LOC120548437


Basic Information

Item Value
gene id LOC120548437
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 3093967 ~ 3110958 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU260292
TACTACACCCTTTAAAGGTTCCCGGCTCAGTTGCTTCCTCATTACTGCCTCTGAGTTTGGGACCCGTGCAGCTTCACACTGTGAATCTGAATCAGGATGGACAGCAACGGCTCCGTCTCCAACGCGCTGTCCAGGATGCAGATGGCGAAGGACATGAAGGAAGAGGACAAGCTGTACAGGTACAACGGCGTGCTGTACCCGCGCCTCATGTGCCCCGAGGAAAACCTCCAGGCTCTGCAGAACATGGAGGCCAGAGAGGACGACGTCATGCTGGTGGCTTACCCCAAATGTGAACACAAAGCGCTCCCAGTGCGGTTTCCAGAGGGAGGAAAGGCGTGACATTCCTGCTGTCAGCGTGGT
>XM_039784697.1
tctcattttcccAGTGCTACTACACCCTTTAAAGGTTCCCGGCTCAGTTGCTTCCTCATTACTGCCTCTGAGTTTGGGACCCGTGCAGCTTCACACTGTGAATCTGAATCAGGATGGACAGCAACGGCTCCGTCTCCAACGCGCTGTCCAGGATGCAGATGGCGAAGGACATGAAGGAAGAGGACAAGCTGTACAGGTACAACGGCGTGCTGTACCCGCGCCTCATGTGCCCCGAGGAAAACCTCCAGGCTCTGCAGAACATGGAGGCCAGAGAGGACGACGTCATGCTGGTGGCTTACCCCAAATGTGATAAAGATGATTTCCCTCTTCAGGTTCTGGATGAGACGCCCTCTCCAAGGTTACTGGGGACTCACCTGCACCCTGACAACATCCCCAAATCTTTCGGTGCAAAGAAAACTAAAATGCTGGTGATCTTCAGGAACCCTAAAGACACGCTGGTCTCCTTCTATCATTTCACCAACAGCAACCCGGTCCTCCCAACCATGCAGTCCTGGGAATCCTTCTACTCTACCTTCCTGAGTGGAGATGttcccTGGGGGTCGTACTTTGATCATGCTTTGGCCTGGGAGAAGAGGATGGACGACCCCAACGTCATGATTGTCACCTATGAAGAGCTCAAACAGGACCTGAGCGACGGCGTGCGTCAGATCTCCACCTTCTTCGGCTTCAGCCTGACGGAGGCTCAGGTGCAGCAGATCGCAGAGCGGAGCACCTTTACCGCCATGAAGGAGAACAACTCCCTCGGTACTATGGGAAACGTCATCTTCAGAAAAGGCGAGGTCGGGGACTGGAGGAACCACTTCACACCAGAACAGAGCCGAGAGATGGACGAAGCCTTCAACAAACACCTGGCAGGAACCAGGCTGGGAGACAAACTCAACTACCAGCTGCACTGTCAGTAGTAGTTCCCCTCTGTAAGATCCTTTGACTCTAATGCCAGGCTCAGACTACACGAATTCAGCCCAATTTTGACCCGACAGACAGACGCTTCAGCACCACGACAGAGAATGTCAAGCATGCCTAGTGTGACATGTTCTACCACGTGTTTCTTGACATTGACCAATAGGAAGAGagagctctctctgcctctctggtgcacatatgtaaacatgGTGAAAAA

Function

GO: NA

KEGG:

id description
K22523 SULT6B1; sulfotransferase 6B1

RNA

RNA id representative length rna type GC content exon number start site end site
TU260292 False 360 TUCP 0.56 2 3093984 3095422
XM_039784697.1 True 1141 mRNA 0.52 6 3093967 3110958

Neighbor

gene id symbol gene type direction distance location
LOC120548310 NA coding upstream 264219 2829059 ~ 2829748 (+)
LOC120548306 NA coding upstream 430289 2657857 ~ 2663678 (+)
LOC120548433 NA coding upstream 456691 2529180 ~ 2637276 (+)
rps27a rps27a coding upstream 585586 2504767 ~ 2508381 (+)
LOC120548117 LOC103362069,LOC108229017,LOC106525817,LOC101169632,LOC101471088,LOC100695262 coding upstream 893510 2193300 ~ 2200457 (+)
znf365 znf365,LOC100708019,LOC101465348,LOC102787219 coding downstream 12809 3123767 ~ 3137751 (+)
trnar-acg_20 NA coding downstream 38856 3149814 ~ 3149886 (+)
trnah-gug_17 NA coding downstream 39515 3150473 ~ 3150544 (+)
adob ado,LOC107097159,LOC103372108 coding downstream 62647 3173605 ~ 3176172 (+)
kif11 kif11 coding downstream 104286 3215244 ~ 3250866 (+)
G191617 NA non-coding upstream 37731 3055902 ~ 3056236 (+)
G191596 NA non-coding upstream 117716 2970984 ~ 2976251 (+)
G191595 NA non-coding upstream 128287 2964930 ~ 2965680 (+)
G191594 NA non-coding upstream 141349 2952230 ~ 2952618 (+)
G191582 NA non-coding upstream 198901 2835634 ~ 2895066 (+)
G191610 NA non-coding downstream 31099 3142057 ~ 3146849 (+)
G191650 NA non-coding downstream 198090 3309048 ~ 3314217 (+)
G191654 NA non-coding downstream 286437 3397395 ~ 3397727 (+)
G191656 NA non-coding downstream 322388 3433346 ~ 3433604 (+)
G191785 NA non-coding downstream 512392 3623350 ~ 3624702 (+)
G191571 NA other upstream 75519 2770633 ~ 3018448 (+)
G191573 sptbn1,LOC107396444 other upstream 315600 2775308 ~ 2778367 (+)
G191567 sptbn1 other upstream 327905 2762050 ~ 2766062 (+)
G191565 sptbn1 other upstream 332288 2756154 ~ 2761679 (+)
LOC120548303 usp54,LOC106455943,LOC108247408,LOC104941643,LOC107104721 other upstream 777565 2268828 ~ 2316402 (+)
LOC120547552 NA other downstream 52866 3163824 ~ 3339085 (+)
arfgef3 arfgef3,LOC102791283 other downstream 1139647 4250605 ~ 4347579 (+)
G191903 NA other downstream 1176939 4287897 ~ 4288644 (+)
LOC120548449 NA other downstream 1256193 4367151 ~ 4368326 (+)
LOC120548511 LOC101485366,LOC100693926 other downstream 1518099 4629057 ~ 4678348 (+)

Expression


Co-expression Network