yy1b (LOC101066055,LOC104919809,LOC102203025,LOC101483827,LOC100706360)


Basic Information

Item Value
gene id yy1b
gene name LOC101066055,LOC104919809,LOC102203025,LOC101483827,LOC100706360
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 14494769 ~ 14500520 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782354.1
AGTGGCAACGAGAACTGCCTTGGGACGGAGTGCAGAGAGTTGTTATCGAAGAAGAGGGAGAACAGACAGAGGCAGGAGCAAAGCTGgggggtgtgtgagtgtgtttgtgaggtCAAAAAAGGAGTACAACACGGCGTGAATGAGACAAGCAAGCTGGCGGACTTCAACATGGCATCCGGAGATACGCTGTACATTGAGGCAGACGGCTCGGAGATGCCGGCCGAAATCGTGGAGCTCCACGAGATAGAGGTGGAAACGATACCAGTGGAGACTATCGAGACCACGGTGGTCGGCGGGGATGACGACGATGAAGACGACGAAGACGACGACGACGAAGATGGGCAGCCCATGATCGCGCTCCAGCCGCTGGTCTCTGACGACCCCAACTCgatccaccaccaccaccatcaccaccaccaccaccaccaggaGGTGATCCTGGTACAGACCCGGGAGGAGGTGGTCGGTGGAGATGACTCGGACCTGCACACAGACGGCGGGAGCGGGTTCGAGGACCAGATCCTCATCCCGGTACCGACTCCGGGGGTGGAGGACGAGTACATCGAACAGACTTTGGTGACTGTGGCTGGGAAAAGCTCAGTAGGTCGGATGAAACGGGGAGGCGGCACTGGTGGCAAGAAAGCGGGCAAAAAGAGCTATTTAAGCGGTGCGGAGGCTGGCGGAAGAAAATGGGAACAGAAGCAGGTGCAAATAAAGACACTGGAGGGGGAATTTTCTGTTACAATGTGGGCATCGGATGACAATAAAGACATTGACCATGAGTCAGTGGTGGAGGAGCAGATCGTCGGGGAGAACTCTCCTCCAGACTACTCCGAGTACATGACAGGGAAAAAGCTGCCCCCTGGTGGTATCCCGGGCATCGACCTCTCAGACCCCAAACAGCTGGCCGAGTTTGccagGATGAAGCCCAGGAAAGTCAAAGAGGACGATGCTCCGCGGACGATAGCTTGCCCTCATAAAGGCTGCACAAAGATGTTCAGGGATAACTCGGCCATGAGGAAGCACCTCCACACCCACGGACCCCGCGTGCACGTCTGCGCCGAGTGCGGCAAGGCATTTGTCGAGAGCTCCAAACTCAAACGTCACCAACTTGTTCACACAGGGGAGAAACCCTTCCAGtgtacATTTGAAGGTTGCGGGAAAAGGTTTTCTCTGGACTTCAACCTGCGCACACATGTGCGGATCCACACTGGAGACCGACCCTACGTCTGCCCTTTCGACGGTTGCAACAAGAAGTTTGCGCAGTCAACCAACCTAAAGtctcacattctcacacacGCCAAAGCCAAAAATAACCAATGAGAACCCATCCACCAGCGTCAAGCCACACAGACGGAAAAAAAAGAGCATCCTGGCGGCACACACGAAACCTCTTTTGAGGACGGAATGAAACGCTTAAGACTTATTGATTTATATGAAAACAATCTGACAGATTAAAAGACTTAAAAACACTGAAATTCAGCTAGTTTTCCTGTGTCCCCTTCCTTCTGCTGTCATATTGGATCAGGAACACAGTGACTAGTCCCCAAATCCCCCGGCCTACACAGTCCCTTTGTTTCTCCAGTGGCACTGAGCTGCCAGAAGATGGAACTCATGGACAAACATCAGAGACTTATTTTTACCAGAGTGAGGAGAGAAGCAGCAATCtattagtatttttattttctcacaTAGCTCTCATTTTCATTGAGTGTGCATATTGTACACTTGTCTCAGGCTATGTTCAGTAAaatgtgattattatttttttcccccacctgCATTATGAGATCGTACCTATGATACAAATAGCCCCCCCCCTCGGCCTGGTGTGACCCGTTTCACTTGTATGAGAAGTTTAAAAACAGCTGTATGTTTGTATTTCCATACCCTCTTCAGTTGTATTTTTCTCTAACCACAAAATAACCGTGTATACTTGTATTGTATGGCTGTATTGAAATTACGTAGACATAGATAGAGGTGTGATTTAAAGTGTTAACCAATGAAACTTTTAGTCATGAGTTGCTTTATATTTTCTATGAACTGTCTTTACACAAACGAATGAGTAATATAAACTTGGTCACAGCGTGTCTCAGTTGAAGCATCTGGAGCGTACACTGAATTGACTGCGAGACCATCACTTACTTTGTCAGAATGTAATGTACAGACGTCAACCATTAACTTCCTTTGTTGATATTTACACCCATGTATCTCAACTGCCCACAATAAAATGGCTCATTCAACCCTGTCGAAATATA
