lpin1b (lpin1,LOC104949544)


Basic Information

Item Value
gene id lpin1b
gene name lpin1,LOC104949544
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 16837534 ~ 16856613 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781872.1
ACGCTGTCCACTTGCACACGGCAGTCAGACTCTTGACATGCTCACGGAGCGAAGACTTAAGTTGTAGACTGGATCGGACTTGTGGAGtttcatacatacatatctGTTTAGAGGTAGCTAAGACCTGAGACCTGCAGCTGGGATCAAACACATTATGGAATCATGACATCAGCGGAGGACGATGAAGAGTTTGATGAGGCCGTTGAGCGCTATGCCAGTGACACCACCTGGAGCTGGACCCTTCAGACCATGAACTACGTGGGCCAGTTGGCGGGCCAGGTGTTTGTCCAGGTCAAAGAGCTGTACCGAGGCCTCAATCCCGCCACCCTTTCTGGCTGCATTGACGTCATCGTAGTGAGACAGCCCGATGGATCCCTGCAGTGCTCACCTTTCCATGTTCGCTTCGGCAAAATGGGAGTCCTCCGCTCCCGAGAGAAAGTGGTGGACATGGAGATCAATGGAGAACCAGTGAATCTCCATATGAAGCTTGGGGACAACGGGGAAGCATTCTTTGTGCAAGAAACAGAAAATGACGAGGAAGTGGTTCCGTCCTACCTGGCCACCTCTCCGATCTTGTCAGATGGAGCCATTCTGATGAGCTCCTCCCTGATGGGGAAATGCTCCGGGCCAACCATACAAACCCTGGGCTCCTCGGGGAGCATGGGAGAGACCGGAAGTGTAGTGacgaagaagaggaggaagaggaggaagaagactcGGGCGGACAGcttgaggagagaggagagtggGGACTACTCCGAGGATGAAGACATGTTCACCATAGACATCAGCTCAGATGAAATGACGACGATGCAGAGCAACAGGACTTCATCTCAGGACGTTTTAAGAGATGAGACAACAGACGGCTCTTTCTACACTCGTTCAGATGGAGAGTGGAGCCCTATTCAGAGCCCTGGAAACTCTCGTCCCACCTCTTCTAAGAGCGACTCTGAACTAATGAGCAAGCCGTCAAACAATCAGAATCCAACCATGCACTGGGCGTGGGGAGAGCTGCCACAGGCTGCCACGCCATCCTTCCTTCCAGTGAAATCCAACCCTCAACCAGTGTGCCCAGTATCCATCCCTTTTTCTGAAAGCACACACTTCCGTGTGATAACTCACGAGGCGTCTTCGGAACAGTGCGGACCCTGCTCAGAAATATCAGCGCTCAGACTGCTGATGCCAGAGGAGACCAGTGAGGAGACAGTTGAGATGGAGTCCGAATCCATGAGGATGGAGACCCAGACAGCCGGAGGTGCGGCAACTTGTATGATGTCTGACACGGAGGAGACAATGTGTCGTCCACCAGGAAAGACAGACTCTCCATCCAAGAGAAAAGACAAGAGAAGCCGCCATCTTGGTGCTGATGGAATTTAcctggatgacatcacagagcTCGAGCCTGAAGTGGCGGCCCTTTATTTCCCTAAGAGTGACGGTGGTGCAGCAGTGAGGAGCATCTCGGACCCGGGCCTCCACAGCAGCAGTCTGTCCCCACAGTCACTCAGCTCTGGAGGGGACAGCGGAGTGGACAGCTACTGCGACCCCTTGGCTGACATGCCGTCTATCGCCATTTCCTTGTGTGGAGGACTCAATGACAACAAGGAGATCACTAAAGAGCAGTTCCATGAGAAGATCATCTCTTACCAGCAGTTTTCGGAAAACCCCTCCATCATCGACGACCCCAACTTAGTTGTGAAAATTGGCTCCAAATACTATAATTGGAGCTCTGCGGCTCCACTTATGCTGGCTATGCAGGCCTTTCAGAAACCGCTGCCAAAGGCTACAGTGGAGAACATCATGAAGGAGAAGATGCCCAAGAAAGGAGGGAGGTGGTGGTTCTCCTGGCGAGGCAGAAACAGCAGCACCAAATCGGATTCCGTCTCTGAGCGTGGGGCCTGTGGCTATGATGAGCAGGCTGGGAAAATGTCAAGCAGACGCAAAGAAGAGTCGTCCTCTAGTGATGAAGACCACAGGGCAGCCAAACAGAGCTCTGCCACCATCCAATCAGAGCCTGGGCTCACACCGGGAGGCGTGACTTATAAGAAAACACTTCGGCTCACATCAGAGCAGCTGctgtCTCTCCAGCTGCAGGATGGTCCTAACGATGTTGTGTTCAGCGTGACCACTCAGTACCAGGGAACCTGTCGCTGTCAGGGCACCATCTACCTCTGGAACTGGGACGACAAGATAATTATCTCTGACATAGATGGAACCATCACCAGGTCGGACACACTGGGTCATATCCTGCCCACACTGGGGAAAGACTGGACCCACCAGGGCATAGCACACCTCTACCACAAAGTCAGCCAAAATGGCTACAAGTTCCTGTACTGCTCAGCTCGAGCTATCGGCATGGCTGACATGACCAGAGGTTACCTACACTGGGTCAACGAAAGAGGCACCATGCTTCCTATAGGCCCCGTCCTTCTCAGCCCGAGCAGCCTCTTTTCAGCTCTGCACagGGAAGTGATCGAGAAGAAACCAGAGAAATTCAAGGTGGAGTGTCTCAACGATATCAAGAACCTCTTCTAccccaacacacagccattcTATGCAGCATTTGGCAACAGACCAACgGATGTATATTCCTATAAAGAAGTAGGAGTGCCTCTAAACAGGATTTTTACAGTAAACCCTAAAGGAGAGCTAGTGCAGGAGCATGCCAAGACCAACATCTCATCTTACGTCCGTTTGGGTGAGGTGGTGGACCATGTGTTTCCTCTGAAGATGCGGGCCTCCTCCTCAGACTTCCCCTGCTCAGACACCTACAGCCACTTCACCTACTGGAGGCAGCAGCTCCCCCGGGTGGAGCATCAGGGCACTACACCTCCACAGTCTCCCCGTCCCAGCAGCTGACTACCCGTGGCCTGCTGAGCGGCTCCTAGCAGGCAGAGCACTGATGGGTGTGATATGAATCTGTAGATGTTTGTAGAacatgtagcactttgagatcacagagagagcgagagagagagagctgctgtGAATACTCTTATAACGCACAAGAGGGATGTAAGCGCACTTTCATGAAAAGACGGCCTCTGTAGCCTTCTGACTAGATGTATGTATTTGAgcaattataataatttattcaGGCAGCTTAGCACATGTATTATTTTTGACATTATTTAGGTAGCTAAAGGTAGCTTTCTAGGCAGACAGTTGCATTCTGCATCTAACAGATGATATGGCTTCTGTTCAGAAGtgcatcacacagacacactgtgcACACATAAGAGAGCAAGTTACTTAAACGTGTGCCAAATACTCAACGTAGAATTTATTTTCGTATTTCGTTTTTTCAGTCCAGACTGTTACAGATCCTGAATCAGCATGGAAATGCAGATATAtacctatatacagtacatacatgcaGACTAATTTGACTTTATAGCAACACGTGTGTGTAATCTAATAttctgtttgaaaaaaaaaacagtattagttacatattacattaaaatgtattacaGAGCACAATGATTGAATGATCATCTATCTATATAGCTTGACATTATCCTGACAGAGGGTGCATTATAAAGACGGTTTGGAATGAATATTTATTGTTGAGACAAAATAATGCTGATagagaacagaaagaaaaacattttcagtgGTCAAAATCAAGAGTATCTGTGAGAGGAACTgctaaatcatttttatttttctattgacATCCACACTGTCTATATGTTGTGATCATTTCTGTTGTGGCCTTCATGAAACGCCTTTTAATTTATCCAGTTCATAAAATAAGTCTATGTGACGTGTTCCACTCTCTAAGATGTATGCTTGTTTCCATAAATGCCATAgagtatattttatttattcatctgaTGACATACTGACTGATATAAAATGTAGCTTACATATACATTAGCCATTGGTTCTTTTACTGTACTTCCATGCCCTAGTAATGTCACTTAAAGCAAAGCCCTCATTGGACTATCCATAGCTTAGAGCAGACAGTAGGCcacagtacacacagacactcgtGAAGTGATCTTTATTTCTTACAATACCACAGATAACCTGaggtcatatacagtatatgtacagGAGCTGCTATCACAGTGACTGTGACCATAACTATATGAACAGTATCATCATATCGAGTAAGCCTGCAGTTTATAAAAGAGGATGTGTGCATATAATGCTTTTTATTCTTTCCATGAAAGAGCTACTAAACATAGCCTGAAAGCGTATTATCTTTGCCTTAACTGTGAACAATATGATCAAGGATTTGTTCATTTATTCCCTCCACCCCTTCTCTTGACCAgttcactgttacatttatGTAATCaaacttattaaaaaaatatgccTTGGTT
