hsp90aa1.2 (LOC107100300,LOC103369947,LOC105919227,LOC103155532,LOC103457915)


Basic Information

Item Value
gene id hsp90aa1.2
gene name LOC107100300,LOC103369947,LOC105919227,LOC103155532,LOC103457915
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 15135367 ~ 15141393 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782224.1
GATTCCAGATGGTTCTGGAAGCTCAGGTCAGGATTTCTCGAATGCTCGGAAAGGATAGAAAAGCTGCACAGCTATCGTGAACCTGTTAGTTAGCCGGGTTGTCCGCGACTGGAACGACTTCCATACATTTCACAGTGGAGTTTTCCATACACTGAGGGTCAAGATGCCTGAATCACACGACCAACCAATGGAGGAGGAGGCTGAGACCTTTGCATTCCAGGCTGAGATTGCTCAGCTGATGTCCCTGATCATCAACACTTTCTATTCCAACAAAGAGATCTTCCTTAGGGAGCTTATCTCCAACTCCTCAGATGCCCTGGACAAAATCCGCTATGAGAGTCTCACTGACCCCACCAAGCTAGATACTAACAAGGATCTCAAAATCGAAATAATTCCCAACAAAGAGGAACGCACCCTGACCCTGATTGATACGGGTATCGGCATGACCAAGGCTGATCTGATCAACAATCTGGGCACAATCGCCAAGTCTGGCACCAAGGCTTTCATGGAGGCTCTGCAGGCTGGAGCCGACATCTCCATGATCGGTCAGTTTGGTGTGGGTTTCTACTCTGCCTACCTCGTGGCTGAGAAGGTGACAGTCTTAACCAAGCACAATGATGACGAGCAGTACGCCTGGGAATCCTCTGCTGGAGGCTCATTCACAGTTAAAGTGGACAACTCTGAGCCCTTGGGGCGTGGCACCAAGGTGATCCTGCACTTGAAAGAAGACCAGATGGAATACATTGAGGAGCGAAGAATCAAAGAGATCGTTAAAAAGCACTCACAGTTCATTGGCTATCCCATCACGCTCTTTGTGGAGAAAGAGCGTGACAAGGAGGTGAGTGACGAtgaggcagaggaggaggaggagaaggagaaagagaaggatgatgaagaagaggagaaggacGAGGACAAGCCTGAGATTGAGGACGTCGGGTCCGATGAGGAGCATGACCACGACAAGTGTTcagacaaaaagaagaagaagaagaagatcaaGGAGAAGTACATTGACCAGGAAGAGCTGAACAAGACCAAACCCCTGTGGACCCGTAACCCTGACGACATCACCAATGAGGAGTATGGAGAGTTCTACAAGAGTCTCACCAACGACTGGGAGGACCACCTGGCTGTCAAGCACTTTTCAGTGGAGGGTCAGCTGGAATTCCGCGCGCTGCTCTTTGTGCCTCGTCGCGCTCCCTTCGACCTCTttgagaacaagaagaagaagaacaacatCAAGCTGTACGTGCGCAGGGTCTTCATCATGGACAACTGCGACGAGCTCATCCCCGAGTACCTCAATTTCATCAGGGGTGTGGTGGACTCTGAGGATCTGCCCCTGAACATCTCCAGAGAGATGCTGCAGCAGAGCAAGATCCTGAAAGTCATCCGCAAAAACCTGGTCAAGAAGTGCCTGGAACTCTTCACCGAACTCGCCGAGGACAAGGACAACTACAAAAAGTACTACGAGCAGTTCTCCAAGAACATCAAGCTTGGCATCCACGAGGATtctcaaaacaaaaagaggCTGTCTGAGCTGCTGAGATACTACACCTCGGCTTCTGGAGATGAGCTGGTGTCCCTGAAGGACTATGTTACACGTATGAAGGACAACCAGAAACACATCTACTACATCACTGGTGAGACCAAAGACCAGGTGGCGAACTCTGCCTTCGTGGAGCGCCTTAGCAAAGCCGGCCTTGAGGTCATCTACATGATCGAGCCCATCGATGAGTACTGTGTccagcagctgaaggagtttGAGGGAAAAAACCTGGTCTCAGTGACCAAGGAAGGCCTGGAGCTGCCCGAggatgaggaagagaagaagaagcaggaggagaagaaggcTCAGTTTGAGAACTTGTGCAAGATAATGAAGGATATCTTGGAGAAGAAGGTGGAGAAGGTCACAGTCTCCAATCGCCTGGTCTCCTCCCCCTGCTGCATCGTCACCAGCACCTACGGCTGGACGGCCAACATGGAGAGGATCATGAAGGCCCAGGCTCTGAGGGACAACTCCACTATGGGCTACATGGCCGCTAAAAAGCACCTTGAGATCAACCCTGAACACCCCATCGTGGAGACCCTGAGGCAGAAGGCAGAGGCTGATAAGAATGACAAGTCTGTGAAGGATCTAGTCATCCTGCTCTTTGAGACTGCCCTGCTGTCTTCAGGATTTACTTtggaggacccccagacccacTCCAATCGCATTTACAGAATGATCAAGCTGGGTCTTGgcaTTGATGAAGATGATCTGACACCAGAGGAAGTCACCTCAGCACCCACTGAGGAAATGCCCCCTCTAGAAGGGGACGATGATGACACATCCAGGATGGAGGAGGTGGACTAGGCCTGTTTCTACCGCCTGTTAGTGTTCAAAAGTAGTGTTACATAAAACTTCAAGTTTAATGTTGTAAATGAGCCTGGGGTGGCCCTCCCCTCAACCTCCTTTTGACCAAATTCACTTTTATTTCCCCTTGCATTGACCAAACCTGGAGTTCATATTAATTCCTTTTTTAAGTTGTCACATTTTCTAACTTGAGTTTCATCAATgcaattatttttctatttattgaCATTCCAGTGTACTTTGTGTTTTCTTAATTTAACTGTAAATATATCAAAATTGGTGGAACACATAAAATAAAGATTTACCATGTTAACAA

