LOC120547080


Basic Information

Item Value
gene id LOC120547080
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 21832948 ~ 21833782 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637027.1
gttgtctgtacactctgtcaaacttcacttggaaacacacaggagttgttcaagacgtttggagcgtttttttctctcctccatatcacctccggggctccaaAGATGCGCTCACAGAAAAGAACAACAAAGCAGTTCGCCGTCTTCACAACTCTGAGACAAACTGTAGCAGACGCTACGaaccggagcaaggaccaACCTCGCCTCATAACCAGGTtgtgacctatatttgctcggagctgtctgccggtccagatttacatgacgctgataatgacgccattgtgtctgcctgtaagacatgACGAGACAGCACACAGGAGCTTCagctagaaacaaccagatgtggcatcacgggcagaagctgtgaagagttcagctcggagtcggtcgagaagaa

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637027.1 True 400 lncRNA 0.50 4 21832948 21833782

Neighbor

gene id symbol gene type direction distance location
LOC120547079 NA coding upstream 23274 21806015 ~ 21809674 (+)
LOC120546759 NA coding upstream 78058 21751292 ~ 21754890 (+)
LOC120546757 NA coding upstream 105606 21723642 ~ 21727342 (+)
acat2 acat2,LOC102788057 coding upstream 139822 21687280 ~ 21693126 (+)
LOC120546740 wtap coding upstream 146031 21680522 ~ 21686917 (+)
LOC120547078 NA coding downstream 696 21834478 ~ 21843556 (+)
paplnb NA coding downstream 104696 21938478 ~ 21944082 (+)
smek1 ppp4r3a,LOC102789800 coding downstream 113517 21947299 ~ 21961671 (+)
LOC120546953 eva1a coding downstream 299059 22132841 ~ 22211477 (+)
LOC120546308 NA coding downstream 378728 22212510 ~ 22221145 (+)
LOC120546760 NA non-coding upstream 86394 21745581 ~ 21746554 (+)
G186297 NA non-coding upstream 290167 21540588 ~ 21542781 (+)
G186220 NA non-coding upstream 357644 21474552 ~ 21475304 (+)
G186210 NA non-coding upstream 484367 21347944 ~ 21348581 (+)
LOC120546175 NA non-coding upstream 679764 21151444 ~ 21153184 (+)
G186452 NA non-coding downstream 460660 22294442 ~ 22294697 (+)
G186506 NA non-coding downstream 701877 22535659 ~ 22537716 (+)
G186578 rhob,LOC104947257 non-coding downstream 883188 22716970 ~ 22719893 (+)
G186622 NA non-coding downstream 965953 22799735 ~ 22800058 (+)
G186641 NA non-coding downstream 1013090 22846872 ~ 22847674 (+)
gtf2h5 gtf2h5 other upstream 660309 21170948 ~ 21172639 (+)
kif25 LOC104961976,LOC100703631 other upstream 1972731 19852643 ~ 19860217 (+)
acp1 acp1 other upstream 2184792 19633500 ~ 19648156 (+)
zgc:193593 NA other upstream 2212165 19572573 ~ 19620783 (+)
nhsl1b nhsl1,LOC101470763 other upstream 2291116 19429595 ~ 19541832 (+)
erh erh,LOC100699790,LOC101174968 other downstream 110961 21944743 ~ 21947000 (+)
G186394 mycn,LOC108233328 other downstream 151997 21985779 ~ 22065589 (+)
lin28b lin28b other downstream 447185 22280967 ~ 22301585 (+)
kcns3b kcns3,LOC103372653 other downstream 974097 22807879 ~ 22810520 (+)
si:ch211-22i13.2 NA other downstream 1128251 22962033 ~ 22966010 (+)

Expression


Co-expression Network