LOC120547332 (LOC103374244,LOC103457752,LOC100712349,LOC103148799)


Basic Information

Item Value
gene id LOC120547332
gene name LOC103374244,LOC103457752,LOC100712349,LOC103148799
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 8917513 ~ 8931493 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782894.1
CCAGCTGTTGTCTTCATGGACATGTTCACACTAGCAAAAGAGAACTGGTTTGTGTCTGGATAACGACATGGGCTCTGGAGACAGTTGGAGGAAAATTGCTGCGCTTATTGGAGTCTTTGTGGTTTTGAAGGTGCAAGCTCTTCCAACACATATCGGTGATAATGCAGATACTGGTGAACTGAGTGACGACATACTTGACATCAATAGAGGGTTAACACACCTGTTTGAGGGAGACATCGCTGTTGATCCCAGCAGGAATGCAATCCTTGATCAAACAAGAAGATGGAAGTTCCCCATTCCCTATATCTTAACTGATTCTTTAGAACTGAATGCTAAAGGTGTGATCCTCCAGGCTTTTGAGGAATACCGTTTGAGATCCTGTGTGGACTTCAAGCCCTATGAGGGCGAGAGCAGCTACATCTCCTTCACCAAGCTGTCTGGATGCTGGTCATATGTTGGAGATGATAGAACAGGCCAGAATGTGTCCATTGGAGCCAGATGTGACACTAAGGCTATTGTGCAGCATGAGCTCCTCCATGCTCTGGGCTTTTACCATGAACAGTCTCGCTCAGATAGAGACGACTATGTCAAAATCTGGTGGGACCAGATTGAAGAAGGGAAGGACCACAATTTCGAGAAGTATGAGGATGAATTTATCACTGATCTGAACACGCCATATGACTATGAGTCCATCATGCACTACAGACCACTGTCCTTTAACAAGAACGAAAGCATCCCCACAATCACCACCACCATACCGTATTTTAATGAGGTCATCGGCCAGCGGCTGGACTTCAGTGCAGTAGACATCACAAGGCTCAACCGCATGTACGACTGTGccaacacacacactctcctggACCAGTGCTCCTTTGAGCTGATCAACATCTGTGGAATGATCCAGAATGAGGAGGACACCGCAGACTGGGCCCAGACGCTGAGCAGTCCAGCTGATACCGACCACACCCTGGCAGGGCGCTGCAGAGATTCTGGCTACTTCATGAAGTTTGACACATCTTCGGGTGCAGCTGGAAGCAGCGCCTTGCTGGAGTCACGTATCCTCTACCCCAAGAGAGACGAGCAGTGCCTGGAGTTCTTCTACAAGATGACGGGAGCCGCTGGGGACAAACTGGTCATATGGGTCAGGACTGATGATGGGACAGGGGCTCTACGCAGTTTCAAGAAGATCCACACCATTAcagGTAATGGAGATGCTGCCTGGAAAATAGCCCATGTAACTCTCAAGGTGACAGAGAAGTTCCGCTATTCCTTCCAAGGCATCAGAGGATCAGCCGACTCCTCGGGCACCATCTTAATCGATGACATCACTCTTACTGAGACCATTTGCCCCAGTGCTGTCTGGCAAATCCACAACTTCACCAATGTTCTCGCCACCACTCCTAATGGCAGTGCAGTTAAAAGCAAGTGCTTCTACAACTCGGAGGGCTACTCATTCGGTGTCAGTGTTTACCCAAATGGAAAAGACAGCGCCTACCCAGACTATGTTGGTATGAACTTGCACCTCTGCAGTGGGGAAAACGATGCAGTGATGCAATGGCCCGCCGAAAACAGGCAGGCAACCATTGTTGCCATGGACCAGGACCCTGATGTAAAACTGAGAATGTCTTCTACAAGAAGCTTCACTACAGACACTGACGCCCGCTGGAACAAACCAACAGCGGCTTCGGGAGCGGTGTGGGATGACAGCTGCCAGTGCCACCGCGGTAAAGACTTCGGCTGGAGCACATTCATTTCTCACAAGCAATTGCACAGGAGGAGTTTCCTCAAGAACGATGACCTCATCATCACCGCTGAATTTAATGATTTGACCCACCTGATCGAGACTGAGGTGCCTGTCGACCCGGCCACACAAAGTAATGACATCACAGATGAGAAGCCAATCAGCGAGGTGAAAATGAGACCGGAGGCTCCAAAACACAGAGAAGCACGTGCTGCCAACCCTTGTCATCCCAACCCTTGTTTTAACGGAGgcgtgtgtgtggaaagtgaaGGGAAAGCCTCATGCagGTGTGCATCAAGCCAGGCCACCTACTACGCTGGTAAGAGGTGTGAGAAACTGAACATAGACCaaggcattctgggagcgcTGATTGGCGGCGCAGCAGGAATCGTAGTCCTGACACTGGCCATCTTCAGCGTCATCAGGAGAGCTCAGTGAAACACATTTCCGAGAAATATGTGAATATGTGTCTTCTGTATTCATTCAGCAGTGAAAGCACAGCATACAGTGCCAACACTGGAGAGAGAAGTATAAGTATCAGTTTATAGGCTCATTTATGGACACTAAAACCATGGGCTTATATCTGGTGTGCGCCcacatgaaataattaaatgttttcCTCCTTAGACTATGGCTAGAAATCAAGCCCCAACAACTTAAGCAAAAATTTCAACTgtcaaatttaaacattttgcagGACAACAGCAGTTTTGTTTCTTaagtttgtttgatgtgtataATAAAGATAATCCTATTTAGTTCACTAAAAGTTATGAAAAATGTATAGTCATGCATAATGTAATGaacaataaaagacattatattcattta

