G191555


Basic Information

Item Value
gene id G191555
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 2703198 ~ 2707931 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU260147
CCCCCATTGTGGCATTATTGATTGTGCAATATGAAGAAATATCTCATTACTATGGTTACAGtgacagagaaatgcacactaTATTTATCTAATTGCCAGAGAATGTAgcgaaaagaagaaaagaaaacaggaagCATTTCAGGACCAATCACATAGTGAAGAGTTTTTCAGTTAGGTGAGATGTTTCACCAACGAGCCCCAATTGACCGACCCCCTAAAAACAATCACACGCATCTTTCACATTTTTGGGGCTCGTTCCTGCTGTTTTGCTTCCACTTTTTCTGGCTGGTACGGAAGTTAATTAATGACAAAATTGCGAGTGAGCGCAAAACAAATTCAAGCTTTAATCAAGCAGGTTATACAGTAAGAGCTTGGATTTGGGGTTAAGTTTGAAATCTCAACTCACCTTTTCTGACAGCTATTTTTGCCGATTTTGTGAAAAACATGTTTCGGTTGAATCAGGCTTTTCCAATCGTATATTATGTTCAGTTAGAGATAGACTCACTGATTACGAAATCCATTCAATCGTACGACAGCCACACCTTGATTAGTGCACTAAATCCCCCAAACCAGCTCAGTTTTGAAGTTTTAAAACTCATTGATAGTTTAATATTATGTACTTTAAATTGGGTCAAATAACATTAAAGAGTGTTTCAAAGTTTTGGCACGCAAAGGTAAACAAACTACCAAAACTACAGCATGCTAATTTAAAGATAACATGCGACAGGAAGGCGGTCCACACAATGAGGTCTCAAAACATTGATAAAAGTCACAAATCGGTCCTTAAAAATTGCAAACCATGCTAAAAAAATCTGTTTCAGCATGCTCTCAAATCTCGACTCGCAGATTTATTACAGCGCAAATCTCTCTGTGTTCATTTTGTCATTAAAGAACTTCCATATTAAAAAAGCATCCAAACAAGTAACTCAATAAATTTCACTTCATTGGCGGcaaaagtctgaaaaaaaattataaaaatggaGTGCTGAAGCCAACAAGCAAGCGACCATTATTCTGCAACATTACTCACTTCCAGTAAATGCTTTTTATAGAACCAACTTGTCCACTAAACAGCAATGCTtaaagtaatttagtttttatataGTACATCTACGTCTCCATACTAAACCTTAGACATACATagcttaaaggggaactatgcagttttttttagcttaatttaccttaactgaacagcttcggagttaTTGGAATggctatatgacttttttcgggttgaatggtggtcgtctcgctcccccctagcgcctgtgagatgaaaaaccacccttgcttcagcgtcaggaagtatggcgtgatatcaggtctcaccATGTAACGAactgcttcacggcactgcacgcattcacgcccattcaggaaccggcttacaaggtagcgatggagtttttcacactatcgtcatggctgagccggttaaaaagaagcagaaagctaggaaagcattgtcggaggaacagaggaagaggaaacggcagactgcccgagagaggagtcagacacaagtaaacatatgagctgccaaatatctattctgaagctgtaggggggggctatatagagaaacctgccagcaaaaagccagaaaacagccaagaaatggccaaaactgcatagcgcccctttaactgtggaacacaaaatacagactgGAGGAAACCAAACATATTCCAAATAGCTAAGGGAAGAAAGaaaggtttttaaaaatgtaaccaGAGTAGAAAATAAACCTTACTGGATGCTTTAAATGTTGAGCTAACAAACATTCTTACTGGTCTTTAGTTATTTAGTTACGCATCGAGACTCGATGGCTCCTTCATTTAGATTTGTTAAGTGTACATAACCGTTAAGAACGTTATACTCAATTGAAGCTTATTACGGTTGGTAGGTCTTATTAGTAGTAAATATAGGTGAAATTAAACAGGTTTATTTAATAACATTGTTTGTTATACACAAGTTATACATACAGTTCAAAGCACCGCAGGGTAACACTCCAAATTACAGCCACTTTCTGcttcctttctttctgtaaAGCTGCAGGAATTAGACAGCACCAGAACGCAACGGAACATAATGAATAATGATTAGCTTTTCACAGGTTTATTGCACAAATGTAACCGACAGAAAAGCAGGATTATTCAGTGCACAAAATGCGGTTTTAGTGCGCTTTTGTTTTGTACTTTGAATTGGATTTTTCTGCTCAAGTACAACACGTGTcggaatatatttttttttacaattttcacaACACGATTCTGTACGTTTTAGACCTTCACGTAGACACGTCAGCTGCAAATTACAAAACTGTGGAGAGGTGTAATTTCAGAGGTTTACCCCGCTGTGGTCTCAGTTTTCCCCACTACAGAGGGATACACGTCATCTTGCAAAGACAAGGCCTCGCAAAAACTGAGGATGGACCCTAACAGGAACTAACTACAACTaccctcccccccaaaaaagaaagaaactgaGACAACTTGGAAGCGTAAACACAACCCACAAAAGGCAGTAGTTGACGAAAAAAGCCGGGAGATAGAAAACACAAATAATAGCAataggaataataataataataaacaggaATATTCTGGGAACTCCTCTACATCGTGTTGTTGTTCAGCGGCAAACTctggtttttattattttcatgaCAGCAGCTGCCTGAAGCGTTTGCAGACCCCccctttttaaatatgttttttttttctccaatccaatcttattttttttttattcgttTTTCCTGCTCCTTATCttacaaaaaaagagaacagaggacacaGGTGGTTGTGTTGTAGCTGTACTGATGCTCTGAGCCGGACCGGGGTGGTTGATAGGCACAGAGTGGAGAGTTTTGGCTCGGAGCTTGCATGCTGGAGTCACGCTtttgagagaggaagaggaggaagaggaagaaagaatagaaggggagagaaagagacgcTGTTTGGGGGATTTGATTTGACATAGCAACTGCTAACGCTGGGACTGCTGGGTGCTGCAGGCACGGCCCAGATCGTCCGATGTAATGTCCACGTTAGGGCTGTGCAAAAAGTCCAAATTTAAATCGCAATTACGATTTCGGTTCCTAACGATCGCAGAACACAGCGATCGAGAATGACggttattttgcacattacgttttgcagaTAAACTCTTAGTTTGTCTCGTGTTCTTAACGGGAAAAGTATGACAGGAAatgtcacagttcaaggtgttttcactgtggatttgtttaactgtttcactgttttgtgatttcaataaatgcaacttCTTCCCAAAAGACGACGAGTTATCGGGTTAAAAAAATTGTGATTTCAACATTGACCAAAAATATCTtgattatgactttttccgtaATTGAGCAGCCCTACTCTATGTTGATAAAAACTGGCAATGAAGTATGTTTTTCCTCATCGACGTATTACATCAACagacaatgattacatttaaaTCCATTTAGAAGTTAATTTAATTAGCAGTTATTCTGTTAGTCTTTTTTAGTTATTACATtctcaggctacatttacatcgctacgttTTTATCTCCGaaagaagaactaatctctgtttaaactaacacgcccaaaactaaatatctcatcatcatcctggtatactgggcataaacaggaggcagcgtggaggctccgccccctgctggtagttgccagtctcagagaacgagacgtcgtGACCGATAAGAGCCAATCAGGACGGAgaaacgttggcgtcagtgtcggcgttgccaaaggtctccgtttgcgggctttgagactgaaacacaaccccgcagattaCCAACCACAACGGGTCAGAAGAATTTCAAAATGtctccagagcagggggaatgagagggggaaacaccagagcagggggaatgagagggggaaacaccagagcagggggaatgagagggggggaaataacaccagagcagggggaatgagaggggggaaatgccagagtagaaggaatgagaggggggaaacgtagcaaaagatattcctttttaaaccaaaacgtagcgatgtaaatgtagcctgtagTTGCTACGAGCTGACTCTAAATCAAACGTTCGGCCGATTGACACGAACATCTTCAACAAAGATTTGACTGGAGATGGATCGATAACGACGAGCGACCCCAAACAGCACCAGAGggaagcagaggaggaggaggaggaggaggaggcgcgTCTATTTCTTCTTGCTGAACAGGCTGAAGCGTTTCTCCTTGTCTTTCTCTCGTTTGCCTGGGCTGGACTCGGCCGCCGAAGCCGCCGCAGCTGCCGCGGTAGCGACGGAGGCCGGCAGCGTCTGAGCGCGTGCGGCGGGGGCGGGCGTGCTATGGCTGCTGGGCGTCACCTCCACCTTGTCGCCCGGCACCGCGGTCGAGATGGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260147 True 4428 lncRNA 0.42 2 2703198 2707931

