LOC120547018 (LOC100697584,LOC101486653,LOC103373760)


Basic Information

Item Value
gene id LOC120547018
gene name LOC100697584,LOC101486653,LOC103373760
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 14329618 ~ 14335642 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782361.1
ATGACACAAATCACTGAAACTATTGTCTCCACATTTTCCATCTAAATATGAATGCTTGAATTTTTGCTTTTGTCAAACGGCCATGTTTGCAACTGCAAGTTGGTGTCCTCCATCCTGTCcaccctctctcttcctcataTCTCTGCCCTGGCCCCTGACCCTGACCCTGATCCTTCTATCTCTCCAtcttccccctctcctcctcactctCAGCATTCTGAAGCTCTGTGTGGCAGCTGCCCGTCCTCTGGTTCTGCCCCACAGGCTAACAGCATTTGGCCGAGCCTGCCGCAGCCCGGAGCTGGTTTCCCTGCATGGCCAGGACAACCAGGACAGTCCACCCAGCCTGCACCGTGCTGGACTGGCCAGCCAAACACACCCTGCTGGCCTGGGACAACACCAGCTCCGGTATCTGTCCCTCAAGCCATGACACCAGCCCCTGCACCTAGCACAAACGTAGTTCAAGCTCCAGCTCAAGTTCCAGCTCCAGCTGCAGGGCAGCCCTGCCAGCCCTGCTGGCCAGGCACCCAGTACCAACCTTCCCAGTACCAACCTCCCCAGTACCAACCTTCCCAGTATCAGCCTCCTCAGTACCAGCCTCCTCAGTACCAGCCTCCGCAGTATCAGCCTCCCCAGCAACCAGCTCCAGTTCAAGCTCAAGTCCCTACTCAAATTCCAGCTCCAACTCCAGTTTCAGTCCCAGTCCCAGCACCTGCTCCTGCTACCAGCATCCGTCCAAATGTACCAGGATGGCCTGCCCACCCTGGCTGGCCCTATAACCCAGGACAGTCAGGATGGCCTGGGCAGAGTCCATCTGCCATGCCTCCACACTGGCTTCCACCCACATCTGGACCTCTTAGTGTGCCATACAACTTGAACCTGGCCCGAGGGATCTATGACAAGATGATGATGACCATCTTGGGCCATGTCAAACCCAATGCAAAAATGTTCACAGTGAACTTTCTGAGAGGCAACGACATCGCCTTTCACATCAACCCCCGCTTCAGTGAGGGGGGCAAACAGGCGTTGGTCCGTAACCACAAACTGGCTGAGCGCTGGGGACCAGAGGAGAGGGACCTGAATGGACCCTTCCCCTTCGCTCAAGGGAGCCCATTTGAGATGAAGATCCTGTGCACTCAAGAGACGTTCAGGGTGGCAGTGAACAACATCCCACTGTTTGAGTTCCGACACCGAATCAGAGAGCTCAACCAGATTGACAGAATCAACATCCTGCATGATGTCGTCCTCACCTGCGTCAATGTGGAGACACTTCCATAGGAAGCACACTATTACTCATGCAGTACATGAATCAATACATCGAGGACACAGACATGTATGAGCATGTTGTAAATGCACATGAGCAGAAATGCATACAAAGACAcatataaaaatgtatcagGAAGCTTCAAGATCGAACAAATGTGTTAATACGGGATGTCATATTAATTATGGCATGAGCTGAGCTCATTCTATATGCTACTTCCTCTACCACATAGCTAACATTTAATACATATACAAACATTCCTATTCTCTATGCAGATGCTACTGTATTTGTTGTATACAATAGTTTCTATATTATTAAATTGCTACTAACTGAGAATTATAGATGTGTTAATAttgccataaaaaaaacaatactgtcTATTAGATATCCATTAGGGTTCTGTTAACTGTACTAATtcttaaataaaactatcagtCAAAAATCTG
