LOC120546896


Basic Information

Item Value
gene id LOC120546896
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 30499354 ~ 30501244 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636983.1
TAGGAGGCTGCCATTATTCACTCAGTAAGATAAAAAAGAACGCCagttagtgaaataaatcaattctacatactaaatactatctaatactggctatACCTTGTTGTAAAGAGAGCAAAAGAGAGCTGTGCCTGAATCAGCTATCGTCACGGAGTTATAGGATGTAAAATGAGTgaaagagagctgtgcctgAATCAACTATCGTCACGGAGTTATAGGCAGCAAAATGgtggaggaggtgaaaagGCTACGCAGGGGAGGCCCAGTCCACAGAGGGATATTGAATCACATCGATTCTTCACATCCCAGAGACTTCCAGGgtttagagattcccagttcaggaTCGAGACTCTGAACGTAGACAGATTTCCCTTGATTCATTCTTCATGGTGGAAGGACAAacggaaaccaaactcat

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636983.1 True 418 lncRNA 0.43 3 30499354 30501244

Neighbor

gene id symbol gene type direction distance location
trnat-ugu_4 NA coding upstream 125616 30373666 ~ 30373738 (+)
galnt14 galnt14,LOC103365833,LOC102790467 coding upstream 176010 30125463 ~ 30323344 (+)
zfand3 zfand3,LOC104930467,LOC103365830,LOC101473384,LOC100698322,LOC106531772 coding upstream 383549 30099959 ~ 30115805 (+)
LOC120546869 NA coding upstream 416291 30028950 ~ 30083063 (+)
LOC120546436 NA coding upstream 476712 30012155 ~ 30022642 (+)
LOC120546909 NA coding downstream 168512 30669756 ~ 30673973 (+)
LOC120546901 NA coding downstream 313609 30814853 ~ 30821281 (+)
LOC120546904 NA coding downstream 325515 30826759 ~ 30830636 (+)
LOC120546903 NA coding downstream 336487 30837731 ~ 30850277 (+)
LOC120546902 NA coding downstream 343811 30845055 ~ 30850277 (+)
G188367 NA non-coding upstream 63557 30411623 ~ 30435797 (+)
G188365 NA non-coding upstream 68862 30401721 ~ 30430492 (+)
G188363 NA non-coding upstream 100404 30393182 ~ 30398950 (+)
G188355 NA non-coding upstream 144717 30348075 ~ 30354637 (+)
G188347 NA non-coding upstream 380313 30116710 ~ 30119041 (+)
LOC120546922 NA non-coding downstream 134170 30635414 ~ 30638071 (+)
G188353 NA non-coding downstream 282374 30783618 ~ 30813785 (+)
G188421 NA non-coding downstream 519337 31020581 ~ 31020954 (+)
LOC120546487 NA non-coding downstream 582227 31083471 ~ 31086840 (+)
G188430 NA non-coding downstream 586566 31087810 ~ 31093393 (+)
angel2 NA other upstream 163152 30324972 ~ 30336202 (+)
btbd9 btbd9 other upstream 402115 30084548 ~ 30097239 (+)
G188296 LOC107662224,LOC107746645,LOC107750038,LOC107712283,LOC107663761 other upstream 853531 29645254 ~ 29645823 (+)
G188268 fabp7,LOC105924611,LOC105419070,LOC101079341,LOC102793361,LOC107727581 other upstream 1035480 29461849 ~ 29463874 (+)
G188207 clvs2,LOC107675107 other upstream 1078627 29419376 ~ 29420727 (+)
G188352 NA other downstream 110437 30611681 ~ 30882446 (+)
LOC120546905 NA other downstream 292975 30794219 ~ 30812452 (+)
hivep2a LOC103373864 other downstream 667823 31169067 ~ 31309396 (+)
LOC120546816 NA other downstream 1104810 31606054 ~ 31614522 (+)
LOC120546196 LOC105017826 other downstream 1275719 31776963 ~ 31782066 (+)

Expression


Co-expression Network