Gene
RNA
| Item | Value |
|---|---|
| gene id | irak1bp1 |
| gene name | NA |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 13139981 ~ 13141521 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| description |
|---|
| interleukin-1 receptor-associated kinase 1-binding protein 1 |
| id | name | namespace |
|---|---|---|
| GO:0090304 | nucleic acid metabolic process | biological_process |
| GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
| GO:0006725 | cellular aromatic compound metabolic process | biological_process |
| GO:1901360 | organic cyclic compound metabolic process | biological_process |
| GO:0009987 | cellular process | biological_process |
| GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
| GO:0046483 | heterocycle metabolic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039782720.1 | True | 929 | mRNA | 0.53 | 4 | 13139981 | 13141521 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tbx18 | tbx18 | coding | upstream | 73394 | 13056433 ~ 13066587 (+) |
| selenoi | selenoi | coding | upstream | 217425 | 12908967 ~ 12922556 (+) |
| agbl5 | agbl5 | coding | upstream | 232676 | 12889261 ~ 12907305 (+) |
| ccdc85cb | ccdc85c | coding | upstream | 449181 | 12640656 ~ 12690800 (+) |
| LOC120546362 | NA | coding | upstream | 501456 | 12632013 ~ 12638525 (+) |
| enpp5 | enpp5 | coding | downstream | 79585 | 13221106 ~ 13228478 (+) |
| clic5b | clic5,LOC104958973,LOC107378135,LOC106964163,LOC103355727 | coding | downstream | 88445 | 13229966 ~ 13249155 (+) |
| opn8a | NA | coding | downstream | 247294 | 13388815 ~ 13412812 (+) |
| opn8b | NA | coding | downstream | 279787 | 13421308 ~ 13431771 (+) |
| atad2b | atad2b | coding | downstream | 361123 | 13502644 ~ 13577416 (+) |
| G183933 | NA | non-coding | upstream | 392314 | 12746084 ~ 12747667 (+) |
| G183896 | ccnk | non-coding | upstream | 436739 | 12701168 ~ 12703242 (+) |
| G183891 | NA | non-coding | upstream | 499903 | 12639318 ~ 12640078 (+) |
| G183890 | NA | non-coding | upstream | 502445 | 12629289 ~ 12637536 (+) |
| G183868 | NA | non-coding | upstream | 634858 | 12504685 ~ 12505123 (+) |
| G184000 | phip | non-coding | downstream | 29401 | 13170922 ~ 13172244 (+) |
| G184071 | NA | non-coding | downstream | 273719 | 13415240 ~ 13415570 (+) |
| G184074 | NA | non-coding | downstream | 292464 | 13433985 ~ 13434206 (+) |
| G184075 | NA | non-coding | downstream | 292691 | 13434212 ~ 13434504 (+) |
| G184078 | mut | non-coding | downstream | 301522 | 13443043 ~ 13449099 (+) |
| LOC120546167 | NA | other | upstream | 131570 | 12946999 ~ 13008411 (+) |
| bcl11bb | LOC103368061 | other | upstream | 400597 | 12707218 ~ 12739384 (+) |
| ches1 | foxn3 | other | upstream | 1270789 | 11764143 ~ 11869192 (+) |
| G183540 | sf3b6,pm14,SF3B6 | other | upstream | 2473509 | 10622736 ~ 10666472 (+) |
| cdc42bpab | fzd3,LOC103374788 | other | upstream | 2740169 | 10236949 ~ 10399812 (+) |
| G183994 | phip | other | downstream | 3954 | 13145475 ~ 13247416 (+) |
| LOC120546706 | wdcp | other | downstream | 326714 | 13468235 ~ 13474159 (+) |
| LOC120546742 | plcb1 | other | downstream | 882963 | 14024484 ~ 14140769 (+) |
| G184231 | NA | other | downstream | 1220820 | 14362341 ~ 14381187 (+) |
| LOC120546619 | LOC103359912,LOC102080314 | other | downstream | 1251919 | 14393440 ~ 14424864 (+) |
