pgm3 (pgm3)


Basic Information

Item Value
gene id pgm3
gene name pgm3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 16518444 ~ 16523666 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782672.1
ACGTCGTCAGTGGGAAGCATACGGAAGCATATTATCAAAGAATTTCCGGCTTTGATATTTTATAAGGTGGGAAGAAGAAACCAGGAAGCGTTTCATGACAACACTTCACTTCTAAACATCCAGAAAACAAACCATTATGTCCCAGTTTAAGGAAGTATCAAAGCAGTCTAGTCTGCACCCCAAACCGGCAGGGTTGGTTTTGCAGTATGGTACCGCTGGTTTCAGGACCAATGCCAAAAAGCTGGACCACCTCATGTTTAGGATGGGACTGCTGGCCACTCTCCGCTCCAAAAAGACCAAAGCCACCATTGGAGTCATGGTCACCGCATCACACAACCCTGAGGAGGACAACGGGTTGAAGCTGGTTGACCCCATGGGAGAGATGGTGACGCCGACATGGGAGGTCTACGCCACCCAGCTGGCCAATGCTGAGCAGGAAGATTTGCTCGCTGCTCTGCAGGACATTATAGAGAAGGAGGCCATAAACATGAGCCAGGAAGCTAATGTGTTTGTGGGCAAAGACACCAGGAGCAGCAGTGCCAGCCTTTCACAGGCAGTACTGGATGGAGTATCTGCACTCGGTGGTCACAGCAAAGACTATGGTTTGGTGACCACCCCACAGCTCCACTACATGGTTTGCTGTCAGAACACACAGTGTAAATACGGAGAAGCCACAGTGGAAGGATACTATAAGAAACTCTGCCAAGCTTTCATTCAGCTCACGAAAAATGCATCCAATTGTACAGACGACCAGAAGCACCTCACTGTGGACGGCGCTAATGGTATAGGGGCCCTAAAGTTGCGTGAGATGGAGAGTCACCTGAAGGGGGAGCTGCATATATCGCTGTTCAACGATGGCAGTAAAGGAAAGCTCAACCACCAGTGTGGGGCTGACTTTGTCAAAGTGCAGCAAAAACCTCCAACAGGCATTAAGATGAACCCAGGAGAGCGTTGCTGTTCCTTTGATGGTGATGCTGACCGAATAGTTTACCACTACGCTGACTCCGAAGGACAATTTCACCTGCTGGATGGAGACAAAATTGCTACTCTCATCAGCATTTTCCTTAAAGAGCTGCTCGCACAGGCTGGTCTGGACTTGGAGATAGCAGTGGTGCAAACTGCTTATGCTAATGGAAGCTCAACAAACTATTTGGAAGACACATTGAAGGTGATAGTGAGGTGTTCTAAAACTGGAGTGAAGCACCTTCATCACGCAGCCCAGGAGTTTGATATTGGTGTGTACTTCGAGTCCAATGGTCATGGAACTGTGTTGTTCAGTAAAGCAGCTGAAGAGAAGATCCAGCAGCTAGCTGAGAACTCCACCATCAATGACGAGAGGAAGAGAGCAGCTCTCCTGCTGCAGAACACTGTCAACGTCATCaaccagACTGTAGGTGATGCCATTTCTGACATGCTGCTGATCGAAGCCATATTAGCCATCAAGGGTATGACTATCCAGCAGTGGGACGCCCTCTACAGTGACCTGCCAAACAGGCAGCTCAAAGTCAAGGTGTCGGACCGCAGGATGATAGACACCACAGACGCAGAGAGACGGGCAGTGAGCCCAGCAGGACTGCAGGAGGCCATCAACACTTTAGTGAAGAATTACAGAGAGGCTCGCTCCTTTGTGAGACCCTCCGGCACCGAGGATCTGGTGAGAGTTTACGCCGAGGCAGAAACACAGgaGAGTGCTGATGCCCTGGCACATGACGTCAGTCTTGTGGTTTATCGTCTCGCTGGGGGAGTGGGGGGTGAACCCAAACCATTGCActagaaacacatacacacacaatcatacaaCATCGACTAATCATTAGGTGCTTTTTGAATGCAATTTCAGTTGACAGCATCTTTCTCTAAAGTTGTATTTTGTCAAAATTGCTTCATTTCAGTGAGGTGCCAAATTATTTTGTACTGTTAATTGCACTCTAGTTCTCTATTTCTTTGTATTTGTCATCATTGTGAATATATGGGATGCACTGGGGGGGGGCAATGAATGGACTTTATGCTACTTTACTCATGGCCAGTTATTATATCTCTATCAGGCTGCCAAAATTAATGGGTTAATTAATGTAAATTATGAGTTTCTGTGTAATATAAACTTGATACATAAACTGTATATATGCCATAATTAAAACATCAATTGTATTCTCACACAAATTAAGAAGGTTTTCAATTAACTTTCAGTTATCTTGTATCTTCCTACTAAATGGAATCTTTTTGACCGGTTACTGTAGGTAATTTCTTTGCTTTATGAGTGACATCCCAAGTTTACATGAGGGGTGTTGTAATAATTGTTCTTCCCTTGAATGTCCGTTGGAAAGCCTTTGCTGCTTTGGTTTTAATAAATCGTGGAAAATA

