G191789


Basic Information

Item Value
gene id G191789
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 3638179 ~ 3640170 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU260530
GGACCCCTCGTCAGCTTTTACTGTAGATACAGTTAGCAGTACATACAGCACATTATATAAGACTTGGGCAGCAGAGAAGCACGGTATGTAACGGTAACTAACTAAGGACAGAGAGGCATTACAAACTGTTGCAACTCAGgttaaaaaccaaacacaagtGTACACAACATTTAACAGATACTGATGGACCTGAAGGTTTATAATTGTTAAATAATAATaccgaaaaaaaaacaacatcaaaaaTACATTACCTTTCTCTACTTTTCAAACATCTGACAAGTGAAAATAATTACATCTCAACAAAATCCTTAGAATCAGTTTGAACTATTTTCAAACAGATTTTTGACCAGGTCTTTACTCTGCCATCCCACTGTATAACCTGACACAGTTTGGTCCCatttacaaacaacacacatcTCGCAAAAACTACCTTTCTGACATCACGTTATCCCATGTGTCCGAGCATGAGTTCCTCCCACGTCATCTCCCATTTCAAAGCAATACAATGTGTCCTATTTGTATTCAGCACATGGATGCTGACCTTTTCCCCAGTCAGCAGTTGCTTTTCATGATAAGTCCGACTCATGATGTGAACGTGGTCCTTCTCAAACGGATTCTTGGAGAGCAGCTGCTTCTGGCTCCTGCTGTTTCCGTTAACTGATAGAAAGGGTCCATTGTTGTATAAGGTGCTTTTTCAGACCCTATAGACGCTCAGTGAGTGACCCAGATCAGAGCTGATTGACTGTTGCTTGGTACACCTATGGGTTTGTTGCCAGTTGGTCTTTAGGACTTATAACCCTATATAGGACATGAAACACGCTGAGTGTTTAAAACCAGAACTGCTCAGCTGCAGACAATAGACAGCAGTGGCGGGAGAGACAACAAAGTTACATAAAACTACCCCAGAGGCCAATGTTGCTCGAGATCGGTCTTGGTCTCAAAACAACTTTTTGAAGGTTTTGGTCTCGTCTCGGAATCGACCGCATTTTTACTTGGCCTCGACTCGGTCTCAGGTAAAGAggactcaggattttatttcaagattggtcaagaccacaactgccttttgtttcttttaccGAGGCATTTCTCATGATACACTCATTAGAGGTAAATGAAGAAgaatcttaattttttttttatgggaatATGGATCTTTCAGACTAGTTTGAGGATTGCCTATGGTTAGCATTTTTCCACATTTATCGTGTCATGCAGCGTGGGACTCGCACTCGCACTGGTCTCAACCCCtaaaagtcttggtcttgtctcggcctcgccctgccttggtcttggtcttggtcttggctCGGTCTCAACACCCCAAAGTTTCGGTtttgtctcggtctcgatatACTTTTGGTCTggggtgatgacttggtctcggtttaggtggtcttgaccaCAACACTGCCAGAAGCAGAGCGAGCCACAATCACTGAAACACCTAGACTGGGTTACGGCCATAGGTCACATAGGTCGTTTGTGCAAGCAGCAATTATGacttatatttatgtttataataGCGGCGTCTTGACAGGAGCAAAGCTGGAAGTAAGGTGAAGAAGTATTAAGGCCTTTACAGACTggggatttttttgttgttttagtcatgACTACTTCACACAGAACGCAATAAAGCGACgtgatttatttcaaaataaggtCGATTTTCCTGAGCTTTCGCACCGCGAATGAAGACATCAACCAATCACGTTGTGTTGTTTACTTATGAGGATCATAATAGAACAACACGGAGGCTGCTGTCCCAACCACAGACTGTACAGACAGCAAACTGTGTTACTCCTTTCAACCTTGACAAAGGCAGCGTTTACCAGAGACACTTTTTCTGTATATGTctactttgtttttttcccgTCACCTTCAGCGTCATGTGCGTAACCGGAAGTAAAGTAgcgtctgattttaacccaaaccaacattgtttttctaaacttaactaagtagattttgtaatataataataataat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260530 True 1992 lncRNA 0.42 1 3638179 3640170

Neighbor

gene id symbol gene type direction distance location
ppp1r3ca ppp1r3c coding upstream 46383 3589225 ~ 3591796 (+)
fgfbp3 fgfbp3 coding upstream 76759 3548104 ~ 3561420 (+)
LOC120548444 LOC108246626 coding upstream 103951 3532714 ~ 3534228 (+)
LOC120548518 LOC103361435,LOC104937509 coding upstream 145806 3480321 ~ 3492373 (+)
LOC120548100 LOC103372105 coding upstream 256088 3347038 ~ 3382091 (+)
LOC120547503 ankrd1 coding downstream 173237 3813407 ~ 3827078 (+)
LOC120548162 NA coding downstream 192416 3832586 ~ 3845675 (+)
LOC120548448 NA coding downstream 367556 4007726 ~ 4064499 (+)
LOC120547632 NA coding downstream 710434 4350604 ~ 4352975 (+)
LOC120548450 NA coding downstream 738035 4378205 ~ 4382442 (+)
G191787 NA non-coding upstream 11260 3626655 ~ 3626919 (+)
G191785 NA non-coding upstream 13477 3623350 ~ 3624702 (+)
G191656 NA non-coding upstream 204575 3433346 ~ 3433604 (+)
G191654 NA non-coding upstream 240452 3397395 ~ 3397727 (+)
G191650 NA non-coding upstream 323962 3309048 ~ 3314217 (+)
G191790 NA non-coding downstream 448 3640618 ~ 3643020 (+)
G191793 NA non-coding downstream 62422 3702592 ~ 3730541 (+)
G191821 NA non-coding downstream 211117 3851287 ~ 3851808 (+)
LOC120547548 NA non-coding downstream 241495 3881665 ~ 3882305 (+)
LOC120548325 NA non-coding downstream 274389 3914559 ~ 4000186 (+)
LOC120547552 NA other upstream 299094 3163824 ~ 3339085 (+)
LOC120548437 NA other upstream 527221 3093967 ~ 3110958 (+)
G191571 NA other upstream 619731 2770633 ~ 3018448 (+)
G191573 sptbn1,LOC107396444 other upstream 859812 2775308 ~ 2778367 (+)
G191567 sptbn1 other upstream 872117 2762050 ~ 2766062 (+)
arfgef3 arfgef3,LOC102791283 other downstream 610435 4250605 ~ 4347579 (+)
G191903 NA other downstream 647727 4287897 ~ 4288644 (+)
LOC120548449 NA other downstream 726981 4367151 ~ 4368326 (+)
LOC120548511 LOC101485366,LOC100693926 other downstream 988887 4629057 ~ 4678348 (+)
G192040 LOC104951079 other downstream 1246206 4886376 ~ 4887023 (+)

Expression


Co-expression Network