epm2a (epm2a)


Basic Information

Item Value
gene id epm2a
gene name epm2a
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 20628841 ~ 20638714 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782183.1
TGAATTAGGCTACACCATGTAGAGTTTGCCCTGGTGTGGCTGCATGGTGCGCTTTAATCCGGACAGAGTGGGACTTCATATTTGTCTACCACCTCTTTGCTGTAAACTACACTGTCCAAAACACGAGCCAATTATTTTTAGACACCATTCAGTTAATGGGCCACGAGGACCTCATACTATATTAAACAAAACCCGCCATACTAAACGACTGAGGACACATTTAGTTAAGGCTGCGACAATGTTATTCAAATTCGGTATCATTCTCACTCCAGAGTCTTCGGATGTAGAGGTCTTTGTTTTGGGTTCGCGTACGGAAATGGGCAACTGGGATCCGAGCGCAGCGGTTGAGATGAGAGCCTGCCAGAAGCTCCTGTCAACACATGAACCGTGTCTGTGGATCGGCGACGTGCAGCTGGCAGAGCCGTTCAAAGACACACTGTGGTTCAAGTTCGTCAAAAGAGTCCGAGGCACTTATATCTGGGAAGAAAGGGTGTCTTCTTTGTCACCAGGCAGCGGTCCAAGCCATGACAGATGTTGTTCATATGATGAGAGGAACATCGTGGATGGAGTGTACTGCCATCCGATTGGTCACTGGATAGAGGAAACAGGACACACAGATGAGATGAAACACACCACCAACTTTTACTTTAGTGTGGCTGGTCGGAAGGCCATTCATTTCTCCAGGGTGCTGCCACGTATTTGGCTGGGCAGCTGCCCTCGACAGGTGGAACATGTGACTATAAAGATGAAACATGAATTGGGGATTACTGCAGTGATGAACTTCCAGACAGAGTGGGATGTGGTGAACAACTCCAATGGCTGCAGGCGCAACCCTAGGGAAGCCATGACCCCGGAGACCATGATGCATTTGTACAAAGACTGTGGccttgtgtatgtgtggataCCCACACCTGACATGAGCACTGATGGTCGGATCCGGATGCTTCCCCAAGCTGTATTCTTGCTCCATGGTCTCTTGGAGAATGGTCACACTGTCTATGTTCACTGTAACGCTGGAGTAGGCAGGTCGACGGCAGCTGTGTGTGGCCTGCTTATGTACGTCCTTGGCTGGAGCCTGAGGAAGGTGCAGTACTTTGTTGCAGCCAGAAGGCCGGCAGTGTACATAGATGAGGAGGCTTTAGTCCAGGCTCAGGCAGACTTCATTCAGAAGTTTGGACAACTCCGATCATCCATCTCTTACCCAGAGACATGAGACATTGAGTGTCCTAATAATGAAGTCTTACAGTTATGGAAAGCGTTACTGGACTGGACTCCTTTAAACTACAATGATTCGTGAcaatgtgtgaaaaaaaatatactgtatagtcaGTGTGAGAGGTGCCAGAAGGTGAAATAAGCTGTGGCAAGAAAATTAACTTCTTTCTACTTAAATCTAATGTAAGTAAATGACCCACTTCAGCTGAATGGCTTTCGAAATCTGGTTGAGCCCCAAGTATCTGGAGAGAGTTCCGCTGTCTGACAGCATAGATGTTCCAAGCAATTAATCCTAATGTGATGTGTTagcttttttttacttcaagaTTTACCCTCTGCAATTTAGCACATACAGTTGCAAATTGTGCACTTGAAGTCAGCTTTAGGACACTATATTAGTCGTTTTCAGTAAATGTCTGCAGGGGCGCTTGGAAAGACCTATTCGTTTAGCCTTTTTTTCTAATGATCAATACATagttgacattttgagaaagcAACTTTAAGCTGATGTGTTAAACAGCAATGAATGAGAATGAATAACAGCaaagaaatatatacagtatatcacaatACTACCTATACCGCTGTTTGCTCTCATCCCAAAAGTTGTGCTCCTCAGTAAAGGCTTATTCCACAGTTGCTATTGCATAATTATGTATCAAGTTTGaggatattttttatttcagaaggaaaaaaaaaatcctttcttCTTTTGGAAAGAGCTCTTAATGCTGCATGAAAATAGCACTCCTTGCCAAAGCAACAACTCAATTCTTAAAACCAAAATAACAACAATGCCTCTCCCCCTCTGTCAGAGAGGTATTCAGCTCCCAGACATTGAAGAATACAGCTCCACCCCATCTCTCTCAGCTTGATAGCAtttcatctttatttatttatacgaCAGATGCTATTCCGACCCATCTcccaaataacaaaaacaacatccCTGCCAGACCATTTTAATGCATACATAAGAAGATTATTGGAATAGTGTTTGTTGTCAATTGTGAACGTCTGCCTCGATTTCTGTTAAGGATATATTGCTTTTTTAAGATACAGTGTTTGCTATATCCTGTCCCTGATTTAAGAAAGTTAGTGGATTAGAGAGGAGGAAATACTTTACTTCTTAAGCACAAGTCATATTTTAATTACCTTTCAGTGAGTCCCTTCAGAACACAGCACCTTATGAGGGTGTCAGTGGAGATGGGTGGGTAGATCGAACAATGCACGTTAGCGGAAGCAAATCATTgtggatttttaaaatgtttaaaaatattaacataaaatatgaatatgaaatgaGTAACATGCTTTGTTCTTACTGGTTTGAGGAATAGTACGTCTGTgtgtacagtactgtatgtgcatgagTGCAGGGGTTTGTCACTTAATGGATGCCCatgtaatgttttatttatttcactggGTTATTGCCAGTGATTGATGTTATAAAGTATTTGTAGTCAACATGATTTCCAGGATCTGACAATCACCTACACCAGTTTCCCTGGATCCTTGCATTCCTTGtcaattttcatttattgtataTACAATATTAGAAACCTACAAAATAGTTTGACCTGCTGAATTGAGATTAAAGATATAATAACTTCA
>XM_039782184.1
GAATTAGGCTACACCATGTAGAGTTTGCCCTGGTGTGGCTGCATGGTGCGCTTTAATCCGGACAGAGTGGGACTTCATATTTGTCTACCACCTCTTTGCTGTAAACTACACTGTCCAAAACACGAGCCAATTATTTTTAGACACCATTCAGTTAATGGGCCACGAGGACCTCATACTATATTAAACAAAACCCGCCATACTAAACGACTGAGGACACATTTAGTTAAGGCTGCGACAATGTTATTCAAATTCGGTATCATTCTCACTCCAGAGTCTTCGGATGTAGAGGTCTTTGTTTTGGGTTCGCGTACGGAAATGGGCAACTGGGATCCGAGCGCAGCGGTTGAGATGAGAGCCTGCCAGAAGCTCCTGTCAACACATGAACCGTGTCTGTGGATCGGCGACGTGCAGCTGGCAGAGCCGTTCAAAGACACACTGTGGTTCAAGTTCGTCAAAAGAGTCCGAGGCACTTATATCTGGGAAGGCAGCGGTCCAAGCCATGACAGATGTTGTTCATATGATGAGAGGAACATCGTGGATGGAGTGTACTGCCATCCGATTGGTCACTGGATAGAGGAAACAGGACACACAGATGAGATGAAACACACCACCAACTTTTACTTTAGTGTGGCTGGTCGGAAGGCCATTCATTTCTCCAGGGTGCTGCCACGTATTTGGCTGGGCAGCTGCCCTCGACAGGTGGAACATGTGACTATAAAGATGAAACATGAATTGGGGATTACTGCAGTGATGAACTTCCAGACAGAGTGGGATGTGGTGAACAACTCCAATGGCTGCAGGCGCAACCCTAGGGAAGCCATGACCCCGGAGACCATGATGCATTTGTACAAAGACTGTGGccttgtgtatgtgtggataCCCACACCTGACATGAGCACTGATGGTCGGATCCGGATGCTTCCCCAAGCTGTATTCTTGCTCCATGGTCTCTTGGAGAATGGTCACACTGTCTATGTTCACTGTAACGCTGGAGTAGGCAGGTCGACGGCAGCTGTGTGTGGCCTGCTTATGTACGTCCTTGGCTGGAGCCTGAGGAAGGTGCAGTACTTTGTTGCAGCCAGAAGGCCGGCAGTGTACATAGATGAGGAGGCTTTAGTCCAGGCTCAGGCAGACTTCATTCAGAAGTTTGGACAACTCCGATCATCCATCTCTTACCCAGAGACATGAGACATTGAGTGTCCTAATAATGAAGTCTTACAGTTATGGAAAGCGTTACTGGACTGGACTCCTTTAAACTACAATGATTCGTGAcaatgtgtgaaaaaaaatatactgtatagtcaGTGTGAGAGGTGCCAGAAGGTGAAATAAGCTGTGGCAAGAAAATTAACTTCTTTCTACTTAAATCTAATGTAAGTAAATGACCCACTTCAGCTGAATGGCTTTCGAAATCTGGTTGAGCCCCAAGTATCTGGAGAGAGTTCCGCTGTCTGACAGCATAGATGTTCCAAGCAATTAATCCTAATGTGATGTGTTagcttttttttacttcaagaTTTACCCTCTGCAATTTAGCACATACAGTTGCAAATTGTGCACTTGAAGTCAGCTTTAGGACACTATATTAGTCGTTTTCAGTAAATGTCTGCAGGGGCGCTTGGAAAGACCTATTCGTTTAGCCTTTTTTTCTAATGATCAATACATagttgacattttgagaaagcAACTTTAAGCTGATGTGTTAAACAGCAATGAATGAGAATGAATAACAGCaaagaaatatatacagtatatcacaatACTACCTATACCGCTGTTTGCTCTCATCCCAAAAGTTGTGCTCCTCAGTAAAGGCTTATTCCACAGTTGCTATTGCATAATTATGTATCAAGTTTGaggatattttttatttcagaaggaaaaaaaaaatcctttcttCTTTTGGAAAGAGCTCTTAATGCTGCATGAAAATAGCACTCCTTGCCAAAGCAACAACTCAATTCTTAAAACCAAAATAACAACAATGCCTCTCCCCCTCTGTCAGAGAGGTATTCAGCTCCCAGACATTGAAGAATACAGCTCCACCCCATCTCTCTCAGCTTGATAGCAtttcatctttatttatttatacgaCAGATGCTATTCCGACCCATCTcccaaataacaaaaacaacatccCTGCCAGACCATTTTAATGCATACATAAGAAGATTATTGGAATAGTGTTTGTTGTCAATTGTGAACGTCTGCCTCGATTTCTGTTAAGGATATATTGCTTTTTTAAGATACAGTGTTTGCTATATCCTGTCCCTGATTTAAGAAAGTTAGTGGATTAGAGAGGAGGAAATACTTTACTTCTTAAGCACAAGTCATATTTTAATTACCTTTCAGTGAGTCCCTTCAGAACACAGCACCTTATGAGGGTGTCAGTGGAGATGGGTGGGTAGATCGAACAATGCACGTTAGCGGAAGCAAATCATTgtggatttttaaaatgtttaaaaatattaacataaaatatgaatatgaaatgaGTAACATGCTTTGTTCTTACTGGTTTGAGGAATAGTACGTCTGTgtgtacagtactgtatgtgcatgagTGCAGGGGTTTGTCACTTAATGGATGCCCatgtaatgttttatttatttcactggGTTATTGCCAGTGATTGATGTTATAAAGTATTTGTAGTCAACATGATTTCCAGGATCTGACAATCACCTACACCAGTTTCCCTGGATCCTTGCATTCCTTGtcaattttcatttattgtataTACAATATTAGAAACCTACAAAATAGTTTGACCTGCTGAATTGAGATTAAAGATATAATAACTTCA
>XM_039782185.1
TGTCTGTGGATCGGCGACGTGCAGCTGGCAGAGCCGTTCAAAGACACACTGTGGTTCAAGTTCGTCAAAAGAGTCCGAGGCACTTATATCTGGGAAGGGTGTCTTCTTTGTCACCAGGCAGCGGTCCAAGCCATGACAGATGTTGTTCATATGATGAGAGGAACATCGTGGATGGAGTGTACTGCCATCCGATTGGTCACTGGATAGAGGAAACAGGACACACAGATGAGATGAAACACACCACCAACTTTTACTTTAGTGTGGCTGGTCGGAAGGCCATTCATTTCTCCAGGGTGCTGCCACGTATTTGGCTGGGCAGCTGCCCTCGACAGGTGGAACATGTGACTATAAAGATGAAACATGAATTGGGGATTACTGCAGTGATGAACTTCCAGACAGAGTGGGATGTGGTGAACAACTCCAATGGCTGCAGGCGCAACCCTAGGGAAGCCATGACCCCGGAGACCATGATGCATTTGTACAAAGACTGTGGccttgtgtatgtgtggataCCCACACCTGACATGAGCACTGATGGTCGGATCCGGATGCTTCCCCAAGCTGTATTCTTGCTCCATGGTCTCTTGGAGAATGGTCACACTGTCTATGTTCACTGTAACGCTGGAGTAGGCAGGTCGACGGCAGCTGTGTGTGGCCTGCTTATGTACGTCCTTGGCTGGAGCCTGAGGAAGGTGCAGTACTTTGTTGCAGCCAGAAGGCCGGCAGTGTACATAGATGAGGAGGCTTTAGTCCAGGCTCAGGCAGACTTCATTCAGAAGTTTGGACAACTCCGATCATCCATCTCTTACCCAGAGACATGAGACATTGAGTGTCCTAATAATGAAGTCTTACAGTTATGGAAAGCGTTACTGGACTGGACTCCTTTAAACTACAATGATTCGTGAcaatgtgtgaaaaaaaatatactgtatagtcaGTGTGAGAGGTGCCAGAAGGTGAAATAAGCTGTGGCAAGAAAATTAACTTCTTTCTACTTAAATCTAATGTAAGTAAATGACCCACTTCAGCTGAATGGCTTTCGAAATCTGGTTGAGCCCCAAGTATCTGGAGAGAGTTCCGCTGTCTGACAGCATAGATGTTCCAAGCAATTAATCCTAATGTGATGTGTTagcttttttttacttcaagaTTTACCCTCTGCAATTTAGCACATACAGTTGCAAATTGTGCACTTGAAGTCAGCTTTAGGACACTATATTAGTCGTTTTCAGTAAATGTCTGCAGGGGCGCTTGGAAAGACCTATTCGTTTAGCCTTTTTTTCTAATGATCAATACATagttgacattttgagaaagcAACTTTAAGCTGATGTGTTAAACAGCAATGAATGAGAATGAATAACAGCaaagaaatatatacagtatatcacaatACTACCTATACCGCTGTTTGCTCTCATCCCAAAAGTTGTGCTCCTCAGTAAAGGCTTATTCCACAGTTGCTATTGCATAATTATGTATCAAGTTTGaggatattttttatttcagaaggaaaaaaaaaatcctttcttCTTTTGGAAAGAGCTCTTAATGCTGCATGAAAATAGCACTCCTTGCCAAAGCAACAACTCAATTCTTAAAACCAAAATAACAACAATGCCTCTCCCCCTCTGTCAGAGAGGTATTCAGCTCCCAGACATTGAAGAATACAGCTCCACCCCATCTCTCTCAGCTTGATAGCAtttcatctttatttatttatacgaCAGATGCTATTCCGACCCATCTcccaaataacaaaaacaacatccCTGCCAGACCATTTTAATGCATACATAAGAAGATTATTGGAATAGTGTTTGTTGTCAATTGTGAACGTCTGCCTCGATTTCTGTTAAGGATATATTGCTTTTTTAAGATACAGTGTTTGCTATATCCTGTCCCTGATTTAAGAAAGTTAGTGGATTAGAGAGGAGGAAATACTTTACTTCTTAAGCACAAGTCATATTTTAATTACCTTTCAGTGAGTCCCTTCAGAACACAGCACCTTATGAGGGTGTCAGTGGAGATGGGTGGGTAGATCGAACAATGCACGTTAGCGGAAGCAAATCATTgtggatttttaaaatgtttaaaaatattaacataaaatatgaatatgaaatgaGTAACATGCTTTGTTCTTACTGGTTTGAGGAATAGTACGTCTGTgtgtacagtactgtatgtgcatgagTGCAGGGGTTTGTCACTTAATGGATGCCCatgtaatgttttatttatttcactggGTTATTGCCAGTGATTGATGTTATAAAGTATTTGTAGTCAACATGATTTCCAGGATCTGACAATCACCTACACCAGTTTCCCTGGATCCTTGCATTCCTTGtcaattttcatttattgtataTACAATATTAGAAACCTACAAAATAGTTTGACCTGCTGAATTGAGATTAAAGATATAATAACTTCA