>XM_039782362.1
TGTGCTCGGCTAACAAGCTGACTGATTCACTTTAACTACACCACGGCCTGCAGCCTGCTCCTGTGTGCACCTGAGGACTAAAGACCAGAAAAGaaaaagCTGTACGTAATCTTCTTCTGGCAGGCAGCATGGATTTGGTGTCCTCCATCCTGTCcaccctctctcttcctcataTCTCTGCCCTGGCCCCTGACCCTGACCCTGATCCTTCTATCTCTCCAtcttccccctctcctcctcactctCAGCATTCTGAAGCTCTGTGTGGCAGCTGCCCGTCCTCTGGTTCTGCCCCACAGGCTAACAGCATTTGGCCGAGCCTGCCGCAGCCCGGAGCTGGTTTCCCTGCATGGCCAGGACAACCAGGACAGTCCACCCAGCCTGCACCGTGCTGGACTGGCCAGCCAAACACACCCTGCTGGCCTGGGACAACACCAGCTCCGGTATCTGTCCCTCAAGCCATGACACCAGCCCCTGCACCTAGCACAAACGTAGTTCAAGCTCCAGCTCAAGTTCCAGCTCCAGCTGCAGGGCAGCCCTGCCAGCCCTGCTGGCCAGGCACCCAGTACCAACCTTCCCAGTACCAACCTCCCCAGTACCAACCTTCCCAGTATCAGCCTCCTCAGTACCAGCCTCCTCAGTACCAGCCTCCGCAGTATCAGCCTCCCCAGCAACCAGCTCCAGTTCAAGCTCAAGTCCCTACTCAAATTCCAGCTCCAACTCCAGTTTCAGTCCCAGTCCCAGCACCTGCTCCTGCTACCAGCATCCGTCCAAATGTACCAGGATGGCCTGCCCACCCTGGCTGGCCCTATAACCCAGGACAGTCAGGATGGCCTGGGCAGAGTCCATCTGCCATGCCTCCACACTGGCTTCCACCCACATCTGGACCTCTTAGTGTGCCATACAACTTGAACCTGGCCCGAGGGATCTATGACAAGATGATGATGACCATCTTGGGCCATGTCAAACCCAATGCAAAAATGTTCACAGTGAACTTTCTGAGAGGCAACGACATCGCCTTTCACATCAACCCCCGCTTCAGTGAGGGGGGCAAACAGGCGTTGGTCCGTAACCACAAACTGGCTGAGCGCTGGGGACCAGAGGAGAGGGACCTGAATGGACCCTTCCCCTTCGCTCAAGGGAGCCCATTTGAGATGAAGATCCTGTGCACTCAAGAGACGTTCAGGGTGGCAGTGAACAACATCCCACTGTTTGAGTTCCGACACCGAATCAGAGAGCTCAACCAGATTGACAGAATCAACATCCTGCATGATGTCGTCCTCACCTGCGTCAATGTGGAGACACTTCCATAGGAAGCACACTATTACTCATGCAGTACATGAATCAATACATCGAGGACACAGACATGTATGAGCATGTTGTAAATGCACATGAGCAGAAATGCATACAAAGACAcatataaaaatgtatcagGAAGCTTCAAGATCGAACAAATGTGTTAATACGGGATGTCATATTAATTATGGCATGAGCTGAGCTCATTCTATATGCTACTTCCTCTACCACATAGCTAACATTTAATACATATACAAACATTCCTATTCTCTATGCAGATGCTACTGTATTTGTTGTATACAATAGTTTCTATATTATTAAATTGCTACTAACTGAGAATTATAGATGTGTTAATAttgccataaaaaaaacaatactgtcTATTAGATATCCATTAGGGTTCTGTTAACTGTACTAATtcttaaataaaactatcagtCAAAAATCTG
>XM_039782363.1