>XM_039782355.1
GTGGCAACGAGAACTGCCTTGGGACGGAGTGCAGAGAGTTGTTATCGAAGAAGAGGGAGAACAGACAGAGGCAGGAGCAAAGCTGgggggtgtgtgagtgtgtttgtgaggtCAAAAAAGGAGTACAACACGGCGTGAATGAGACAAGCAAGCTGGCGGACTTCAACATGGCATCCGGAGATACGCTGTACATTGAGGCAGACGGCTCGGAGATGCCGGCCGAAATCGTGGAGCTCCACGAGATAGAGGTGGAAACGATACCAGTGGAGACTATCGAGACCACGGTGGTCGGCGGGGATGACGACGATGAAGACGACGAAGACGACGACGACGAAGATGGGCAGCCCATGATCGCGCTCCAGCCGCTGGTCTCTGACGACCCCAACTCgatccaccaccaccaccatcaccaccaccaccaccaccaggaGGTGATCCTGGTACAGACCCGGGAGGAGGTGGTCGGTGGAGATGACTCGGACCTGCACACAGACGGCGGGAGCGGGTTCGAGGACCAGATCCTCATCCCGGTACCGACTCCGGGGGTGGAGGACGAGTACATCGAACAGACTTTGGTGACTGTGGCTGGGAAAAGCTCAGTAGGTCGGATGAAACGGGGAGGCGGCACTGGTGGCAAGAAAGCGGGCAAAAAGAGCTATTTAAGCGGTGCGGAGGCTGGCGGAAGAAAATGGGAACAGAAGCAGGTGCAAATAAAGACACTGGAGGGGGAATTTTCTGTTACAATGTGGGCATCGGACATTGACCATGAGTCAGTGGTGGAGGAGCAGATCGTCGGGGAGAACTCTCCTCCAGACTACTCCGAGTACATGACAGGGAAAAAGCTGCCCCCTGGTGGTATCCCGGGCATCGACCTCTCAGACCCCAAACAGCTGGCCGAGTTTGccagGATGAAGCCCAGGAAAGTCAAAGAGGACGATGCTCCGCGGACGATAGCTTGCCCTCATAAAGGCTGCACAAAGATGTTCAGGGATAACTCGGCCATGAGGAAGCACCTCCACACCCACGGACCCCGCGTGCACGTCTGCGCCGAGTGCGGCAAGGCATTTGTCGAGAGCTCCAAACTCAAACGTCACCAACTTGTTCACACAGGGGAGAAACCCTTCCAGtgtacATTTGAAGGTTGCGGGAAAAGGTTTTCTCTGGACTTCAACCTGCGCACACATGTGCGGATCCACACTGGAGACCGACCCTACGTCTGCCCTTTCGACGGTTGCAACAAGAAGTTTGCGCAGTCAACCAACCTAAAGtctcacattctcacacacGCCAAAGCCAAAAATAACCAATGAGAACCCATCCACCAGCGTCAAGCCACACAGACGGAAAAAAAAGAGCATCCTGGCGGCACACACGAAACCTCTTTTGAGGACGGAATGAAACGCTTAAGACTTATTGATTTATATGAAAACAATCTGACAGATTAAAAGACTTAAAAACACTGAAATTCAGCTAGTTTTCCTGTGTCCCCTTCCTTCTGCTGTCATATTGGATCAGGAACACAGTGACTAGTCCCCAAATCCCCCGGCCTACACAGTCCCTTTGTTTCTCCAGTGGCACTGAGCTGCCAGAAGATGGAACTCATGGACAAACATCAGAGACTTATTTTTACCAGAGTGAGGAGAGAAGCAGCAATCtattagtatttttattttctcacaTAGCTCTCATTTTCATTGAGTGTGCATATTGTACACTTGTCTCAGGCTATGTTCAGTAAaatgtgattattatttttttcccccacctgCATTATGAGATCGTACCTATGATACAAATAGCCCCCCCCCTCGGCCTGGTGTGACCCGTTTCACTTGTATGAGAAGTTTAAAAACAGCTGTATGTTTGTATTTCCATACCCTCTTCAGTTGTATTTTTCTCTAACCACAAAATAACCGTGTATACTTGTATTGTATGGCTGTATTGAAATTACGTAGACATAGATAGAGGTGTGATTTAAAGTGTTAACCAATGAAACTTTTAGTCATGAGTTGCTTTATATTTTCTATGAACTGTCTTTACACAAACGAATGAGTAATATAAACTTGGTCACAGCGTGTCTCAGTTGAAGCATCTGGAGCGTACACTGAATTGACTGCGAGACCATCACTTACTTTGTCAGAATGTAATGTACAGACGTCAACCATTAACTTCCTTTGTTGATATTTACACCCATGTATCTCAACTGCCCACAATAAAATGGCTCATTCAACCCTGTCGAAATATA