>XM_039781873.1
AATTTGACGCAACCAGTCAACTGTCTGCAACAATGTAAGCAGCTGTAATTGTGTTGCCACTGTGGCAGCTGAAACGATGCTTTTGGCAACTCAACAGCTCTACGCTGATTGGTCAGCGGGGGGGGTTCGATGCAGATGATGTCATCCACTGTCAAGGCTCGCTGAGCTAGACAGAGCGAGAGAAACAGACGGGGCAAAGGGAGAAGTTAGCATCGCGTTgacttaaaataatttttttttgtcgctGAAAGGCGGTGACACCAAGTCAAGGCTTTATCAAACACTCAGATATCACCTCTATCGGGAAATTCCGCTTCTATGATGTGTTGTTAAGCTGCCATTCACCGCTGAGGAAACGCCAGTCTCCGTAAAGGCTGTCTGCATACTCAGCTACTGTATAGAAGACCCTTCAGACCATGAACTACGTGGGCCAGTTGGCGGGCCAGGTGTTTGTCCAGGTCAAAGAGCTGTACCGAGGCCTCAATCCCGCCACCCTTTCTGGCTGCATTGACGTCATCGTAGTGAGACAGCCCGATGGATCCCTGCAGTGCTCACCTTTCCATGTTCGCTTCGGCAAAATGGGAGTCCTCCGCTCCCGAGAGAAAGTGGTGGACATGGAGATCAATGGAGAACCAGTGAATCTCCATATGAAGCTTGGGGACAACGGGGAAGCATTCTTTGTGCAAGAAACAGAAAATGACGAGGAAGTGGTTCCGTCCTACCTGGCCACCTCTCCGATCTTGTCAGATGGAGCCATTCTGATGAGCTCCTCCCTGATGGGGAAATGCTCCGGGCCAACCATACAAACCCTGGGCTCCTCGGGGAGCATGGGAGAGACCGGAAGTGTAGTGacgaagaagaggaggaagaggaggaagaagactcGGGCGGACAGcttgaggagagaggagagtggGGACTACTCCGAGGATGAAGACATGTTCACCATAGACATCAGCTCAGATGAAATGACGACGATGCAGAGCAACAGGACTTCATCTCAGGACGTTTTAAGAGATGAGACAACAGACGGCTCTTTCTACACTCGTTCAGATGGAGAGTGGAGCCCTATTCAGAGCCCTGGAAACTCTCGTCCCACCTCTTCTAAGAGCGACTCTGAACTAATGAGCAAGCCGTCAAACAATCAGAATCCAACCATGCACTGGGCGTGGGGAGAGCTGCCACAGGCTGCCACGCCATCCTTCCTTCCAGTGAAATCCAACCCTCAACCAGTGTGCCCAGTATCCATCCCTTTTTCTGAAAGCACACACTTCCGTGTGATAACTCACGAGGCGTCTTCGGAACAGTGCGGACCCTGCTCAGAAATATCAGCGCTCAGACTGCTGATGCCAGAGGAGACCAGTGAGGAGACAGTTGAGATGGAGTCCGAATCCATGAGGATGGAGACCCAGACAGCCGGAGGTGCGGCAACTTGTATGATGTCTGACACGGAGGAGACAATGTGTCGTCCACCAGGAAAGACAGACTCTCCATCCAAGAGAAAAGACAAGAGAAGCCGCCATCTTGGTGCTGATGGAATTTAcctggatgacatcacagagcTCGAGCCTGAAGTGGCGGCCCTTTATTTCCCTAAGAGTGACGGTGGTGCAGCAGTGAGGAGCATCTCGGACCCGGGCCTCCACAGCAGCAGTCTGTCCCCACAGTCACTCAGCTCTGGAGGGGACAGCGGAGTGGACAGCTACTGCGACCCCTTGGCTGACATGCCGTCTATCGCCATTTCCTTGTGTGGAGGACTCAATGACAACAAGGAGATCACTAAAGAGCAGTTCCATGAGAAGATCATCTCTTACCAGCAGTTTTCGGAAAACCCCTCCATCATCGACGACCCCAACTTAGTTGTGAAAATTGGCTCCAAATACTATAATTGGAGCTCTGCGGCTCCACTTATGCTGGCTATGCAGGCCTTTCAGAAACCGCTGCCAAAGGCTACAGTGGAGAACATCATGAAGGAGAAGATGCCCAAGAAAGGAGGGAGGTGGTGGTTCTCCTGGCGAGGCAGAAACAGCAGCACCAAATCGGATTCCGTCTCTGAGCGTGGGGCCTGTGGCTATGATGAGCAGGCTGGGAAAATGTCAAGCAGACGCAAAGAAGAGTCGTCCTCTAGTGATGAAGACCACAGGGCAGCCAAACAGAGCTCTGCCACCATCCAATCAGAGCCTGGGCTCACACCGGGAGGCGTGACTTATAAGAAAACACTTCGGCTCACATCAGAGCAGCTGctgtCTCTCCAGCTGCAGGATGGTCCTAACGATGTTGTGTTCAGCGTGACCACTCAGTACCAGGGAACCTGTCGCTGTCAGGGCACCATCTACCTCTGGAACTGGGACGACAAGATAATTATCTCTGACATAGATGGAACCATCACCAGGTCGGACACACTGGGTCATATCCTGCCCACACTGGGGAAAGACTGGACCCACCAGGGCATAGCACACCTCTACCACAAAGTCAGCCAAAATGGCTACAAGTTCCTGTACTGCTCAGCTCGAGCTATCGGCATGGCTGACATGACCAGAGGTTACCTACACTGGGTCAACGAAAGAGGCACCATGCTTCCTATAGGCCCCGTCCTTCTCAGCCCGAGCAGCCTCTTTTCAGCTCTGCACagGGAAGTGATCGAGAAGAAACCAGAGAAATTCAAGGTGGAGTGTCTCAACGATATCAAGAACCTCTTCTAccccaacacacagccattcTATGCAGCATTTGGCAACAGACCAACgGATGTATATTCCTATAAAGAAGTAGGAGTGCCTCTAAACAGGATTTTTACAGTAAACCCTAAAGGAGAGCTAGTGCAGGAGCATGCCAAGACCAACATCTCATCTTACGTCCGTTTGGGTGAGGTGGTGGACCATGTGTTTCCTCTGAAGATGCGGGCCTCCTCCTCAGACTTCCCCTGCTCAGACACCTACAGCCACTTCACCTACTGGAGGCAGCAGCTCCCCCGGGTGGAGCATCAGGGCACTACACCTCCACAGTCTCCCCGTCCCAGCAGCTGACTACCCGTGGCCTGCTGAGCGGCTCCTAGCAGGCAGAGCACTGATGGGTGTGATATGAATCTGTAGATGTTTGTAGAacatgtagcactttgagatcacagagagagcgagagagagagagctgctgtGAATACTCTTATAACGCACAAGAGGGATGTAAGCGCACTTTCATGAAAAGACGGCCTCTGTAGCCTTCTGACTAGATGTATGTATTTGAgcaattataataatttattcaGGCAGCTTAGCACATGTATTATTTTTGACATTATTTAGGTAGCTAAAGGTAGCTTTCTAGGCAGACAGTTGCATTCTGCATCTAACAGATGATATGGCTTCTGTTCAGAAGtgcatcacacagacacactgtgcACACATAAGAGAGCAAGTTACTTAAACGTGTGCCAAATACTCAACGTAGAATTTATTTTCGTATTTCGTTTTTTCAGTCCAGACTGTTACAGATCCTGAATCAGCATGGAAATGCAGATATAtacctatatacagtacatacatgcaGACTAATTTGACTTTATAGCAACACGTGTGTGTAATCTAATAttctgtttgaaaaaaaaaacagtattagttacatattacattaaaatgtattacaGAGCACAATGATTGAATGATCATCTATCTATATAGCTTGACATTATCCTGACAGAGGGTGCATTATAAAGACGGTTTGGAATGAATATTTATTGTTGAGACAAAATAATGCTGATagagaacagaaagaaaaacattttcagtgGTCAAAATCAAGAGTATCTGTGAGAGGAACTgctaaatcatttttatttttctattgacATCCACACTGTCTATATGTTGTGATCATTTCTGTTGTGGCCTTCATGAAACGCCTTTTAATTTATCCAGTTCATAAAATAAGTCTATGTGACGTGTTCCACTCTCTAAGATGTATGCTTGTTTCCATAAATGCCATAgagtatattttatttattcatctgaTGACATACTGACTGATATAAAATGTAGCTTACATATACATTAGCCATTGGTTCTTTTACTGTACTTCCATGCCCTAGTAATGTCACTTAAAGCAAAGCCCTCATTGGACTATCCATAGCTTAGAGCAGACAGTAGGCcacagtacacacagacactcgtGAAGTGATCTTTATTTCTTACAATACCACAGATAACCTGaggtcatatacagtatatgtacagGAGCTGCTATCACAGTGACTGTGACCATAACTATATGAACAGTATCATCATATCGAGTAAGCCTGCAGTTTATAAAAGAGGATGTGTGCATATAATGCTTTTTATTCTTTCCATGAAAGAGCTACTAAACATAGCCTGAAAGCGTATTATCTTTGCCTTAACTGTGAACAATATGATCAAGGATTTGTTCATTTATTCCCTCCACCCCTTCTCTTGACCAgttcactgttacatttatGTAATCaaacttattaaaaaaatatgccTTGGTT