Function

NR:

description
PREDICTED: heat shock protein HSP 90-alpha

GO:

id name namespace
GO:0006950 response to stress biological_process
GO:0006457 protein folding biological_process
GO:0005524 ATP binding molecular_function
GO:0051082 unfolded protein binding molecular_function

KEGG:

id description
K04079 HSP90A, htpG; molecular chaperone HtpG

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782224.1 True 2678 mRNA 0.49 11 15135367 15141393

Neighbor

gene id symbol gene type direction distance location
mgat2 mgat2 coding upstream 18583 15113170 ~ 15116784 (+)
LOC120546410 NA coding upstream 180451 14938918 ~ 14954916 (+)
faua fau coding upstream 433214 14699966 ~ 14702153 (+)
prpf39 prpf39 coding upstream 435874 14682241 ~ 14699493 (+)
LOC120546154 LOC104941296,LOC103359897,LOC103457903,LOC103152668,LOC102206909,LOC100705127,LOC106954560 coding upstream 500907 14629113 ~ 14634460 (+)
ppp2r5cb LOC103369946,LOC101473650,LOC100694131,LOC104924693 coding downstream 1310 15142703 ~ 15173582 (+)
slc25a29 LOC103369942,LOC106518591 coding downstream 136192 15277585 ~ 15286851 (+)
vrtn vrtn coding downstream 154888 15296281 ~ 15300707 (+)
dll4 dll4,LOC104955063 coding downstream 446690 15588083 ~ 15597893 (+)
chac1 chac1 coding downstream 460942 15602335 ~ 15604166 (+)
G184389 NA non-coding upstream 23762 15110243 ~ 15111605 (+)
G184390 NA non-coding upstream 25290 15109634 ~ 15110077 (+)
G184345 NA non-coding upstream 467780 14667226 ~ 14667587 (+)
G184343 NA non-coding upstream 472886 14662094 ~ 14662481 (+)
G184342 NA non-coding upstream 474237 14660746 ~ 14661130 (+)
G184419 NA non-coding downstream 32297 15173690 ~ 15174130 (+)
G184431 NA non-coding downstream 60913 15202306 ~ 15202515 (+)
LOC120547009 NA non-coding downstream 115740 15257133 ~ 15264717 (+)
G184461 NA non-coding downstream 178625 15320018 ~ 15320239 (+)
G184463 NA non-coding downstream 180353 15321746 ~ 15322122 (+)
hsp90aa1.1 LOC103369948 other upstream 507 15129476 ~ 15134860 (+)
G184258 NA other upstream 605997 14525136 ~ 14529370 (+)
LOC120546619 LOC103359912,LOC102080314 other upstream 710503 14393440 ~ 14424864 (+)
G184231 NA other upstream 754180 14362341 ~ 14381187 (+)
LOC120546742 plcb1 other upstream 994598 14024484 ~ 14140769 (+)
LOC120546207 NA other downstream 148281 15289674 ~ 15293252 (+)
G184458 NA other downstream 160532 15301925 ~ 15318836 (+)
rhov rhov,LOC102778135,LOC100699098,LOC101469787,LOC102306362,LOC107602886 other downstream 519180 15660573 ~ 15663661 (+)
dpf3 LOC100693327,LOC101467145,LOC103380755,LOC104966071,LOC102779461 other downstream 553551 15694944 ~ 15719632 (+)
LOC120546249 NA other downstream 773193 15914586 ~ 15968123 (+)

Expression


Co-expression Network