dynlt1b (dynlt1)


Basic Information

Item Value
gene id dynlt1b
gene name dynlt1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 21177476 ~ 21178916 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782588.1
TTATTCTGAAGAAAAACGACCGGAAGTCTTATTCCAGGGTAACTTTCCCATCGGAGGCTAAGATCTATGGGAGGCAGTAGCAATGGACGAGTATCAGACAGAAGAGGAGACTGCGTTTGTCGTTGAAGAAGTGAGCAAAATCATAAAAGAGTCAGTAGAAGCAGCCATAGGAGGAAATGCCTACCAGCACAGCAGAGTTAACCAGTGGAGCACCAGTGTAGTGGAGCAGTGCCTCAGTCAACTCAGCAAGCTGGGAAAGCCTTTCAAATATATTGTAACGTGTATCATCATGCAGAAAAATGGAGCAGGTCTGCAAACAGCCAGCACATGCTTCTGGGACAACTCAAGTGATGGAAGCTGTGCCGTGAGATGGGAGAACAAGTCCATGTACTGTATCGTCAATGTTTTTGGACTGGCCCTCTGAACCAACTACAATGTACCTGAAGTGTTTGCAATATTTTGGATTTTGTGTATTTTCCAGAACCAGCATGTTATGTTTGGTCATGGTGTCTATATTTGAATACATATTGTTTTTATAGTAAGTGcaattaattaaaacaatacTGTGCTTTA

Function

symbol description
dynlt1 Enables identical protein binding activity. Involved in intracellular transport of viral protein in host cell. Located in cytoplasmic microtubule and secretory vesicle. Part of cytoplasmic dynein complex.

NR:

description
PREDICTED: dynein light chain Tctex-type 1

GO: NA

KEGG:

id description
K10420 DYNLT; dynein light chain Tctex-type 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782588.1 True 573 mRNA 0.42 5 21177476 21178916

Neighbor

gene id symbol gene type direction distance location
serac1 serac1,LOC102777075 coding upstream 7115 21163218 ~ 21170361 (+)
myct1a myct1,LOC103355010 coding upstream 14590 21159956 ~ 21162886 (+)
esr1 esr1 coding upstream 165240 20999574 ~ 21012236 (+)
armt1 armt1 coding upstream 180851 20992466 ~ 20996625 (+)
akap12b akap12,LOC102289546,LOC102211499,LOC102799877 coding upstream 197313 20937518 ~ 20980163 (+)
mrps10 mrps10 coding downstream 45635 21224551 ~ 21226805 (+)
ppil6 ppil6 coding downstream 68747 21247663 ~ 21251189 (+)
cd164 NA coding downstream 73064 21251980 ~ 21266573 (+)
sesn1 sesn1,LOC102782344 coding downstream 95941 21274857 ~ 21323086 (+)
snx3 snx3 coding downstream 278645 21457561 ~ 21474022 (+)
LOC120546175 NA non-coding upstream 24292 21151444 ~ 21153184 (+)
G186106 NA non-coding upstream 115500 21060757 ~ 21061976 (+)
G186094 syne1,LOC103355013,LOC106946714 non-coding upstream 144294 21032641 ~ 21033182 (+)
G186088 LOC103355013 non-coding upstream 153598 21019821 ~ 21023878 (+)
LOC120546176 NA non-coding upstream 186058 20989305 ~ 20991418 (+)
G186210 NA non-coding downstream 169028 21347944 ~ 21348581 (+)
G186220 NA non-coding downstream 295636 21474552 ~ 21475304 (+)
G186297 NA non-coding downstream 361672 21540588 ~ 21542781 (+)
LOC120546760 NA non-coding downstream 566665 21745581 ~ 21746554 (+)
LOC120547080 NA non-coding downstream 654032 21832948 ~ 21833782 (+)
gtf2h5 gtf2h5 other upstream 4837 21170948 ~ 21172639 (+)
kif25 LOC104961976,LOC100703631 other upstream 1317259 19852643 ~ 19860217 (+)
acp1 acp1 other upstream 1529320 19633500 ~ 19648156 (+)
zgc:193593 NA other upstream 1556693 19572573 ~ 19620783 (+)
nhsl1b nhsl1,LOC101470763 other upstream 1635644 19429595 ~ 19541832 (+)
erh erh,LOC100699790,LOC101174968 other downstream 765827 21944743 ~ 21947000 (+)
G186394 mycn,LOC108233328 other downstream 806863 21985779 ~ 22065589 (+)
lin28b lin28b other downstream 1102051 22280967 ~ 22301585 (+)
kcns3b kcns3,LOC103372653 other downstream 1628963 22807879 ~ 22810520 (+)
si:ch211-22i13.2 NA other downstream 1783117 22962033 ~ 22966010 (+)

Expression


Co-expression Network