Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120546509 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 19950611 ~ 19973343 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005636880.1 | True | 353 | lncRNA | 0.53 | 4 | 19950611 | 19973343 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cdc40 | cdc40,LOC103135076 | coding | upstream | 6580 | 19919473 ~ 19944031 (+) |
| LOC120546286 | gpr6,LOC104945012 | coding | upstream | 113213 | 19834485 ~ 19837398 (+) |
| fig4a | fig4,LOC102794534 | coding | upstream | 119768 | 19745177 ~ 19830843 (+) |
| si:dkey-119f1.1 | smc6 | coding | upstream | 219387 | 19712664 ~ 19731224 (+) |
| LOC120546417 | NA | coding | upstream | 247220 | 19699722 ~ 19703391 (+) |
| slc22a16 | slc22a16 | coding | downstream | 4521 | 19977864 ~ 19992886 (+) |
| LOC120546927 | LOC104961664 | coding | downstream | 643907 | 20617250 ~ 20622631 (+) |
| epm2a | epm2a | coding | downstream | 655498 | 20628841 ~ 20638714 (+) |
| LOC120547338 | NA | coding | downstream | 905137 | 20878480 ~ 20881587 (+) |
| mthfd1l | mthfd1l | coding | downstream | 918065 | 20891408 ~ 20928761 (+) |
| G185827 | NA | non-coding | upstream | 98900 | 19850174 ~ 19851711 (+) |
| G185804 | NA | non-coding | upstream | 211321 | 19739040 ~ 19739290 (+) |
| G185802 | NA | non-coding | upstream | 212347 | 19737994 ~ 19738264 (+) |
| G185800 | ak9 | non-coding | upstream | 214555 | 19735840 ~ 19736056 (+) |
| G185799 | NA | non-coding | upstream | 214887 | 19735518 ~ 19735724 (+) |
| LOC120546242 | NA | non-coding | downstream | 288442 | 20261785 ~ 20359609 (+) |
| LOC120546929 | NA | non-coding | downstream | 653205 | 20626548 ~ 20628265 (+) |
| G186025 | NA | non-coding | downstream | 719827 | 20693170 ~ 20702644 (+) |
| G186035 | utrn | non-coding | downstream | 772974 | 20746317 ~ 20758806 (+) |
| LOC120546176 | NA | non-coding | downstream | 1015962 | 20989305 ~ 20991418 (+) |
| kif25 | LOC104961976,LOC100703631 | other | upstream | 90394 | 19852643 ~ 19860217 (+) |
| acp1 | acp1 | other | upstream | 302455 | 19633500 ~ 19648156 (+) |
| zgc:193593 | NA | other | upstream | 329828 | 19572573 ~ 19620783 (+) |
| nhsl1b | nhsl1,LOC101470763 | other | upstream | 408779 | 19429595 ~ 19541832 (+) |
| si:dkey-206f10.1 | LOC103360989,LOC103380838 | other | upstream | 561388 | 19367720 ~ 19389223 (+) |
| gtf2h5 | gtf2h5 | other | downstream | 1197605 | 21170948 ~ 21172639 (+) |
| erh | erh,LOC100699790,LOC101174968 | other | downstream | 1971400 | 21944743 ~ 21947000 (+) |
| G186394 | mycn,LOC108233328 | other | downstream | 2012436 | 21985779 ~ 22065589 (+) |
| lin28b | lin28b | other | downstream | 2307624 | 22280967 ~ 22301585 (+) |
| kcns3b | kcns3,LOC103372653 | other | downstream | 2834536 | 22807879 ~ 22810520 (+) |
