LOC120546901


Basic Information

Item Value
gene id LOC120546901
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 30814853 ~ 30821281 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782154.1
TGCAGTATCAAATTCAGGACACTTTTTGGAAATCATGGGTATATTAGATCTGTTTCTCCAGTCCTTCAGCTCTATCTCCTTGTTGGGGGGTCTGGTGGTCCTGCTACTCTTCTACCTTGTCTCGTCCTCCAGCTTCAGCTCCAAGGAGGACAGGAAGGAACCTCCAGGACCAAGACCGCTGCCCCTCCTTGGGAATCTGCTGCAGATTGACCTCAAGAGACCCTACCACACATTACTGAAGCTTTCCAAGAAATATGGATCAGTGTTCACCGTCTATTTGGGACCAAAGAAAGTGGTGGTCCTGGCTGGGTACAAGACGGTGAAGGAGGCACTTGTCAATCATGCTGAAGAGTTTGGAGAAAGAGATCCAATGAAAATTATGCATGAATATGATCAAGGACATGGCATTGTATGGTCCAATGGTGATTCGTGGAAAGAGATGAGGCGCTTTGCTCTGACTAACCTGAGAGACTTTGGGATGGGCAAGAAGGCGAGTGAGGACAAAATCATTGATGAATGTGACCACCTTATTGGAGTGCTCAAGAAATTCAAAGGAGAAGCTTTTGATACAACCCTACCAATACACTATGCAGTCTCTAATATTATCTGCTCCATTGTTTATGGCAGCAGATTTGAATATGATGATCCAGAGTTTACATCACTGGTAGAGTCCATTAGCGCACGTGTTAATCTTTCGGTCTCCTCTTCAATACagGTGTACAACATGTTCCCATGGTTCTGCAAATGGACTGCTAACCGGAGGTCCTTCCTCAGATTGGGTGCTGACAGTATAAGACAGAACTCACAGCTGTTCAGTCGTTTGAAAGAGACCCTCAATCCACAGATGTGCAGAGGCTTTGTGGACGCCTTTCTGGTCCAAAAGCAAAAGTTGGAGAAATCTGGGATTACCAACAGTCATTTCCACGATGAAAACCTTATGATAACAGTTCAGAATCTGTTTTCTGCTGGCACTGACACAACTGGAACTACACTGAGATGGGGACTTCTGTTCATGGCCAAGTATCCAAAAATACAGGACCAGGTCCAGGAAGAGGTGAGCAGGGAGATAGGAAGTCGTCAAGTGCAGGTCGAGCACAGGAAGAACCTGCACTTCACCAACGCTGTCATCCATGAGACACAGAGACTGGCCAGCATCAACCCGTTACTTCCTCACAAAACTACCCAAGATGTCACCTTTCAGGGTTATGTCATTAAGAAGGGGACCGCAGTATCTCCTCTTCTGACATCTGTCCTGTATGATGAGAGTGAGTGGGAGAGGCCACACAGCTTTTATCCTGCTCACTTCCTGGACAAAGACGGGAAGTTTGTCAAGCGAGAAGCCTTCATGCCTTTTTCTGCAGGTCATAGAGCTTGTCCTGGAGAGAGTCTGGCCAGGATGGAGCTCTTCATCTTCTTCACCACACTCCTGCAGCACTTTCGTTTCACTCCTCCTGCTGGAGTTTCAGAGGATGAACTGGATCTGACTCCATATATGGGCTTCACCCTCAACCCCTTACCTCACAAATTGTGTGCTGCCCCTGTACATGAGGAAGAGTAGGGCTTGAGAATTTAAACAGTAGTTTAAAAGTAATGAAAATGTTCAACACCAGTGATATAATTAAGAAAATGTTGTTGAATGTTTGCTTTAGAAGTGCTCATGTCCCAGCATTGGACTTTCTTCATTAGCTACTTACTATGTATGCCAGCAGAACACAAGCATCTTACAACTACTACAAAAAAGGCTGTGTTGTAACTTGACTTAACATTTTGATGTACACAATaaacaatgaatgaatgaatgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782154.1 True 1803 mRNA 0.45 9 30814853 30821281

Neighbor

gene id symbol gene type direction distance location
LOC120546909 NA coding upstream 140880 30669756 ~ 30673973 (+)
trnat-ugu_4 NA coding upstream 441115 30373666 ~ 30373738 (+)
galnt14 galnt14,LOC103365833,LOC102790467 coding upstream 491509 30125463 ~ 30323344 (+)
zfand3 zfand3,LOC104930467,LOC103365830,LOC101473384,LOC100698322,LOC106531772 coding upstream 699048 30099959 ~ 30115805 (+)
LOC120546869 NA coding upstream 731790 30028950 ~ 30083063 (+)
LOC120546904 NA coding downstream 5478 30826759 ~ 30830636 (+)
LOC120546903 NA coding downstream 16450 30837731 ~ 30850277 (+)
LOC120546902 NA coding downstream 23774 30845055 ~ 30850277 (+)
LOC120546900 NA coding downstream 42109 30863390 ~ 30872873 (+)
nsl1 NA coding downstream 184201 31005482 ~ 31013827 (+)
G188353 NA non-coding upstream 1068 30783618 ~ 30813785 (+)
LOC120546922 NA non-coding upstream 176782 30635414 ~ 30638071 (+)
G188374 NA non-coding upstream 269590 30476757 ~ 30545263 (+)
LOC120546896 NA non-coding upstream 313609 30499354 ~ 30501244 (+)
G188367 NA non-coding upstream 379056 30411623 ~ 30435797 (+)
G188421 NA non-coding downstream 199300 31020581 ~ 31020954 (+)
LOC120546487 NA non-coding downstream 262190 31083471 ~ 31086840 (+)
G188430 NA non-coding downstream 266529 31087810 ~ 31093393 (+)
G188438 NA non-coding downstream 278561 31099842 ~ 31100187 (+)
G188427 NA non-coding downstream 289373 31110654 ~ 31162056 (+)
LOC120546905 NA other upstream 2401 30794219 ~ 30812452 (+)
angel2 NA other upstream 478651 30324972 ~ 30336202 (+)
btbd9 btbd9 other upstream 717614 30084548 ~ 30097239 (+)
G188296 LOC107662224,LOC107746645,LOC107750038,LOC107712283,LOC107663761 other upstream 1169030 29645254 ~ 29645823 (+)
G188268 fabp7,LOC105924611,LOC105419070,LOC101079341,LOC102793361,LOC107727581 other upstream 1350979 29461849 ~ 29463874 (+)
hivep2a LOC103373864 other downstream 347786 31169067 ~ 31309396 (+)
LOC120546816 NA other downstream 784773 31606054 ~ 31614522 (+)
LOC120546196 LOC105017826 other downstream 955682 31776963 ~ 31782066 (+)
myo6a myo6,LOC103369425 other downstream 1755175 32576456 ~ 32767003 (+)
mei4 NA other downstream 2144557 32965838 ~ 33041169 (+)

Expression


Co-expression Network