcaagtacatgcacacacacgtgcacagacAATTTAGGCTGAATTGGATGACCACTGAGTTTTTAAGCATTATTAACCCCACCCCCACCTTTATATAagcgcacaccctgagcaaaaGGGCTTTAAGCGCTGTCATACACATCACTGCGTCCCAGAGTGTGTCAGGCGACCACCAAGGAAACAGAATACTGCAGATACTGTAATACTGCTTGGATGCTGTAAACAGAGGCGGACAAAACACCAGAAAGGcagctctgtgagtgtgtgtgacatAAGTGGAGCAAAGAAGATAAGATCTTAGTGGACACCAGCCAGTGGATCATAATCAGATGGAGGGCGAGCCGGCCTATCTGACTGGAgccagaggaggaaagagaagcGAGAGAGTGTGCTGCTCgcgagaggagaggaagaggaggaagacgtCGGGTGTAGTGGAGGAGGGCCCAACTGGCCAGCAGAGGAACCCTGACTACTCATCAGTGTCCAGTGTCTCCCACGATGACCGCAGCTCGGCAGCCAGTGGCCTGGACGTGGCCGACCGGCTGACCTACCTGGAGCAGAGGATGCAGATGCAGGAAGATGAAATCCAGCTGTTGAAGATGGCTCTGGCTGATGTCCTCAAGAGGCTCAACATATCTGAGGAGCACCAAGCAGCTGCTGCCTCTGGTGCTGTTAGGAGACCATCAGGCGTTAAAGCCCGGCCAGTGTCTCTACTTCTGCCCTCCAAACCGCCTATGGTGATCTCCAGCACTGCCTCCCTGAAGAAGAGCTCCACGCTGCCCTCCAGCGTCCCAGCCAAGAACTACAGCCCAACACCGCCCGGCAGtGGTGTGAAGAGCCCCCCGGGTAGTGTGAAGGACAGTCCATGCAAGACCGCTAAACGACTCACCTCTGCAGCCTCCACCTGTAAGAAACCTCCGGAAGGCAGCAAGTCCAAGGAGAGTGCAGTAAGTGTCGGGACAAGGCGTGTGACACACTGCAAAGTGACTATGCAGATCTATCTGAGCCCCCTCACAAGAAAGACTGGATCTTCTGAGACCGCCAAATCCCCCGCCGCTGTGCCTGCCAACAGAGGGCCCACGGCCACACCTAACAACCCTCAGGCAAGGGGGGGCAGCAAGCTAGAGGGAAAGAAGACGACCCCGTCCTTCACCTTAAACCTGCAGAAAACCACAACCAGCCAGAGCACAGCGCAGGACACATCCAGCTACAAGAGCCCCCTCAAATCACCCAGCCAGTACTTTCAGATTTGTTACTGAGGGTAGAGATAGATTTTCTACACCTTTGTCCGTGCTATCAATCACTTGAACAGAAACTGTGAATAAAGACTTTCTTCCATTGTTGATAAAAAAGAGAATCTGATTTTAAAATGGGGATGAGTGCACTTCTGACACGATTTACCTCTTTAGTGCATCCTGACTTTGTTGCTTTTGGGTATGTGTACAGCATTTCAAAACATTTCCAAGTTTGAGTAACTGTGAATAGTGCTTTATGGCATGgctatttattaaaatgataGTACCGTTTGAGagcttaaatgtatttttagccTCCTCTAAGACCACAGCAGGCATAGATCCAGTTctcactgctgtgtgtgtaaacattttctttgtcattctATATGTGAATTTTGTAAAGCAAGGATGTGTCTGTAGTTTTCATTCAGCACTGACTGTGTTTGATGTCACTGAGTCCGTCTCATTCCTGTGTgctgtgatgtttcctgttgttTTGTAGTTAATGTTACACTTTCAGTATAACTTAAGTACAGAGTGTACCAgaatcagtaaaaaaaaaggctcaTTCTAGTTCaggacaaaaaataaaagaactATGATCACCAA
>XM_039781686.1