Neighbor

gene id symbol gene type direction distance location
LOC120548306 NA coding upstream 39520 2657857 ~ 2663678 (+)
LOC120548433 NA coding upstream 65922 2529180 ~ 2637276 (+)
rps27a rps27a coding upstream 194817 2504767 ~ 2508381 (+)
LOC120548117 LOC103362069,LOC108229017,LOC106525817,LOC101169632,LOC101471088,LOC100695262 coding upstream 502741 2193300 ~ 2200457 (+)
trnat-agu_15 NA coding upstream 581733 2121392 ~ 2121465 (+)
LOC120548310 NA coding downstream 121128 2829059 ~ 2829748 (+)
znf365 znf365,LOC100708019,LOC101465348,LOC102787219 coding downstream 415836 3123767 ~ 3137751 (+)
trnar-acg_20 NA coding downstream 441883 3149814 ~ 3149886 (+)
trnah-gug_17 NA coding downstream 442542 3150473 ~ 3150544 (+)
adob ado,LOC107097159,LOC103372108 coding downstream 465674 3173605 ~ 3176172 (+)
G191548 NA non-coding upstream 2751 2697963 ~ 2700447 (+)
G191340 NA non-coding upstream 59744 2642020 ~ 2643454 (+)
G191345 NA non-coding upstream 125990 2576231 ~ 2577208 (+)
G191335 NA non-coding upstream 168266 2530824 ~ 2534932 (+)
G191336 NA non-coding upstream 168922 2533743 ~ 2534276 (+)
G191556 LOC104953499 non-coding downstream 8105 2716036 ~ 2725525 (+)
G191560 LOC108247402,LOC107090937 non-coding downstream 30213 2738144 ~ 2740053 (+)
G191568 NA non-coding downstream 110053 2817984 ~ 2835208 (+)
G191581 NA non-coding downstream 117740 2825671 ~ 2894205 (+)
G191582 NA non-coding downstream 127703 2835634 ~ 2895066 (+)
LOC120548303 usp54,LOC106455943,LOC108247408,LOC104941643,LOC107104721 other upstream 386796 2268828 ~ 2316402 (+)
G191236 NA other upstream 598501 2047957 ~ 2104697 (+)
G191230 NA other upstream 698970 2002812 ~ 2004228 (+)
G191212 NA other upstream 753964 1948390 ~ 1949234 (+)
G190785 NA other upstream 923216 1701556 ~ 1779982 (+)
G191565 sptbn1 other downstream 48223 2756154 ~ 2761679 (+)
G191567 sptbn1 other downstream 54119 2762050 ~ 2766062 (+)
G191571 NA other downstream 62702 2770633 ~ 3018448 (+)
G191573 sptbn1,LOC107396444 other downstream 67377 2775308 ~ 2778367 (+)
LOC120548437 NA other downstream 386036 3093967 ~ 3110958 (+)

Expression


Co-expression Network