LOC120546929


Basic Information

Item Value
gene id LOC120546929
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 20626548 ~ 20628265 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636997.1
GGTTTCCAGCAGGCTTTCATACTGTTGAGGAAGTAATCAAGTTCATCACCCTGGTGATCTTCACAGTGACAGCTCAACATGCTGCAGTAAACAGTGGGCAGTTTGACTACTACTCCTGGGTGCCCAATGGCTCACTCCTGCTGCACAAACCTCCAACCACTAAGGGGCAGTAAAGCATGAACACCATTTTGGAGACCCTCCCAGATGTTGGGGACACAGTCAGCTTTGTCGGAATGGCTCGCCTGCTTTCAGAGACATACACAGATGCTGTTTCGATGGGTACATACCCCGAAGAACGATTCGATGAGCCTGCCCCTAAGCAGATGATTAAGGAATTTCAAGCAGAGTTGTCTTACCTCAGTGAAGAAATTGCAACAGGAAACTTACAGCTTGAAGTACCCTACACATATCTGAACCCTGCTGAGATAGAGAACAGTGTAGCTATTTAGGAGAGTCTGAGGGAGCCATTCTGCATGAGATGATTATATCCATGCATTTCTTAACACCTGTCTTGCAGGCTGGGAGGTGTGTTATACTTTGCATTTATTGATACAATAGGTGGTAGAGACAGTTTAGTGAGGTGCTGCATGCTGGGACAAGAGGACTATATTTTGGTTGTGCCCATATAATGGTGACATATAGACCTACAGTACTATGTTGAGCAGAAACTTAACTGATTAACACAGGCCACTAGTACCAATTGGGCTTTTGCCCAAAACAGCTAAATAATTGTGAAAGTGAATGGTTttatatttaaagttttttgCATTTATGTACATTTCTGCTTTGATGTTGTTGTTTCAGACTTCTACAAGTGCATAAaattcatatttatatataaatccaCAAAGCAGGAACACTCAAGTTCTGTATCAGCAATATAACTCCGGGTTTTATCTGTACTGTTTCTTTCCTGTAACGCAT

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen molecular_function
GO:0005506 iron ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636997.1 True 924 lncRNA 0.42 3 20626548 20628265

Neighbor

gene id symbol gene type direction distance location
LOC120546927 LOC104961664 coding upstream 3917 20617250 ~ 20622631 (+)
slc22a16 slc22a16 coding upstream 633662 19977864 ~ 19992886 (+)
cdc40 cdc40,LOC103135076 coding upstream 682517 19919473 ~ 19944031 (+)
LOC120546286 gpr6,LOC104945012 coding upstream 789150 19834485 ~ 19837398 (+)
fig4a fig4,LOC102794534 coding upstream 795705 19745177 ~ 19830843 (+)
epm2a epm2a coding downstream 576 20628841 ~ 20638714 (+)
LOC120547338 NA coding downstream 250215 20878480 ~ 20881587 (+)
mthfd1l mthfd1l coding downstream 263143 20891408 ~ 20928761 (+)
akap12b akap12,LOC102289546,LOC102211499,LOC102799877 coding downstream 309253 20937518 ~ 20980163 (+)
armt1 armt1 coding downstream 364201 20992466 ~ 20996625 (+)
LOC120546242 NA non-coding upstream 266939 20261785 ~ 20359609 (+)
G185869 mettl24 non-coding upstream 646458 19945093 ~ 19980090 (+)
LOC120546509 NA non-coding upstream 653205 19950611 ~ 19973343 (+)
G185827 NA non-coding upstream 774837 19850174 ~ 19851711 (+)
G185804 NA non-coding upstream 887258 19739040 ~ 19739290 (+)
G186025 NA non-coding downstream 64905 20693170 ~ 20702644 (+)
G186035 utrn non-coding downstream 118052 20746317 ~ 20758806 (+)
LOC120546176 NA non-coding downstream 361040 20989305 ~ 20991418 (+)
G186088 LOC103355013 non-coding downstream 391556 21019821 ~ 21023878 (+)
G186094 syne1,LOC103355013,LOC106946714 non-coding downstream 404376 21032641 ~ 21033182 (+)
kif25 LOC104961976,LOC100703631 other upstream 766331 19852643 ~ 19860217 (+)
acp1 acp1 other upstream 978392 19633500 ~ 19648156 (+)
zgc:193593 NA other upstream 1005765 19572573 ~ 19620783 (+)
nhsl1b nhsl1,LOC101470763 other upstream 1084716 19429595 ~ 19541832 (+)
si:dkey-206f10.1 LOC103360989,LOC103380838 other upstream 1237325 19367720 ~ 19389223 (+)
gtf2h5 gtf2h5 other downstream 542683 21170948 ~ 21172639 (+)
erh erh,LOC100699790,LOC101174968 other downstream 1316478 21944743 ~ 21947000 (+)
G186394 mycn,LOC108233328 other downstream 1357514 21985779 ~ 22065589 (+)
lin28b lin28b other downstream 1652702 22280967 ~ 22301585 (+)
kcns3b kcns3,LOC103372653 other downstream 2179614 22807879 ~ 22810520 (+)

Expression


Co-expression Network