LOC120547135 (LOC104964429,LOC103372634)


Basic Information

Item Value
gene id LOC120547135
gene name LOC104964429,LOC103372634
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 18648301 ~ 18654514 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782584.1
TTCCTCCCAGTCAGACAGCTCTCGCGCCAAGAGCAGCGAGCTTCCGCACCGCTCCTTAAAACTGCTGTCAAATAAGGGACACCAGCTAGCGCTATGTTATCGCAATCCAGATGTGCATACCGGACGATTGGTCGCTCTCTGTCAGCGGTGAGCCAGGCCAACAATGTTCTGGTCCGGCAAAATGTATCAGGCCTCCCTGTCTGCAGCCGGCTAGTTTACAGGAAGTCTCAGCCATGTGAATTTCCATCATTAGTGACTATCTCTCACATCAGATTCTTCAAGACATCTGCTGTTCACAGGGATGAGGTTGTCACAGTCAAAACTCCTGCGTTCGCGGAATCGGTTTCAGAGGGCGATGTGAGGTGGGAAAAAGCTGTGGGCGACTCAGTGACAGAAGATGAAGTGGTGTGTGAAATTGAGACTGACAAGACCTCAGTACAAGTCCCCGCTCCAGCAGCTGGCGTGATTGAGGAACTGCTGGTGCCTGATGGAGGGAAGGTAGAATCAGGCATGCCCCTCTTCAAACTCCGGAAAGGAGCGGTTGCTGCCAAAGCTGCCCCCTCCCCAGCTGCAGAGGCCCCGGCTGCAgcccctccacctccaccacctCCCGCTTCAGCCCCCAGTGCCATGCCTCCAGTCCCCCCAGTGCCACCACAAGCTGCCCAAGCCAAACCTGTTTCTGCCATCAAGCCCACAGCTCCAGCTCCAGCACCTCCAACAGCAGGAGGCAGAGGAGAAAGCAGGGTGAAGATGAACCGTATGAGGTTGCGGATCGCCCAGAGGCTAAAGGAGGCTCAGAACACCTGCGCAATGTTGACCACCTTCAACGAAGTGGACATGGGCAATGTTCAGGACATGAGGAAAATCCATAAGGATGCTTTCTTAAAGAAGCACAATATCAAACTGGGTTTTATGTCAGCGTTTGTGAAAGCTGCAGCACACGCTCTGACTGACCAACCTGCCGTCAATGCCGTTATTGATGATACAACCAAAGAGATTGTCTACAGGGATTACGTAGACATTAGCGTCGCTGTGTCAACTCCAAAGGGGCTTGTTGTGCCGGTGATCCGTAATGTTGAGACCATGAACTTTGCTGACATTGAGAAAACCATTAATGCATTGGGAGAAAAGGCTCGTAACAATGAGCTTGCTGTTGAAGATATGGATGGAGGCACCTTCACCATCAGCAACGGCGGCGTGTTCGGCTCCATGTTTGGCACACCTATCATCAACCCCCCCCAGTCCGCCATCCTGGGCATGCATGGAATCTTCGACCGACCTGTGGCCATCAATGGCAAGGTTGAGATCCGGCCCATGATGTATGTGGCACTGACATACGACCACCGACTCGTTGACGGCAGAGAAGCGGTCACTTTCTTGCGCAAGATCAAAGCGGTGGTGGAAGATCCACGAGTGCTGCTTCTGGACATGTGATGTTTCTAGCACCACATTAATCccattttaaagctgcatttgaaagaaaaaaaaaa

Function

NR:

description
PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial-like

GO: NA

KEGG:

id description
K00658 DLST, sucB; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782584.1 True 1493 mRNA 0.52 15 18648301 18654514

Neighbor

gene id symbol gene type direction distance location
LOC120546828 LOC103363571,LOC107377519,LOC101067486,LOC106919680 coding upstream 67178 18500991 ~ 18581123 (+)
flvcr2b LOC104964435,LOC107377514,LOC101468256,LOC103363569,LOC108242486,LOC100710273 coding upstream 206039 18419656 ~ 18442262 (+)
batf batf coding upstream 229141 18414012 ~ 18419160 (+)
zc3h14 zc3h14 coding upstream 239224 18402072 ~ 18409077 (+)
LOC120547097 LOC104922430,LOC103363566,LOC104964450 coding upstream 289388 18347236 ~ 18358913 (+)
fosab LOC104951064,LOC103372631,LOC100709203 coding downstream 41141 18695655 ~ 18698104 (+)
tmed10 tmed10 coding downstream 62509 18717023 ~ 18722986 (+)
eif2b2 eif2b2 coding downstream 78814 18733328 ~ 18737691 (+)
LOC120547336 LOC104951086,LOC103372628 coding downstream 100379 18754893 ~ 18760888 (+)
LOC120546187 acss1,LOC100712210,LOC102211118,LOC102308435,LOC101486165,LOC103364973 coding downstream 106903 18761417 ~ 18779102 (+)
G185415 LOC106525279 non-coding upstream 3147 18643419 ~ 18645154 (+)
G185414 NA non-coding upstream 7920 18636374 ~ 18640381 (+)
LOC120546827 NA non-coding upstream 184273 18443952 ~ 18464028 (+)
G185374 NA non-coding upstream 251130 18396866 ~ 18397171 (+)
G185361 NA non-coding upstream 333822 18314228 ~ 18314479 (+)
LOC120546607 NA non-coding downstream 12126 18666640 ~ 18690033 (+)
G185471 NA non-coding downstream 49451 18703965 ~ 18705234 (+)
G185495 daam1,LOC108240128 non-coding downstream 164570 18819084 ~ 18821146 (+)
G185589 NA non-coding downstream 360212 19014726 ~ 19019533 (+)
G185590 NA non-coding downstream 368182 19022696 ~ 19023030 (+)
ylpm1 ylpm1 other upstream 13249 18598365 ~ 18635052 (+)
znf513a znf513,LOC102795572 other upstream 508041 18127131 ~ 18140260 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other upstream 593375 18020956 ~ 18054926 (+)
G185237 NA other upstream 731053 17916853 ~ 17917248 (+)
LOC120546940 NA other upstream 954667 17674393 ~ 17693634 (+)
LOC120547227 LOC104932566,LOC103364615 other downstream 51342 18705856 ~ 18711994 (+)
LOC120546624 prox1 other downstream 549640 19204154 ~ 19237033 (+)
acbd3 acbd3,LOC102799892 other downstream 700102 19354616 ~ 19427489 (+)
si:dkey-206f10.1 LOC103360989,LOC103380838 other downstream 713206 19367720 ~ 19389223 (+)
nhsl1b nhsl1,LOC101470763 other downstream 775081 19429595 ~ 19541832 (+)

Expression


Co-expression Network