Function

symbol description
lpin1 Enables phosphatidate phosphatase activity. Involved in phosphatidic acid metabolic process. Predicted to be located in cytoplasm and nuclear membrane. Predicted to be part of endoplasmic reticulum and transcription regulator complex. Predicted to be active in mitochondrial outer membrane and nucleus. Biomarker of morbid obesity.

NR:

description
PREDICTED: phosphatidate phosphatase LPIN1-like isoform X1

GO: NA

KEGG:

id description
K15728 LPIN; phosphatidate phosphatase LPIN

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781872.1 False 4334 mRNA 0.47 20 16837534 16856613
XM_039781873.1 True 4501 mRNA 0.47 20 16841032 16856613

Neighbor

gene id symbol gene type direction distance location
wdr26b wdr26,LOC104925620,LOC103363787 coding upstream 74090 16746173 ~ 16763444 (+)
LOC120546775 adcy3,LOC102197140,LOC101471325 coding upstream 92704 16730063 ~ 16744830 (+)
rsph9 rsph9 coding upstream 227808 16605386 ~ 16609726 (+)
tmem63a LOC104944870 coding upstream 238072 16588850 ~ 16599462 (+)
faxca LOC104925628,LOC104963907,LOC103380784,LOC102789719,LOC101473580,LOC102289837 coding upstream 293039 16536311 ~ 16544495 (+)
gnpat2 gnpat coding downstream 1595 16858208 ~ 16873108 (+)
fam228a NA coding downstream 19706 16876319 ~ 16880335 (+)
nbas nbas coding downstream 108853 16965466 ~ 17134416 (+)
ppp1r14c ppp1r14c coding downstream 455861 17312474 ~ 17331367 (+)
mtfr2 NA coding downstream 521569 17378182 ~ 17391719 (+)
G184851 naga,LOC104944830 non-coding upstream 111142 16724877 ~ 16726392 (+)
G184796 NA non-coding upstream 227154 16595940 ~ 16610380 (+)
LOC120546561 NA non-coding upstream 321201 16493194 ~ 16516333 (+)
G184633 LOC101069623,LOC100711363,LOC102312356,LOC101478077,LOC102202636 non-coding upstream 424033 16411676 ~ 16413501 (+)
G184618 NA non-coding upstream 480986 16291211 ~ 16356548 (+)
G184948 NA non-coding downstream 77083 16933696 ~ 16956864 (+)
G184995 NA non-coding downstream 424502 17281115 ~ 17299420 (+)
G185022 NA non-coding downstream 536921 17393534 ~ 17397048 (+)
LOC120546618 NA non-coding downstream 573407 17430020 ~ 17447803 (+)
G185015 NA non-coding downstream 582076 17438689 ~ 17440600 (+)
G184859 NA other upstream 4220 16825694 ~ 16833314 (+)
si:ch211-57i17.1 LOC103363786 other upstream 57599 16765545 ~ 16779935 (+)
vegfab vegfa other upstream 151455 16671586 ~ 16686079 (+)
G184628 LOC104949332,LOC106633454,LOC101477798,LOC102792991 other upstream 433457 16399438 ~ 16404077 (+)
nkain2 nkain2 other upstream 445683 16248094 ~ 16391851 (+)
G184996 sec63 other downstream 437041 17293654 ~ 17295701 (+)
map7b map7,LOC107374525 other downstream 485224 17341837 ~ 17375059 (+)
G185145 LOC108242497,LOC106926748,LOC106945794 other downstream 812559 17669172 ~ 17686398 (+)
LOC120546940 NA other downstream 817780 17674393 ~ 17693634 (+)
G185237 NA other downstream 1060240 17916853 ~ 17917248 (+)

Expression


Co-expression Network