G192143


Basic Information

Item Value
gene id G192143
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 6311396 ~ 6315101 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU260973
gagtctgCTGGGTTGGCTCCGTCTACCCTCTCTGGCGGACCAACCACGGCTGGGTAAGTGGAAACGCATCTCTAACTGTGCGCCGCTTGGGATTTTTCCCGGAGATGTTGCCACAGACACCCAGTTCGTAATACTGCAAAATGCAAGGTCTTTAAACCGGGGGCCAAAGGCTCAATCACCATTGTGTTAACCTCGTTCTGTGATTGTGactatttaaagtgctcatattatgctttttggctttttccctttcctttattgtgttatatatcttttttgtgcacgttataggtttacaaagtgaaaaagcccaaagtcccccccaaagggacttaccatctccaacagaaaacactgttcaccaactgctccaaacagctctattgtagtccagcctttacttcagagacaaacgtggtcactttgtaacacacgttataatgctcgcctagctgctagcgtggcacgccctcatactctgcttctgactggctagtagtccttacctagctaccgtgcatgtgcgactcctaGCAaggatggaacagaagtgagatgtctcactctgtagctaaaacagagagctcaacacacagggtgaaaagaggagctgcagcaatgtgcagtacaacaaaaatatggtgttttttgaaaaattcAACCACATAaaactattctggtacaacctctaaatacaattatgaacctgaaaaatgagcataatatgaacactttcaGTTGCAGCGGTTGCAATTTCAATATTTTCCACACGGTGGCAGCAGGTTTTCGATCATTAGACCAGTACTTCATTCTCCCTTTTACAACATTTActtaaaatgagaaaagaatGAGGTCTTATCCTGGGGTAATTTGTTTGTAATATGTCTCAACTAAATGTTAACTAAAAATTGTGTAAACAGTtattacaaaaacaatacatcTAATATACTAACGGTGGTGATTTGCTGTACACTGGAATCCTCCATGGAGTCAGCCAGATGCCTGATACACAAAGCAATAAACCTAAAGCTCATATTGATTAATCCAATTGCTATTGAAATTTAGTTCAGGAATGAGAAGATCAGCAGCAAGGAAGCAAGCATGCAAGTCAgttagaaagagaaagagaaaagatcTCACCTACTAAAGGATCCTGAACACCTGAGGGAAGTATGAAGGGGAGGAAACAAGACAGGAAACAAAcaaggatttttgtttttttaaagggtgaAAGAGAAGCAAAAGAGCGTGAAATGATCAGAAAAACTGAAGATTTCCATTCTGAAAGGAACTGCTGGGATTTTGTAGAGAACACATTTCAAATCATTTTGCAGACACTCCACGAAGATTGGGTTTAAAATGTTATGTTACtgttaaccctcgtgttgtgttcccgtcgaccatgaacATTTGGgtaaaaattgaaaataaactttttttggcgttttttctttttttttggactaTTTTGGCGCTTTTTCAAACATTATAGtcaatgtttttttgaaaagttCATGTTCAATAAACCTAATGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260973 True 1536 lncRNA 0.40 2 6311396 6315101

Neighbor

gene id symbol gene type direction distance location
setd4 setd4,LOC102797995 coding upstream 3197 6296247 ~ 6308199 (+)
LOC120548190 LOC102080562,LOC102201633 coding upstream 121083 5779189 ~ 6190313 (+)
ccdc172 NA coding upstream 883560 5390419 ~ 5427836 (+)
LOC120547947 NA coding upstream 1695435 4613923 ~ 4615961 (+)
LOC120547943 NA coding upstream 1733035 4575583 ~ 4578361 (+)
LOC120548010 itsn1 coding downstream 52936 6368037 ~ 6377416 (+)
pdxkb LOC104925589,LOC107376125,LOC100693660,LOC103151893,LOC103476575,LOC101069818,LOC106527750,LOC103387811 coding downstream 85930 6401031 ~ 6431130 (+)
plekha3 plekha3,LOC102799655,LOC103387813 coding downstream 132043 6447144 ~ 6467228 (+)
LOC120547793 LOC108247470,LOC106529920,LOC107096283,LOC102227626 coding downstream 238785 6553886 ~ 6583738 (+)
LOC120548221 NA coding downstream 280940 6596041 ~ 6672024 (+)
G192125 NA non-coding upstream 21125 6272922 ~ 6290271 (+)
G192123 cbr1 non-coding upstream 24025 6268397 ~ 6287371 (+)
G192100 NA non-coding upstream 120554 6049398 ~ 6190842 (+)
G192103 NA non-coding upstream 468509 5842533 ~ 5842887 (+)
G192039 NA non-coding upstream 1425171 4885973 ~ 4886225 (+)
G192203 NA non-coding downstream 156438 6471539 ~ 6471881 (+)
G192205 NA non-coding downstream 162810 6477911 ~ 6478234 (+)
G192212 NA non-coding downstream 191220 6506321 ~ 6507436 (+)
G192214 NA non-coding downstream 194623 6509724 ~ 6510442 (+)
G192245 NA non-coding downstream 352283 6667384 ~ 6667710 (+)
atrnl1a LOC102310066,LOC100692310,LOC101487275 other upstream 1062660 4903722 ~ 5248736 (+)
G192040 LOC104951079 other upstream 1424373 4886376 ~ 4887023 (+)
LOC120548511 LOC101485366,LOC100693926 other upstream 1633048 4629057 ~ 4678348 (+)
LOC120548449 NA other upstream 1943070 4367151 ~ 4368326 (+)
G191903 NA other upstream 2022752 4287897 ~ 4288644 (+)
itsn1 itsn1 other downstream 9414 6324515 ~ 6360991 (+)
LOC120548025 ppp1r1c,LOC106939859 other downstream 170480 6485581 ~ 6505851 (+)
zc3h15 zc3h15 other downstream 460642 6775743 ~ 6789086 (+)
LOC120547751 LOC103371019,LOC107095977 other downstream 485413 6800514 ~ 6804552 (+)
bean1 bean1,LOC102779979 other downstream 1751235 8066336 ~ 8119063 (+)

Expression


Co-expression Network