G191962


Basic Information

Item Value
gene id G191962
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 4726574 ~ 4773778 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU260737
gcacacacacacacacacacacacacacacacaaaaaaaggttTCAGTAAATAGGACTTTTTTTAAAGGGCTTCTCTGACATTTTAGATTTCAGTTTCAGTTATTTGGCTTCATTGGAAAACTGTCAatgtcaagtctcaagtcatatGGAAAACAGCTTGTTAACACTGCAAGCATGCCTCAGTACAACAATGGACGCTCCCAGTGCTAAGTTACCGCAGGCGTGTTAGCCGATGTCTAATGGTACCATTTGGTTTTAATGAAGAAAGGGAACAAATCAATGTACTAACAAGCTCAaatatggagagagagaaggaaaaacagCGCACATGACTCTTCTCTCGAATAACAGAAAAGAAACTGCTGAGATCAAACTAAATTCAAATTTCAAAATGCCAAAGTGTCGCTTTTGTGTTGCGTCTTTTAGAGTTATAATGAGCCAGTTTGAGTGTTCCACTTAAAACACAGCACTGACAAAACTTCTAATTCCATCATAGTTTCATCCGAAAAATGTCCTTTTGACATCTCTTTATTgtctaataaataaaatactttcCAAGaccttattttttctttaaatacaatcattggttcaaccttttttttctttttcccattCACAAGTTTAgggaacaaaagaaaacattctTTAGACACAAAGATAGACACAGGATTCAGAACATCATGTACAGAAATGACTCTTTCTCTCGACTATGCGTGCATGCACATTTGTACATTATccctctcttacacacacacacacacacacacacacacacacacacacacacaccacaaacggAGTTTGGTTTTGTCCACTGCTTTACCTGCGTCAGACATCCATGCGGTCCGAGTGAAGGAGCATTTCTCATAGTATCTGACCTGCGCTTACATGCTGCTCGAGCATATATTTGGATGGGATTATGCACCAATGGACAAACAACAAGAGCACAGAAaccataaaaaaagagagatacaGATGGTCTAGTATAATTCCTGGAGTGGTCAGAATCTGGAAAAGTTCAGGACGTTTGATTCCAGAAGGAGCGTGTTTCTCTTTAAATATTATATCTTTGCTTGAAGATTTCTGAAATGTGGTTGGTGTATGGTTGTTGTTGTAATcgtatgtgtatgttgttaatcgtgtgcgtgtgtgtgtgtttctaggcCACAGTCTCGTCTCCAAAGTAGGAGAATCCTTTAAACTCATCTTGGTTGATCTGCTTGATGATGCTGGCCTCCGTCGGCGTCAGGTTGGGTTCTTCGCGCGTAAAGTCCTGGTCAAAGTTATTCACATCCCTTTTGGTTTTCTggaaaacaaagaacaacagAGAACGCTCTCAGAGTTCATTCCTTTTAAGATCAGCTGTTTTGGTGGACTTCTACATTGTTTATGTGATCGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260737 True 1405 lncRNA 0.39 2 4726574 4773778

Neighbor

gene id symbol gene type direction distance location
LOC120547947 NA coding upstream 110613 4613923 ~ 4615961 (+)
LOC120548456 NA coding upstream 125308 4503362 ~ 4601266 (+)
LOC120547943 NA coding upstream 148213 4575583 ~ 4578361 (+)
LOC120547941 NA coding upstream 177800 4544612 ~ 4548774 (+)
LOC120547944 NA coding upstream 214762 4487507 ~ 4511812 (+)
ccdc172 NA coding downstream 616641 5390419 ~ 5427836 (+)
LOC120548190 LOC102080562,LOC102201633 coding downstream 1005411 5779189 ~ 6190313 (+)
setd4 setd4,LOC102797995 coding downstream 1522469 6296247 ~ 6308199 (+)
LOC120548010 itsn1 coding downstream 1594259 6368037 ~ 6377416 (+)
pdxkb LOC104925589,LOC107376125,LOC100693660,LOC103151893,LOC103476575,LOC101069818,LOC106527750,LOC103387811 coding downstream 1627253 6401031 ~ 6431130 (+)
LOC120547946 NA non-coding upstream 117529 4608142 ~ 4609045 (+)
G191918 NA non-coding upstream 302767 4384230 ~ 4423807 (+)
G191909 NA non-coding upstream 310287 4348505 ~ 4416287 (+)
G191890 NA non-coding upstream 509521 4216818 ~ 4217053 (+)
G191887 NA non-coding upstream 539917 4186404 ~ 4186657 (+)
G191981 NA non-coding downstream 55841 4829619 ~ 4830101 (+)
G192035 NA non-coding downstream 109392 4883170 ~ 4883655 (+)
G192037 NA non-coding downstream 110014 4883792 ~ 4884103 (+)
G192039 NA non-coding downstream 112195 4885973 ~ 4886225 (+)
G192103 NA non-coding downstream 1068755 5842533 ~ 5842887 (+)
LOC120548511 LOC101485366,LOC100693926 other upstream 48226 4629057 ~ 4678348 (+)
LOC120548449 NA other upstream 358248 4367151 ~ 4368326 (+)
arfgef3 arfgef3,LOC102791283 other upstream 378995 4250605 ~ 4347579 (+)
G191903 NA other upstream 437930 4287897 ~ 4288644 (+)
LOC120547552 NA other upstream 1387489 3163824 ~ 3339085 (+)
G192040 LOC104951079 other downstream 112598 4886376 ~ 4887023 (+)
atrnl1a LOC102310066,LOC100692310,LOC101487275 other downstream 129944 4903722 ~ 5248736 (+)
si:dkey-22n8.3 LOC103376236 other downstream 1246344 6020122 ~ 6396899 (+)
itsn1 itsn1 other downstream 1550737 6324515 ~ 6360991 (+)
LOC120548025 ppp1r1c,LOC106939859 other downstream 1711803 6485581 ~ 6505851 (+)

Expression


Co-expression Network