ATGACACAAATCACTGAAACTATTGTCTCCACATTTTCCATCTAAATATGAATGCTTGAATTTTTGCTTTTGTCAAACGGCCATGTTTGCAACTGCAAGTTGGTGTCCTCCATCCTGTCcaccctctctcttcctcataTCTCTGCCCTGGCCCCTGACCCTGACCCTGATCCTTCTATCTCTCCAtcttccccctctcctcctcactctCAGCATTCTGAAGCTCTGTGTGGCAGCTGCCCGTCCTCTGGTTCTGCCCCACAGGCTAACAGCATTTGGCCGAGCCTGCCGCAGCCCGGAGCTGGTTTCCCTGCATGGCCAGGACAACCAGGACAGTCCACCCAGCCTGCACCGTGCTGGACTGGCCAGCCAAACACACCCTGCTGGCCTGGGACAACACCAGCTCCGGTATCTGTCCCTCAAGCCATGACACCAGCCCCTGCACCTAGCACAAACGTAGTTCAAGCTCCAGCTCAAGTTCCAGCTCCAGCTGCAGGGCAGCCCTGCCAGCCCTGCTGGCCAGGCACCCAGTACCAACCTTCCCAGTACCAACCTCCCCAGTACCAACCTTCCCAGTATCAGCCTCCTCAGTACCAGCCTCCTCAGTACCAGCCTCCGCAGTATCAGCCTCCCCAGCAACCAGCTCCAGTTCAAGCTCAAGTCCCTACTCAAATTCCAGCTCCAACTCCAGTTTCAGTCCCAGTCCCAGCACCTGCTCCTGCTACCAGCATCCGTCCAAATGTACCAGGATGGCCTGCCCACCCTGGCTGGCCCTATAACCCAGGACAGTCAGGATGGCCTGGGCAGAGTCCATCTGCCATGCCTCCACACTGGCTTCCACCCACATCTGGACCTCTTAGTGTGCCATACAACTTGAACCTGGCCCGAGGGATCTATGACAAGATGATGATGACCATCTTGGGCCATGTCAAACCCAATGCAAAAATGTTCACAGTGAACTTTCTGAGAGGCAACGACATCGCCTTTCACATCAACCCCCGCTTCAGTGAGGGGGGCAAACAGGCGTTGGTCCGTAACCACAAACTGGCTGAGCGCTGGGGACCAGAGGAGAGGGACCTGAATGGACCCTTCCCCTTCGCTCAAGGGAGCCCATTTGAGGCTAACGTTTGGAAAAGATGGAAAGGGTTGGAAAGTCGTTTGTGCAAGCGGGTCCTAGATAAGGGAACTGCTGCACTGCAGGAAGACTCCTGGAGATGAAGATCCTGTGCACTCAAGAGACGTTCAGGGTGGCAGTGAACAACATCCCACTGTTTGAGTTCCGACACCGAATCAGAGAGCTCAACCAGATTGACAGAATCAACATCC
>XM_039782364.1
TGTGCTCGGCTAACAAGCTGACTGATTCACTTTAACTACACCACGGCCTGCAGCCTGCTCCTGTGTGCACCTGAGGACTAAAGACCAGAAAAGaaaaagCTGTACGTAATCTTCTTCTGGCAGGCAGCATGGATGTAAGTACCTCCTCAAATTCTCAGAACTCTACTCTGCATTCTGAAGCTCTGTGTGGCAGCTGCCCGTCCTCTGGTTCTGCCCCACAGGCTAACAGCATTTGGCCGAGCCTGCCGCAGCCCGGAGCTGGTTTCCCTGCATGGCCAGGACAACCAGGACAGTCCACCCAGCCTGCACCGTGCTGGACTGGCCAGCCAAACACACCCTGCTGGCCTGGGACAACACCAGCTCCGGTATCTGTCCCTCAAGCCATGACACCAGCCCCTGCACCTAGCACAAACGTAGTTCAAGCTCCAGCTCAAGTTCCAGCTCCAGCTGCAGGGCAGCCCTGCCAGCCCTGCTGGCCAGGCACCCAGTACCAACCTTCCCAGTACCAACCTCCCCAGTACCAACCTTCCCAGTATCAGCCTCCTCAGTACCAGCCTCCTCAGTACCAGCCTCCGCAGTATCAGCCTCCCCAGCAACCAGCTCCAGTTCAAGCTCAAGTCCCTACTCAAATTCCAGCTCCAACTCCAGTTTCAGTCCCAGTCCCAGCACCTGCTCCTGCTACCAGCATCCGTCCAAATGTACCAGGATGGCCTGCCCACCCTGGCTGGCCCTATAACCCAGGACAGTCAGGATGGCCTGGGCAGAGTCCATCTGCCATGCCTCCACACTGGCTTCCACCCACATCTGGACCTCTTAGTGTGCCATACAACTTGAACCTGGCCCGAGGGATCTATGACAAGATGATGATGACCATCTTGGGCCATGTCAAACCCAATGCAAAAATGTTCACAGTGAACTTTCTGAGAGGCAACGACATCGCCTTTCACATCAACCCCCGCTTCAGTGAGGGGGGCAAACAGGCGTTGGTCCGTAACCACAAACTGGCTGAGCGCTGGGGACCAGAGGAGAGGGACCTGAATGGACCCTTCCCCTTCGCTCAAGGGAGCCCATTTGAGATGAAGATCCTGTGCACTCAAGAGACGTTCAGGGTGGCAGTGAACAACATCCCACTGTTTGAGTTCCGACACCGAATCAGAGAGCTCAACCAGATTGACAGAATCAACATCCTGCATGATGTCGTCCTCACCTGCGTCAATGTGGAGACACTTCCATAGGAAGCACACTATTACTCATGCAGTACATGAATCAATACATCGAGGACACAGACATGTATGAGCATGTTGTAAATGCACATGAGCAGAAATGCATACAAAGACAcatataaaaatgtatcagGAAGCTTCAAGATCGAACAAATGTGTTAATACGGGATGTCATATTAATTATGGCATGAGCTGAGCTCATTCTATATGCTACTTCCTCTACCACATAGCTAACATTTAATACATATACAAACATTCCTATTCTCTATGCAGATGCTACTGTATTTGTTGTATACAATAGTTTCTATATTATTAAATTGCTACTAACTGAGAATTATAGATGTGTTAATAttgccataaaaaaaacaatactgtcTATTAGATATCCATTAGGGTTCTGTTAACTGTACTAATtcttaaataaaactatcagtCAAAAATCTG
>XM_039782365.1
TGTGCTCGGCTAACAAGCTGACTGATTCACTTTAACTACACCACGGCCTGCAGCCTGCTCCTGTGTGCACCTGAGGACTAAAGACCAGAAAAGaaaaagCTGTACGTAATCTTCTTCTGGCAGGCAGCATGGATCATTCTGAAGCTCTGTGTGGCAGCTGCCCGTCCTCTGGTTCTGCCCCACAGGCTAACAGCATTTGGCCGAGCCTGCCGCAGCCCGGAGCTGGTTTCCCTGCATGGCCAGGACAACCAGGACAGTCCACCCAGCCTGCACCGTGCTGGACTGGCCAGCCAAACACACCCTGCTGGCCTGGGACAACACCAGCTCCGGTATCTGTCCCTCAAGCCATGACACCAGCCCCTGCACCTAGCACAAACGTAGTTCAAGCTCCAGCTCAAGTTCCAGCTCCAGCTGCAGGGCAGCCCTGCCAGCCCTGCTGGCCAGGCACCCAGTACCAACCTTCCCAGTACCAACCTCCCCAGTACCAACCTTCCCAGTATCAGCCTCCTCAGTACCAGCCTCCTCAGTACCAGCCTCCGCAGTATCAGCCTCCCCAGCAACCAGCTCCAGTTCAAGCTCAAGTCCCTACTCAAATTCCAGCTCCAACTCCAGTTTCAGTCCCAGTCCCAGCACCTGCTCCTGCTACCAGCATCCGTCCAAATGTACCAGGATGGCCTGCCCACCCTGGCTGGCCCTATAACCCAGGACAGTCAGGATGGCCTGGGCAGAGTCCATCTGCCATGCCTCCACACTGGCTTCCACCCACATCTGGACCTCTTAGTGTGCCATACAACTTGAACCTGGCCCGAGGGATCTATGACAAGATGATGATGACCATCTTGGGCCATGTCAAACCCAATGCAAAAATGTTCACAGTGAACTTTCTGAGAGGCAACGACATCGCCTTTCACATCAACCCCCGCTTCAGTGAGGGGGGCAAACAGGCGTTGGTCCGTAACCACAAACTGGCTGAGCGCTGGGGACCAGAGGAGAGGGACCTGAATGGACCCTTCCCCTTCGCTCAAGGGAGCCCATTTGAGATGAAGATCCTGTGCACTCAAGAGACGTTCAGGGTGGCAGTGAACAACATCCCACTGTTTGAGTTCCGACACCGAATCAGAGAGCTCAACCAGATTGACAGAATCAACATCCTGCATGATGTCGTCCTCACCTGCGTCAATGTGGAGACACTTCCATAGGAAGCACACTATTACTCATGCAGTACATGAATCAATACATCGAGGACACAGACATGTATGAGCATGTTGTAAATGCACATGAGCAGAAATGCATACAAAGACAcatataaaaatgtatcagGAAGCTTCAAGATCGAACAAATGTGTTAATACGGGATGTCATATTAATTATGGCATGAGCTGAGCTCATTCTATATGCTACTTCCTCTACCACATAGCTAACATTTAATACATATACAAACATTCCTATTCTCTATGCAGATGCTACTGTATTTGTTGTATACAATAGTTTCTATATTATTAAATTGCTACTAACTGAGAATTATAGATGTGTTAATAttgccataaaaaaaacaatactgtcTATTAGATATCCATTAGGGTTCTGTTAACTGTACTAATtcttaaataaaactatcagtCAAAAATCTG
>XM_039782366.1
TGTGCTCGGCTAACAAGCTGACTGATTCACTTTAACTACACCACGGCCTGCAGCCTGCTCCTGTGTGCACCTGAGGACTAAAGACCAGAAAAGaaaaagCTGTACGTAATCTTCTTCTGGCAGGCAGCATGGATGCTAACAGCATTTGGCCGAGCCTGCCGCAGCCCGGAGCTGGTTTCCCTGCATGGCCAGGACAACCAGGACAGTCCACCCAGCCTGCACCGTGCTGGACTGGCCAGCCAAACACACCCTGCTGGCCTGGGACAACACCAGCTCCGGTATCTGTCCCTCAAGCCATGACACCAGCCCCTGCACCTAGCACAAACGTAGTTCAAGCTCCAGCTCAAGTTCCAGCTCCAGCTGCAGGGCAGCCCTGCCAGCCCTGCTGGCCAGGCACCCAGTACCAACCTTCCCAGTACCAACCTCCCCAGTACCAACCTTCCCAGTATCAGCCTCCTCAGTACCAGCCTCCTCAGTACCAGCCTCCGCAGTATCAGCCTCCCCAGCAACCAGCTCCAGTTCAAGCTCAAGTCCCTACTCAAATTCCAGCTCCAACTCCAGTTTCAGTCCCAGTCCCAGCACCTGCTCCTGCTACCAGCATCCGTCCAAATGTACCAGGATGGCCTGCCCACCCTGGCTGGCCCTATAACCCAGGACAGTCAGGATGGCCTGGGCAGAGTCCATCTGCCATGCCTCCACACTGGCTTCCACCCACATCTGGACCTCTTAGTGTGCCATACAACTTGAACCTGGCCCGAGGGATCTATGACAAGATGATGATGACCATCTTGGGCCATGTCAAACCCAATGCAAAAATGTTCACAGTGAACTTTCTGAGAGGCAACGACATCGCCTTTCACATCAACCCCCGCTTCAGTGAGGGGGGCAAACAGGCGTTGGTCCGTAACCACAAACTGGCTGAGCGCTGGGGACCAGAGGAGAGGGACCTGAATGGACCCTTCCCCTTCGCTCAAGGGAGCCCATTTGAGATGAAGATCCTGTGCACTCAAGAGACGTTCAGGGTGGCAGTGAACAACATCCCACTGTTTGAGTTCCGACACCGAATCAGAGAGCTCAACCAGATTGACAGAATCAACATCCTGCATGATGTCGTCCTCACCTGCGTCAATGTGGAGACACTTCCATAGGAAGCACACTATTACTCATGCAGTACATGAATCAATACATCGAGGACACAGACATGTATGAGCATGTTGTAAATGCACATGAGCAGAAATGCATACAAAGACAcatataaaaatgtatcagGAAGCTTCAAGATCGAACAAATGTGTTAATACGGGATGTCATATTAATTATGGCATGAGCTGAGCTCATTCTATATGCTACTTCCTCTACCACATAGCTAACATTTAATACATATACAAACATTCCTATTCTCTATGCAGATGCTACTGTATTTGTTGTATACAATAGTTTCTATATTATTAAATTGCTACTAACTGAGAATTATAGATGTGTTAATAttgccataaaaaaaacaatactgtcTATTAGATATCCATTAGGGTTCTGTTAACTGTACTAATtcttaaataaaactatcagtCAAAAATCTG