TATCCAATAATTTTCGCTAAATTCATCCTTCCAGCTACTCAGGCTTGCCTGCACTGTAACCTATATAACTCTGTGGATGAACAAGATGTTTACTGCGGCGCAGCACAAGAACAAGCCACATATCAGGTTTATCTCTGCTGTTTCCTCCCAGTGTCTCCATCTCTCATAGTGACATGGGGTTTATGTGTGGGGGCGTGGTCAAAGGGGCTCAGTCTGAGGGATTATCATTGTAGtctgcaaccccccccccccacacacacacacacacacacacacgcacacacacacacatgcaagtacatgcacacacacgtgcacagacAATTTAGGCTGAATTGGATGACCACTGAGTTTTTAAGCATTATTAACCCCACCCCCACCTTTATATAagcgcacaccctgagcaaaaGGGCTTTAAGCGCTGTCATACACATCACTGCGTCCCAGAGTGTGTCAGGCGACCACCAAGGAAACAGAATACTGCAGATACTGTAATACTGCTTGGATGCTGTAAACAGAGGCGGACAAAACACCAGAAAGGcagctctgtgagtgtgtgtgacatAAGTGGAGCAAAGAAGATAAGATCTTAGTGGACACCAGCCAGTGGATCATAATCAGATGGAGGGCGAGCCGGCCTATCTGACTGGAgccagaggaggaaagagaagcGAGAGAGTGTGCTGCTCgcgagaggagaggaagaggaggaagacgtCGGGTGTAGTGGAGGAGGGCCCAACTGGCCAGCAGAGGAACCCTGACTACTCATCAGTGTCCAGTGTCTCCCACGATGACCGCAGCTCGGCAGCCAGTGGCCTGGACGTGGCCGACCGGCTGACCTACCTGGAGCAGAGGATGCAGATGCAGGAAGATGAAATCCAGCTGTTGAAGATGGCTCTGGCTGATGTCCTCAAGAGGCTCAACATATCTGAGGAGCACCAAGCAGCTGCTGCCTCTGGTGCTGTTAGGAGACCATCAGGCGTTAAAGCCCGGCCAGTGTCTCTACTTCTGCCCTCCAAACCGCCTATGGTGATCTCCAGCACTGCCTCCCTGAAGAAGAGCTCCACGCTGCCCTCCAGCGTCCCAGCCAAGAACTACAGCCCAACACCGCCCGGCAGtGGTGTGAAGAGCCCCCCGGGTAGTGTGAAGGACAGTCCATGCAAGACCGCTAAACGACTCACCTCTGCAGCCTCCACCTGTAAGAAACCTCCGGAAGGCAAGTCCAAGGAGAGTGCAGTAAGTGTCGGGACAAGGCGTGTGACACACTGCAAAGTGACTATGCAGATCTATCTGAGCCCCCTCACAAGAAAGACTGGATCTTCTGAGACCGCCAAATCCCCCGCCGCTGTGCCTGCCAACAGAGGGCCCACGGCCACACCTAACAACCCTCAGGCAAGGGGGGGCAGCAAGCTAGAGGGAAAGAAGACGACCCCGTCCTTCACCTTAAACCTGCAGAAAACCACAACCAGCCAGAGCACAGCGCAGGACACATCCAGCTACAAGAGCCCCCTCAAATCACCCAGCCAGTACTTTCAGATTTGTTACTGAGGGTAGAGATAGATTTTCTACACCTTTGTCCGTGCTATCAATCACTTGAACAGAAACTGTGAATAAAGACTTTCTTCCATTGTTGATAAAAAAGAGAATCTGATTTTAAAATGGGGATGAGTGCACTTCTGACACGATTTACCTCTTTAGTGCATCCTGACTTTGTTGCTTTTGGGTATGTGTACAGCATTTCAAAACATTTCCAAGTTTGAGTAACTGTGAATAGTGCTTTATGGCATGgctatttattaaaatgataGTACCGTTTGAGagcttaaatgtatttttagccTCCTCTAAGACCACAGCAGGCATAGATCCAGTTctcactgctgtgtgtgtaaacattttctttgtcattctATATGTGAATTTTGTAAAGCAAGGATGTGTCTGTAGTTTTCATTCAGCACTGACTGTGTTTGATGTCACTGAGTCCGTCTCATTCCTGTGTgctgtgatgtttcctgttgttTTGTAGTTAATGTTACACTTTCAGTATAACTTAAGTACAGAGTGTACCAgaatcagtaaaaaaaaaggctcaTTCTAGTTCaggacaaaaaataaaagaactATGATCACCAA
>XM_039781687.1