Function

NR:

description
PREDICTED: meprin A subunit alpha-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0016020 membrane cellular_component
GO:0004222 metalloendopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K01395 MEP1A; meprin A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782894.1 True 2572 mRNA 0.47 14 8917513 8931493

Neighbor

gene id symbol gene type direction distance location
LOC120546398 NA coding downstream 126812 8789832 ~ 8790701 (-)
LOC120546396 NA coding downstream 148489 8767999 ~ 8769024 (-)
LOC120546393 NA coding downstream 177174 8723103 ~ 8740339 (-)
LOC120546390 NA coding downstream 201079 8715565 ~ 8716434 (-)
LOC120546389 NA coding downstream 240828 8675816 ~ 8676685 (-)
mep1a.1 LOC103374245,LOC100712081,LOC105920587 coding upstream 4431 8935924 ~ 8950403 (-)
LOC120546235 LOC107100257 coding upstream 30187 8961680 ~ 8991368 (-)
LOC120546203 NA coding upstream 67399 8998892 ~ 9000320 (-)
brox brox,LOC102780098 coding upstream 71776 9003269 ~ 9020428 (-)
disp1 disp1 coding upstream 223531 9155024 ~ 9288203 (-)
G183068 NA non-coding downstream 145928 8771288 ~ 8771585 (-)
G183042 NA non-coding downstream 438167 8478912 ~ 8479346 (-)
G183027 NA non-coding downstream 485839 8431362 ~ 8431674 (-)
G183013 NA non-coding downstream 671748 8245565 ~ 8245765 (-)
G183006 NA non-coding downstream 726039 8191178 ~ 8191474 (-)
G183136 NA non-coding upstream 67082 8998575 ~ 8998828 (-)
LOC120546288 NA non-coding upstream 166878 9098371 ~ 9099326 (-)
G183175 NA non-coding upstream 195228 9126721 ~ 9129230 (-)
G183177 NA non-coding upstream 202043 9133536 ~ 9134536 (-)
G183178 NA non-coding upstream 203052 9134545 ~ 9134808 (-)
LOC120546397 NA other downstream 130295 8781328 ~ 8787218 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other downstream 790849 8049458 ~ 8126664 (-)
G182977 NA other downstream 892469 8024715 ~ 8025044 (-)
G182952 NA other downstream 1151127 7761565 ~ 7766386 (-)
G182764 NA other downstream 2216396 6700491 ~ 6701117 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other upstream 89467 9020960 ~ 9024565 (-)
G183176 NA other upstream 198080 9129573 ~ 9133472 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other upstream 1167985 10099478 ~ 10101061 (-)
LOC120546776 NA other upstream 1523751 10455244 ~ 10610625 (-)
G183528 NA other upstream 1589224 10520717 ~ 10521410 (-)

Expression


Co-expression Network