cnksr3 (LOC103372737,LOC102212624,LOC102300107)


Basic Information

Item Value
gene id cnksr3
gene name LOC103372737,LOC102212624,LOC102300107
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 31507627 ~ 31575751 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782029.1
TGTAAACTTTGTCCACGAGCTCAGTCAGTTGGCGGCGGAGCGTTGAACGGTTGCTACTGCGTCTGTCTCTGTGCCGTAACGGGAGCCCCTCCGTTAATCATGTCCGACTAACGGTTTCATTCGGTAATTTCGGTGAAGCGAGAGATAAATTGAATCCCGGAGAAAAGCCGGTTGGAGAAATGGAGGCTGTGAGCAAGTGGACCCCGCAACAAGTGGTGGACTGGATCCGAGGGCTGGACGACAGCCTGCAGCCGTACATCCCGTCCTTCCAGCGGCAGCAGGTGGACGGGGAGAAGCTGCTCAGGATGTCCCACCAGGAGCTGCTGTCTCTGGGCATGGCGCGGGTCGGACACCAGGAGCTGTTGCTGGAGGCCGTGGATCTGCTCTGCGCTCTGAACTACGGCGTGGAGAAGGACAACCTGAAGACTCTGGTGGGGAAGATGAGAGCGGCGCACCACAACCTGAACAGCTCGGTGTCGCAGCGCAGGAAGAACCCGGCCTACCACTGCAAAATCTCCCATCAGCCCTCCAACGAGTTCCTGACCGCCGTGGTCGAGCTGATCGGCGCCGCCAAGAGTCTGCTGGCCTGGCTGGACAGGACTCCGCTGACGAGCGCCAACGACTTCACCTCCACCAAAAGCCGAATCATCCAGCTGTGTCTGGAGCTCACCTCCACCGTGCAGAAGGACTGCACTGTTTATGAGATCGAGGAGAAGATTCTGGAAGTGtCCCGAGCTCTGAACGCCGTCTGCGAGAAGACGGCCCAGGCGGCCTCGGACCCCTCCGCGAGCGGGTTGTCCTGTCTGGAGGAGGTGCACATCACCAACATCAAGCCTGGCGAGGGACTGGGTATTTACATAAAATCCACCTACGACGGGCTTCACGTCATCACAGGAACAACGGAGAATTCTCCTGCAGATAAAACTCAGAGGATTCATGCTGGAGATGAAGTGGTTCAGGTCAACAAACAGACCGTGGTGGGCTGGCAGTTGAAGCACCTGGTGGAGAAGCTGAGGGCGGAGTCTGGCGGCGTCGTCCTGGTGGTGAAGAAGAGGCCGTCGGGAACGAGTGGCTTCGCTCCCGCGCCGCTGAAAAACCTGCGCTGGAGGCCTCCGCTCATACAGACCTCTCAGCGAGCTCCGGGTCTCCACAGATCCCAACAGCCAGAAACATCCGACCCTCCTGGGAAGAGAGGGACGACGGCCACATTGGATCTGTACGTCCCTCCTCCCCCTGCGGCCCCGTACGCACCGCTAGACGGGGACGTGATCGTGTCTCCGGGTGTGAAAATGAGGCCCAAGTCTCCGAACTCGTGTCTGGACGCAGACGTGCGGCGGCGCTCCGCCGTCGGCGACGACAAACGGACGTCCGTCAGGTCCCCCCCGCCTGAACACAACCAACCAATCGCTGTGTGCCTTCGACAGCGCTCGTCTACACGCTGTAAACCTCGACCCGTCTCCATGCCGGTGGAGTCGTTTTCAGGGGACCCGTCCTCCAGGCCCGGGGCTCGGGGAAGGAAAGGGCAGGACGTCCTGCACAGATATCTGAGCAACGAGGGTATCAGCACCATCACAGAGGAGGAGCCGTGTTTCCCTCTGCCGTACCGAGGACACCCGTCCATCCGCGGCGTGGACCACATCCGAGGCAGCCAGTGCTTCATCAACGCCAACCTGCACAACAGCGCCACCATCCCTTACCAGGAAGCCGCGTCCAAGAAGTCTGCTGCCTCCACCTCCCCCTCTGCTGCTGTTTCTCCCCCCGCGGCTGTAACCAAACAGTCCACTTCGCTGCTCGGAGGCTGGCTGGCTCGTCTCAGGCTGCTCAGCCACTGACGGAGTCTCAGCGGCCATTTTTATTAGATAAAATGCATGATCCTCAGGATGTCTACAGGAAAAACAgaggtttttaaatgtctgttaGTTCAAGACCTTCAGCAAATAATTAGTCCAATACGAACAGCTCATGGAAAACCAACTTCTGGTACCAACCAAAGATCTAAAAAGTCAACGCCAGAGCAAAGAAATGCCACAGAGCAACAGTTGATTGTTTTTCTACATCGACCAGGACCAtttttattcagtttattgTCACCATGAACTTCATACTAGAGACTCCATGTTGACACTTAATTTTCCACTTAAAATAATTCAAAATAGGAAATTAGAAAAATTCAATTCAAGCTCTAAAGACAGCTCAACAGTAATTATGTATTTCACTGTGGCTTTAAATTAGTATTACATTATCTACACCAGTTCTGAATTTGAACCAGTTTCTTTTGTGTATATAAAAAACTGTGAATTGGTTAACAAACACACGTTGCGACGTCGCTTTTTGAATGCTGAAAACAAACTTTCTGTAACGCTGTTTGGACCTGCTGAGCTTCCATACAGGATGTCAAACTCATGGAAAAACAAGTGGAAACATTCAACTTGTGCATGGAAACAGAAaatagtacatacagtacaggccagtacaggccaaaagtttggacacaccttctcattcaatgcgtttcctttttattttcatgactatttacattgtaga