Function

symbol description
epm2a Predicted to enable protein tyrosine phosphatase activity. Predicted to act upstream of or within protein dephosphorylation. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in Lafora disease and progressive myoclonus epilepsy. Orthologous to human EPM2A (EPM2A glucan phosphatase, laforin).

NR:

description
laforin

GO: NA

KEGG:

id description
K14165 K14165; atypical dual specificity phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782183.1 True 2832 mRNA 0.42 4 20628841 20638714
XM_039782184.1 False 2807 mRNA 0.42 4 20628842 20638714
XM_039782185.1 False 2440 mRNA 0.41 4 20629229 20638714

Neighbor

gene id symbol gene type direction distance location
LOC120546927 LOC104961664 coding upstream 6210 20617250 ~ 20622631 (+)
slc22a16 slc22a16 coding upstream 635955 19977864 ~ 19992886 (+)
cdc40 cdc40,LOC103135076 coding upstream 684810 19919473 ~ 19944031 (+)
LOC120546286 gpr6,LOC104945012 coding upstream 791443 19834485 ~ 19837398 (+)
fig4a fig4,LOC102794534 coding upstream 797998 19745177 ~ 19830843 (+)
LOC120547338 NA coding downstream 239766 20878480 ~ 20881587 (+)
mthfd1l mthfd1l coding downstream 252694 20891408 ~ 20928761 (+)
akap12b akap12,LOC102289546,LOC102211499,LOC102799877 coding downstream 298804 20937518 ~ 20980163 (+)
armt1 armt1 coding downstream 353752 20992466 ~ 20996625 (+)
esr1 esr1 coding downstream 360860 20999574 ~ 21012236 (+)
LOC120546929 NA non-coding upstream 576 20626548 ~ 20628265 (+)
LOC120546242 NA non-coding upstream 269232 20261785 ~ 20359609 (+)
G185869 mettl24 non-coding upstream 648751 19945093 ~ 19980090 (+)
LOC120546509 NA non-coding upstream 655498 19950611 ~ 19973343 (+)
G185827 NA non-coding upstream 777130 19850174 ~ 19851711 (+)
G186025 NA non-coding downstream 54456 20693170 ~ 20702644 (+)
G186035 utrn non-coding downstream 107603 20746317 ~ 20758806 (+)
LOC120546176 NA non-coding downstream 350591 20989305 ~ 20991418 (+)
G186088 LOC103355013 non-coding downstream 381107 21019821 ~ 21023878 (+)
G186094 syne1,LOC103355013,LOC106946714 non-coding downstream 393927 21032641 ~ 21033182 (+)
kif25 LOC104961976,LOC100703631 other upstream 768624 19852643 ~ 19860217 (+)
acp1 acp1 other upstream 980685 19633500 ~ 19648156 (+)
zgc:193593 NA other upstream 1008058 19572573 ~ 19620783 (+)
nhsl1b nhsl1,LOC101470763 other upstream 1087009 19429595 ~ 19541832 (+)
si:dkey-206f10.1 LOC103360989,LOC103380838 other upstream 1239618 19367720 ~ 19389223 (+)
gtf2h5 gtf2h5 other downstream 532234 21170948 ~ 21172639 (+)
erh erh,LOC100699790,LOC101174968 other downstream 1306029 21944743 ~ 21947000 (+)
G186394 mycn,LOC108233328 other downstream 1347065 21985779 ~ 22065589 (+)
lin28b lin28b other downstream 1642253 22280967 ~ 22301585 (+)
kcns3b kcns3,LOC103372653 other downstream 2169165 22807879 ~ 22810520 (+)

Expression


Co-expression Network