Function

NR:

description
PREDICTED: galectin-3 isoform X1

GO:

id name namespace
GO:0030246 carbohydrate binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782361.1 False 1710 mRNA 0.49 4 14331235 14335642
XM_039782362.1 True 1745 mRNA 0.50 6 14329618 14335642
XM_039782363.1 False 1326 mRNA 0.55 5 14331235 14335163
XM_039782364.1 False 1667 mRNA 0.49 6 14329618 14335642
XM_039782365.1 False 1631 mRNA 0.50 6 14329618 14335642
XM_039782366.1 False 1580 mRNA 0.49 6 14329618 14335642

Neighbor

gene id symbol gene type direction distance location
lamp5 lamp5 coding upstream 89020 14235279 ~ 14240598 (+)
LOC120546497 NA coding upstream 94627 14232278 ~ 14234991 (+)
LOC120546405 plcb4 coding upstream 100391 14144585 ~ 14229227 (+)
LOC120547093 tpd52l1 coding upstream 339539 13989481 ~ 13990079 (+)
chgb chgb coding upstream 391059 13933833 ~ 13938559 (+)
LOC120546620 NA coding downstream 91922 14427564 ~ 14439516 (+)
evlb LOC102297057 coding downstream 106551 14442193 ~ 14493620 (+)
yy1b LOC101066055,LOC104919809,LOC102203025,LOC101483827,LOC100706360 coding downstream 159127 14494769 ~ 14500520 (+)
LOC120547075 LOC103359908,LOC104919811,LOC101483143,LOC100706096,LOC102294806 coding downstream 193829 14529471 ~ 14537267 (+)
LOC120546629 NA coding downstream 204973 14540615 ~ 14548931 (+)
LOC120547176 NA non-coding upstream 340962 13952385 ~ 13988656 (+)
G184128 NA non-coding upstream 438702 13889301 ~ 13890916 (+)
G184085 fkbp1b,LOC102794993 non-coding upstream 861531 13458602 ~ 13468087 (+)
G184078 mut non-coding upstream 880519 13443043 ~ 13449099 (+)
G184075 NA non-coding upstream 895114 13434212 ~ 13434504 (+)
G184235 NA non-coding downstream 34482 14370124 ~ 14370768 (+)
G184249 LOC101061969 non-coding downstream 140982 14476624 ~ 14565127 (+)
G184263 NA non-coding downstream 222900 14558542 ~ 14606665 (+)
G184339 NA non-coding downstream 319992 14655634 ~ 14656247 (+)
G184341 NA non-coding downstream 324677 14660319 ~ 14660735 (+)
LOC120546742 plcb1 other upstream 188849 14024484 ~ 14140769 (+)
LOC120546706 wdcp other upstream 855459 13468235 ~ 13474159 (+)
G183994 phip other upstream 1082202 13145475 ~ 13247416 (+)
LOC120546167 NA other upstream 1321207 12946999 ~ 13008411 (+)
bcl11bb LOC103368061 other upstream 1590234 12707218 ~ 12739384 (+)
G184231 NA other downstream 26699 14362341 ~ 14381187 (+)
LOC120546619 LOC103359912,LOC102080314 other downstream 57798 14393440 ~ 14424864 (+)
G184258 NA other downstream 189494 14525136 ~ 14529370 (+)
hsp90aa1.1 LOC103369948 other downstream 793834 15129476 ~ 15134860 (+)
LOC120546207 NA other downstream 954032 15289674 ~ 15293252 (+)

Expression


Co-expression Network