Function

NR:

description
PREDICTED: connector enhancer of kinase suppressor of ras 3

GO:

id name namespace
GO:0009966 regulation of signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782029.1 True 2547 mRNA 0.54 13 31507627 31575751

Neighbor

gene id symbol gene type direction distance location
rps7 rps7,LOC107668222,LOC107601753,LOC107726469 coding upstream 2769 31496301 ~ 31504858 (+)
LOC120547352 NA coding upstream 3399 31504009 ~ 31504228 (+)
LOC120547351 NA coding upstream 6573 31500835 ~ 31501054 (+)
LOC120547350 NA coding upstream 8299 31499109 ~ 31499328 (+)
LOC120547349 NA coding upstream 9453 31497955 ~ 31498174 (+)
LOC120546439 NA coding downstream 6667 31582418 ~ 31586949 (+)
LOC120547115 prkd3,LOC103372736 coding downstream 44657 31620408 ~ 31704363 (+)
cebpz LOC104961443,LOC104960473 coding downstream 159819 31735570 ~ 31756918 (+)
nkx2.2b NA coding downstream 291143 31866894 ~ 31869296 (+)
nkx2.4b nkx2-4,LOC103364681,LOC102215835,LOC102780891 coding downstream 305714 31881465 ~ 31884802 (+)
G188737 NA non-coding upstream 34629 31472777 ~ 31472998 (+)
G188736 NA non-coding upstream 48926 31458421 ~ 31458701 (+)
G188719 NA non-coding upstream 152122 31351448 ~ 31355505 (+)
G188450 NA non-coding upstream 256509 31190402 ~ 31251118 (+)
G188427 NA non-coding upstream 345571 31110654 ~ 31162056 (+)
G188748 NA non-coding downstream 15304 31591055 ~ 31591459 (+)
G188749 NA non-coding downstream 21464 31597215 ~ 31597715 (+)
G188757 NA non-coding downstream 98954 31674705 ~ 31752206 (+)
G188761 NA non-coding downstream 127280 31703031 ~ 31703647 (+)
G188763 NA non-coding downstream 133128 31708879 ~ 31710971 (+)
hivep2a LOC103373864 other upstream 198231 31169067 ~ 31309396 (+)
G188352 NA other upstream 625181 30611681 ~ 30882446 (+)
LOC120546905 NA other upstream 695175 30794219 ~ 30812452 (+)
angel2 NA other upstream 1171425 30324972 ~ 30336202 (+)
btbd9 btbd9 other upstream 1410388 30084548 ~ 30097239 (+)
LOC120546816 NA other downstream 30303 31606054 ~ 31614522 (+)
LOC120546196 LOC105017826 other downstream 201212 31776963 ~ 31782066 (+)
myo6a myo6,LOC103369425 other downstream 1000705 32576456 ~ 32767003 (+)
mei4 NA other downstream 1390087 32965838 ~ 33041169 (+)
pex7 pex7,LOC102797744 other downstream 1752341 33328092 ~ 33386989 (+)

Expression


Co-expression Network