G192282 (LOC103387761,LOC103476592,LOC106529247,LOC108242979,LOC102217296)


Basic Information

Item Value
gene id G192282
gene name LOC103387761,LOC103476592,LOC106529247,LOC108242979,LOC102217296
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 6834017 ~ 6934678 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU261154
gtttattttgtccCAAATTCAAGCATTGATTTTGTCCAGACTGATGTAGTTTGGGAACCATCATTGCTGCAGAATGACATCATAGCCTGCCAGTTGTTGCCTTAAACAAAGCGCGTTCAGTGCTACAGTCATGCTGTGACCTTGGCTTTACAACCAGTCATTGCTTTATACCCGCAAGCAAGGTCCAACCACATACTTATATTCATACTAAATACACCAAAAAGTACTATTACATATCTATAGCGatgatgtttttatttcaacTCGGTATCAGAGGTACATATTTACTGATTTCACACAAATGATACCAGGCTACATGTATGTTCTTCACACGGTAGCACGACACGGAGAACACTTACATCAACATGACAAAAAGACATGCACAAACGAGGCAGCGGTGGTAAACACTGTTGGCTAACGGCACCGACTGACCGTTGGCCAGAACACAAGGAAGCAATCGATCACAATGGGTGATATCACTGATTTTGACGATGTGTAGGGGTGAGGAGAGGATgaggggagacagaggaggaggaggaggaggaggaacagaTAAGGGACAGGAGAATAAGAAGAAAGGAGAAGGGCTAATACCTAAAATATTAAGACAAATCGTAACACTGAGTACCATAACaaacataaataatattttCAGTATTGACAATAAATATCTCATAAGTTATCTCATAAATAACATTATTATCCCTTTGTAATAACATATATCCTTAAATCTGATATGGCCTGCACACTTTCCCATCAAATAGTATATAATTTACCTTACTGCAgtggacacagacacaaacacacacacacacacacacacacagtcagacagacaca
>TU261156
tacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccttttatttctttctctttaagtACAATTCTGTCCAGTGTTACGGGAGCAATACTGTAGGACCAGGGACACAGGGTAATCTAAAGGGGGTTTAAAGGTAATGCTTAGCTATTTTGGGGTCACATGCAAACTGATATGTACAACTGTAAACTCCCTCAGtcccaccctccctcccttttaCCCCCTCTTCATATGTccgtctctctgcctctcttcttACAGACCTTTCTTCCACCAAAACACATCTTTACACTGCCCGTCATTCTCCCTTCCTTTCATTTAGCTACTAATTTCCTCTATCCTGATAATTCTTCTCTCTTTAACCCCCTCCCTTTCCCTTGTCTCGCCCTGACTCCCCAATCTGTAAACATGTCTATTTCAGGTCCCCAGCGTCTCCCTGGATGGTCTTTTTGATGCGGAGCAGCATCGTGGTCAACCACTGGTCCAGACGAGACACCGAGTCAAACTCCTTAACGGCCTCCGTGAACGCCTCGCTGTTCTGCTCCTCGTGGGCATCTAGGAGTTTCTTTAAGAGTTTGAGCTCTCTGGAGTCTGAGAAGGCTGGAAACATCTCCTCGTACTTTTCTATGGccaACTTGGCGTTGAGTTCATCCACTATGAAGTGACAGAGTGAAGCCTTGAAGAAATACTCTTTAGCGTTGTACTTCAACAGAGGATTGTCCATGGTGTTCATAGCaacctgaaaaacacacacacacacacacacacacacacacacacacacacacaca

Function

NR:

description
PREDICTED: beta-soluble NSF attachment protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU261154 False 840 lncRNA 0.40 2 6871964 6934678
TU261156 True 878 lncRNA 0.47 4 6834017 6874217

Neighbor

gene id symbol gene type direction distance location
LOC120548221 NA coding upstream 161993 6596041 ~ 6672024 (+)
LOC120547793 LOC108247470,LOC106529920,LOC107096283,LOC102227626 coding upstream 250279 6553886 ~ 6583738 (+)
plekha3 plekha3,LOC102799655,LOC103387813 coding upstream 366789 6447144 ~ 6467228 (+)
pdxkb LOC104925589,LOC107376125,LOC100693660,LOC103151893,LOC103476575,LOC101069818,LOC106527750,LOC103387811 coding upstream 402887 6401031 ~ 6431130 (+)
LOC120548010 itsn1 coding upstream 456601 6368037 ~ 6377416 (+)
cdh11 cdh11 coding downstream 758910 7693588 ~ 7790218 (+)
chrna1 chrna1,LOC103363491,LOC446087 coding downstream 953310 7887988 ~ 7905745 (+)
LOC120547970 NA coding downstream 998447 7933125 ~ 7938496 (+)
LOC120547971 LOC102778848,LOC102194630,LOC102290574,LOC101476901,LOC100711709 coding downstream 1008031 7942709 ~ 7947821 (+)
trnaq-cug_15 NA coding downstream 1016439 7951117 ~ 7951188 (+)
G192252 NA non-coding upstream 146442 6687332 ~ 6687575 (+)
G192244 NA non-coding upstream 158034 6674615 ~ 6675983 (+)
G192245 NA non-coding upstream 166307 6667384 ~ 6667710 (+)
G192214 NA non-coding upstream 323575 6509724 ~ 6510442 (+)
G192212 NA non-coding upstream 326581 6506321 ~ 6507436 (+)
G192329 LOC108281047 non-coding downstream 187522 7122200 ~ 7123178 (+)
G192333 NA non-coding downstream 194174 7128852 ~ 7219024 (+)
G192359 NA non-coding downstream 900745 7835423 ~ 7835707 (+)
G192375 NA non-coding downstream 971892 7906570 ~ 7906940 (+)
G192381 NA non-coding downstream 973085 7907763 ~ 7952125 (+)
LOC120547751 LOC103371019,LOC107095977 other upstream 29465 6800514 ~ 6804552 (+)
zc3h15 zc3h15 other upstream 44931 6775743 ~ 6789086 (+)
LOC120548025 ppp1r1c,LOC106939859 other upstream 328166 6485581 ~ 6505851 (+)
si:dkey-22n8.3 LOC103376236 other upstream 437118 6020122 ~ 6396899 (+)
itsn1 itsn1 other upstream 473026 6324515 ~ 6360991 (+)
bean1 bean1,LOC102779979 other downstream 1131658 8066336 ~ 8119063 (+)
meis1b meis1,LOC101073206,LOC106613898,LOC103387108 other downstream 2179978 9114656 ~ 9195416 (+)
kcnq5a LOC101074332,LOC101486129 other downstream 2562113 9496791 ~ 9602882 (+)
ddx43 ddx43,LOC107693529,LOC107588708 other downstream 2671847 9606525 ~ 9624564 (+)
arhgef33 arhgef33,LOC107098984 other downstream 2719226 9653904 ~ 9673252 (+)

Expression


Co-expression Network