Function

symbol description
pgm3 Predicted to enable phosphoacetylglucosamine mutase activity. Predicted to be involved in UDP-N-acetylglucosamine biosynthetic process and hemopoiesis. Predicted to act upstream of or within carbohydrate metabolic process. Is expressed in blood; intermediate cell mass of mesoderm; and notochord. Human ortholog(s) of this gene implicated in immunodeficiency 23 and teratoma. Orthologous to human PGM3 (phosphoglucomutase 3).

NR:

description
phosphoacetylglucosamine mutase

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0004610 phosphoacetylglucosamine mutase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K01836 PGM3; phosphoacetylglucosamine mutase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782672.1 True 2361 mRNA 0.46 13 16518444 16523666

Neighbor

gene id symbol gene type direction distance location
LOC120546559 LOC102791590 coding upstream 27805 16487014 ~ 16490639 (+)
LOC120547268 rnf146 coding upstream 127814 16387758 ~ 16390630 (+)
LOC120547267 NA coding upstream 131666 16384271 ~ 16386778 (+)
tpd52l1 tpd52l1 coding upstream 143230 16357559 ~ 16375214 (+)
rnf217 rnf217,LOC106571519 coding upstream 165789 16340938 ~ 16352655 (+)
ccnc ccnc coding downstream 4323 16527989 ~ 16534031 (+)
faxca LOC104925628,LOC104963907,LOC103380784,LOC102789719,LOC101473580,LOC102289837 coding downstream 12645 16536311 ~ 16544495 (+)
tmem63a LOC104944870 coding downstream 65184 16588850 ~ 16599462 (+)
rsph9 rsph9 coding downstream 81720 16605386 ~ 16609726 (+)
LOC120546775 adcy3,LOC102197140,LOC101471325 coding downstream 206397 16730063 ~ 16744830 (+)
LOC120546561 NA non-coding upstream 2111 16493194 ~ 16516333 (+)
G184633 LOC101069623,LOC100711363,LOC102312356,LOC101478077,LOC102202636 non-coding upstream 104943 16411676 ~ 16413501 (+)
G184618 NA non-coding upstream 161896 16291211 ~ 16356548 (+)
G184584 NA non-coding upstream 470763 16045809 ~ 16047681 (+)
G184540 NA non-coding upstream 590782 15926071 ~ 15927662 (+)
G184796 NA non-coding downstream 72274 16595940 ~ 16610380 (+)
G184851 naga,LOC104944830 non-coding downstream 201211 16724877 ~ 16726392 (+)
G184948 NA non-coding downstream 410030 16933696 ~ 16956864 (+)
G184995 NA non-coding downstream 757449 17281115 ~ 17299420 (+)
G185022 NA non-coding downstream 869868 17393534 ~ 17397048 (+)
G184628 LOC104949332,LOC106633454,LOC101477798,LOC102792991 other upstream 114367 16399438 ~ 16404077 (+)
nkain2 nkain2 other upstream 126593 16248094 ~ 16391851 (+)
cenpw NA other upstream 136588 16379479 ~ 16381856 (+)
LOC120546249 NA other upstream 550321 15914586 ~ 15968123 (+)
dpf3 LOC100693327,LOC101467145,LOC103380755,LOC104966071,LOC102779461 other upstream 798812 15694944 ~ 15719632 (+)
vegfab vegfa other downstream 147920 16671586 ~ 16686079 (+)
si:ch211-57i17.1 LOC103363786 other downstream 241879 16765545 ~ 16779935 (+)
G184859 NA other downstream 302028 16825694 ~ 16833314 (+)
G184996 sec63 other downstream 769988 17293654 ~ 17295701 (+)
map7b map7,LOC107374525 other downstream 818171 17341837 ~ 17375059 (+)

Expression


Co-expression Network