GTTACTCATCGTTTCCTCCTCAGAGCAGTAGCTTATCTTTCCGGGAGTTATTTTGGGGCCTTTAATGTGAAGATGTTTTCCCTGTGTGAGGCCTCCCTGACCCCTGTCGACACACTGGAGCACTCTCTCGCACACATTCTTACTTGTCCTCCTCTGAGCTTCAGATGGCTTACCAGGTCCTTAATCTGTCCTCTGAGTGAcatccccccctctccctgcaCCCTGCACACACTCCTGGCAGGACagcagaggggagagggagggacgGATAGCAATAGGTGGTGGCCTCTGGTGGTTTAGTGAAGGTGAACTAACCCAGCAGTGAAGCGTAGGAGACATAGCAGGAGCACGCTCCGACACTCTCTGTCAGGGCCATGGCAGCAGGCATAgaggagggacacacacacatggaggagCTGGTGGACCAGGGCCTGGGGATGGAGGAGACGGCCCACGGCCTGCTGGGGAGGCCCTCGCTGAAGGAGAACTACAACAGTGACTGCCTGCTGGCACCTGACACTGACTTCATGACAGATGACCGCAGCTCGGCAGCCAGTGGCCTGGACGTGGCCGACCGGCTGACCTACCTGGAGCAGAGGATGCAGATGCAGGAAGATGAAATCCAGCTGTTGAAGATGGCTCTGGCTGATGTCCTCAAGAGGCTCAACATATCTGAGGAGCACCAAGCAGCTGCTGCCTCTGGTGCTGTTAGGAGACCATCAGGCGTTAAAGCCCGGCCAGTGTCTCTACTTCTGCCCTCCAAACCGCCTATGGTGATCTCCAGCACTGCCTCCCTGAAGAAGAGCTCCACGCTGCCCTCCAGCGTCCCAGCCAAGAACTACAGCCCAACACCGCCCGGCAGtGGTGTGAAGAGCCCCCCGGGTAGTGTGAAGGACAGTCCATGCAAGACCGCTAAACGACTCACCTCTGCAGCCTCCACCTGTAAGAAACCTCCGGAAGGCAGCAAGTCCAAGGAGAGTGCAGTAAGTGTCGGGACAAGGCGTGTGACACACTGCAAAGTGACTATGCAGATCTATCTGAGCCCCCTCACAAGAAAGACTGGATCTTCTGAGACCGCCAAATCCCCCGCCGCTGTGCCTGCCAACAGAGGGCCCACGGCCACACCTAACAACCCTCAGGCAAGGGGGGGCAGCAAGCTAGAGGGAAAGAAGACGACCCCGTCCTTCACCTTAAACCTGCAGAAAACCACAACCAGCCAGAGCACAGCGCAGGACACATCCAGCTACAAGAGCCCCCTCAAATCACCCAGCCAGTACTTTCAGATTTGTTACTGAGGGTAGAGATAGATTTTCTACACCTTTGTCCGTGCTATCAATCACTTGAACAGAAACTGTGAATAAAGACTTTCTTCCATTGTTGATAAAAAAGAGAATCTGATTTTAAAATGGGGATGAGTGCACTTCTGACACGATTTACCTCTTTAGTGCATCCTGACTTTGTTGCTTTTGGGTATGTGTACAGCATTTCAAAACATTTCCAAGTTTGAGTAACTGTGAATAGTGCTTTATGGCATGgctatttattaaaatgataGTACCGTTTGAGagcttaaatgtatttttagccTCCTCTAAGACCACAGCAGGCATAGATCCAGTTctcactgctgtgtgtgtaaacattttctttgtcattctATATGTGAATTTTGTAAAGCAAGGATGTGTCTGTAGTTTTCATTCAGCACTGACTGTGTTTGATGTCACTGAGTCCGTCTCATTCCTGTGTgctgtgatgtttcctgttgttTTGTAGTTAATGTTACACTTTCAGTATAACTTAAGTACAGAGTGTACCAgaatcagtaaaaaaaaaggctcaTTCTAGTTCaggacaaaaaataaaagaactATGATCACCAA
>XM_039781688.1
TTACTCATCGTTTCCTCCTCAGAGCAGTAGCTTATCTTTCCGGGAGTTATTTTGGGGCCTTTAATGTGAAGATGTTTTCCCTGTGTGAGGCCTCCCTGACCCCTGTCGACACACTGGAGCACTCTCTCGCACACATTCTTACTTGTCCTCCTCTGAGCTTCAGATGGCTTACCAGGTCCTTAATCTGTCCTCTGAGTGAcatccccccctctccctgcaCCCTGCACACACTCCTGGCAGGACagcagaggggagagggagggacgGATAGCAATAGGTGGTGGCCTCTGGTGGTTTAGTGAAGGTGAACTAACCCAGCAGTGAAGCGTAGGAGACATAGCAGGAGCACGCTCCGACACTCTCTGTCAGGGCCATGGCAGCAGGCATAgaggagggacacacacacatggaggagCTGGTGGACCAGGGCCTGGGGATGGAGGAGACGGCCCACGGCCTGCTGGGGAGGCCCTCGCTGAAGGAGAACTACAACAGTGACTGCCTGCTGGCACCTGACACTGACTTCATGACAGATGACCGCAGCTCGGCAGCCAGTGGCCTGGACGTGGCCGACCGGCTGACCTACCTGGAGCAGAGGATGCAGATGCAGGAAGATGAAATCCAGCTGTTGAAGATGGCTCTGGCTGATGTCCTCAAGAGGCTCAACATATCTGAGGAGCACCAAGCAGCTGCTGCCTCTGGTGCTGTTAGGAGACCATCAGGCGTTAAAGCCCGGCCAGTGTCTCTACTTCTGCCCTCCAAACCGCCTATGGTGATCTCCAGCACTGCCTCCCTGAAGAAGAGCTCCACGCTGCCCTCCAGCGTCCCAGCCAAGAACTACAGCCCAACACCGCCCGGCAGtGGTGTGAAGAGCCCCCCGGGTAGTGTGAAGGACAGTCCATGCAAGACCGCTAAACGACTCACCTCTGCAGCCTCCACCTGTAAGAAACCTCCGGAAGGCAAGTCCAAGGAGAGTGCAGTAAGTGTCGGGACAAGGCGTGTGACACACTGCAAAGTGACTATGCAGATCTATCTGAGCCCCCTCACAAGAAAGACTGGATCTTCTGAGACCGCCAAATCCCCCGCCGCTGTGCCTGCCAACAGAGGGCCCACGGCCACACCTAACAACCCTCAGGCAAGGGGGGGCAGCAAGCTAGAGGGAAAGAAGACGACCCCGTCCTTCACCTTAAACCTGCAGAAAACCACAACCAGCCAGAGCACAGCGCAGGACACATCCAGCTACAAGAGCCCCCTCAAATCACCCAGCCAGTACTTTCAGATTTGTTACTGAGGGTAGAGATAGATTTTCTACACCTTTGTCCGTGCTATCAATCACTTGAACAGAAACTGTGAATAAAGACTTTCTTCCATTGTTGATAAAAAAGAGAATCTGATTTTAAAATGGGGATGAGTGCACTTCTGACACGATTTACCTCTTTAGTGCATCCTGACTTTGTTGCTTTTGGGTATGTGTACAGCATTTCAAAACATTTCCAAGTTTGAGTAACTGTGAATAGTGCTTTATGGCATGgctatttattaaaatgataGTACCGTTTGAGagcttaaatgtatttttagccTCCTCTAAGACCACAGCAGGCATAGATCCAGTTctcactgctgtgtgtgtaaacattttctttgtcattctATATGTGAATTTTGTAAAGCAAGGATGTGTCTGTAGTTTTCATTCAGCACTGACTGTGTTTGATGTCACTGAGTCCGTCTCATTCCTGTGTgctgtgatgtttcctgttgttTTGTAGTTAATGTTACACTTTCAGTATAACTTAAGTACAGAGTGTACCAgaatcagtaaaaaaaaaggctcaTTCTAGTTCaggacaaaaaataaaagaactATGATCACCAA

Function

GO:

id name namespace
GO:0050877 nervous system process biological_process
GO:0050953 sensory perception of light stimulus biological_process
GO:0007600 sensory perception biological_process
GO:0007601 visual perception biological_process
GO:0003008 system process biological_process

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781685.1 True 2144 mRNA 0.49 7 14430403 14439516
XM_039781686.1 False 2139 mRNA 0.49 7 14430405 14439516
XM_039781687.1 False 1883 mRNA 0.51 7 14427564 14439516
XM_039781688.1 False 1879 mRNA 0.51 7 14427565 14439516

Neighbor

gene id symbol gene type direction distance location
LOC120547018 LOC100697584,LOC101486653,LOC103373760 coding upstream 91922 14329618 ~ 14335642 (+)
lamp5 lamp5 coding upstream 186966 14235279 ~ 14240598 (+)
LOC120546497 NA coding upstream 192573 14232278 ~ 14234991 (+)
LOC120546405 plcb4 coding upstream 198337 14144585 ~ 14229227 (+)
LOC120547093 tpd52l1 coding upstream 437485 13989481 ~ 13990079 (+)
evlb LOC102297057 coding downstream 2677 14442193 ~ 14493620 (+)
yy1b LOC101066055,LOC104919809,LOC102203025,LOC101483827,LOC100706360 coding downstream 55253 14494769 ~ 14500520 (+)
LOC120547075 LOC103359908,LOC104919811,LOC101483143,LOC100706096,LOC102294806 coding downstream 89955 14529471 ~ 14537267 (+)
LOC120546629 NA coding downstream 101099 14540615 ~ 14548931 (+)
LOC120547239 c7h14orf37,LOC107717645,LOC107659812 coding downstream 155645 14595161 ~ 14602820 (+)
G184235 NA non-coding upstream 56796 14370124 ~ 14370768 (+)
LOC120547176 NA non-coding upstream 438908 13952385 ~ 13988656 (+)
G184128 NA non-coding upstream 536648 13889301 ~ 13890916 (+)
G184085 fkbp1b,LOC102794993 non-coding upstream 959477 13458602 ~ 13468087 (+)
G184078 mut non-coding upstream 978465 13443043 ~ 13449099 (+)
G184249 LOC101061969 non-coding downstream 37108 14476624 ~ 14565127 (+)
G184263 NA non-coding downstream 119026 14558542 ~ 14606665 (+)
G184339 NA non-coding downstream 216118 14655634 ~ 14656247 (+)
G184341 NA non-coding downstream 220803 14660319 ~ 14660735 (+)
G184342 NA non-coding downstream 221230 14660746 ~ 14661130 (+)
LOC120546619 LOC103359912,LOC102080314 other upstream 2700 14393440 ~ 14424864 (+)
G184231 NA other upstream 46377 14362341 ~ 14381187 (+)
LOC120546742 plcb1 other upstream 286795 14024484 ~ 14140769 (+)
LOC120546706 wdcp other upstream 953405 13468235 ~ 13474159 (+)
G183994 phip other upstream 1180148 13145475 ~ 13247416 (+)
G184258 NA other downstream 85620 14525136 ~ 14529370 (+)
hsp90aa1.1 LOC103369948 other downstream 689960 15129476 ~ 15134860 (+)
LOC120546207 NA other downstream 850158 15289674 ~ 15293252 (+)
G184458 NA other downstream 862409 15301925 ~ 15318836 (+)
rhov rhov,LOC102778135,LOC100699098,LOC101469787,LOC102306362,LOC107602886 other downstream 1221057 15660573 ~ 15663661 (+)

Expression


Co-expression Network