Function

NR:

description
PREDICTED: transcriptional repressor protein YY1-like isoform X1

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K09201 YY; transcription factor YY

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782354.1 True 2258 mRNA 0.49 5 14494769 14500520
XM_039782355.1 False 2245 mRNA 0.49 5 14494770 14500520

Neighbor

gene id symbol gene type direction distance location
evlb LOC102297057 coding upstream 1149 14442193 ~ 14493620 (+)
LOC120546620 NA coding upstream 55253 14427564 ~ 14439516 (+)
LOC120547018 LOC100697584,LOC101486653,LOC103373760 coding upstream 159127 14329618 ~ 14335642 (+)
lamp5 lamp5 coding upstream 254171 14235279 ~ 14240598 (+)
LOC120546497 NA coding upstream 259778 14232278 ~ 14234991 (+)
LOC120547075 LOC103359908,LOC104919811,LOC101483143,LOC100706096,LOC102294806 coding downstream 28951 14529471 ~ 14537267 (+)
LOC120546629 NA coding downstream 40095 14540615 ~ 14548931 (+)
LOC120547239 c7h14orf37,LOC107717645,LOC107659812 coding downstream 94641 14595161 ~ 14602820 (+)
LOC120546154 LOC104941296,LOC103359897,LOC103457903,LOC103152668,LOC102206909,LOC100705127,LOC106954560 coding downstream 128593 14629113 ~ 14634460 (+)
prpf39 prpf39 coding downstream 181721 14682241 ~ 14699493 (+)
G184235 NA non-coding upstream 124001 14370124 ~ 14370768 (+)
LOC120547176 NA non-coding upstream 506113 13952385 ~ 13988656 (+)
G184128 NA non-coding upstream 603853 13889301 ~ 13890916 (+)
G184085 fkbp1b,LOC102794993 non-coding upstream 1026682 13458602 ~ 13468087 (+)
G184078 mut non-coding upstream 1045670 13443043 ~ 13449099 (+)
G184263 NA non-coding downstream 58022 14558542 ~ 14606665 (+)
G184339 NA non-coding downstream 155114 14655634 ~ 14656247 (+)
G184341 NA non-coding downstream 159799 14660319 ~ 14660735 (+)
G184342 NA non-coding downstream 160226 14660746 ~ 14661130 (+)
G184343 NA non-coding downstream 161574 14662094 ~ 14662481 (+)
LOC120546619 LOC103359912,LOC102080314 other upstream 69905 14393440 ~ 14424864 (+)
G184231 NA other upstream 113582 14362341 ~ 14381187 (+)
LOC120546742 plcb1 other upstream 354000 14024484 ~ 14140769 (+)
LOC120546706 wdcp other upstream 1020610 13468235 ~ 13474159 (+)
G183994 phip other upstream 1247353 13145475 ~ 13247416 (+)
G184258 NA other downstream 24616 14525136 ~ 14529370 (+)
hsp90aa1.1 LOC103369948 other downstream 628956 15129476 ~ 15134860 (+)
LOC120546207 NA other downstream 789154 15289674 ~ 15293252 (+)
G184458 NA other downstream 801405 15301925 ~ 15318836 (+)
rhov rhov,LOC102778135,LOC100699098,LOC101469787,LOC102306362,LOC107602886 other downstream 1160053 15660573 ~ 15663661 (+)

Expression


Co-expression Network