G192633


Basic Information

Item Value
gene id G192633
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 9397548 ~ 9419324 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU261618
tttaaaaaaaaaagttttattaaGTCTGACACATGCACATGTGTAAAAGCACCTCAAAACAACATGATTCATAGAATCACTTTTAAAATACAGAGAAATTCTCATTTATCTGAAAGAAGGAACCAAACATTCCTAAATGACATATTTCAATACCTGTATGAACCAAGATTTTACTCACTTttcttaataaaaataatacttTTTCAAGGTTATGGCATCCTGAAGAAGATTTACAACTTAATGGTGAAGTAACATTACAAAAGTATTACAGACTCGAGTCTTAAATTCTAGAGCAACAATACGCTCAGCAAAACCTGGGATGGTATATCGTAGATGGCCATCCGTCTTGTGTTTTGGTTAATCCAGCAACATGAATGCTGCAATCTGACAGGCTATTTGACTGGTGAGCAACTCAGATAAACACCAACGTGTATTTTGTTGTATGTGTCATGTTGCCTTGTTTGATGCCAGTATCGCAACTTAAGAAGCTGCCTTGTGAACAAAAAGTGTTTGTTATTCCCAAAGAGGTACAAATGCAGTGGGACCAGACCGTACAGCTCCTTCTCTCCTTCAGCTCTGCTTTGGACGCTTTGACTGCGGGGTGTCAGACTTTGTGTCTGCTGCTTTCTTGGATGCTGCTTTTTTTCTAGAATCTTTTTCGTCTGTATTGTACAGAGCATTCCTGACAAAGCGTGCAGCAGCCCCCTTATCCAGACGGGCAGCTTTCTTCCTGTCTGTAATCTCTTTCACTTTGTTCATGTACGTCCTTATTCGCTC

Function

GO: NA

KEGG:

id description
ko00230 Purine metabolism
ko03013 Nucleocytoplasmic transport

RNA

RNA id representative length rna type GC content exon number start site end site
TU261618 True 777 lncRNA 0.39 2 9397548 9419324

Neighbor

gene id symbol gene type direction distance location
LOC120548362 NA coding upstream 63550 9327374 ~ 9333998 (+)
LOC120548133 actr2,LOC104930021,LOC108423375,LOC105008543 coding upstream 449443 8930547 ~ 8948105 (+)
aftphb NA coding upstream 470058 8917425 ~ 8927490 (+)
LOC120547907 lgalsl,LOC104930018,LOC102203068 coding upstream 481852 8893346 ~ 8915696 (+)
LOC120547906 NA coding upstream 485216 8909665 ~ 8912332 (+)
LOC120547702 LOC101470025,LOC103386883 coding downstream 2020 9421344 ~ 9437910 (+)
pno1 pno1 coding downstream 23552 9442876 ~ 9447476 (+)
LOC120548339 NA coding downstream 327984 9747308 ~ 9754782 (+)
mrps5 mrps5 coding downstream 678408 10097732 ~ 10123497 (+)
zgc:65997 LOC101480976,LOC102212345,LOC100706081,LOC104967569,LOC107089893,LOC105937212 coding downstream 763772 10183096 ~ 10187447 (+)
LOC120548135 NA non-coding upstream 339130 8977204 ~ 9058418 (+)
G192530 NA non-coding upstream 492671 8857991 ~ 8904877 (+)
G192464 NA non-coding upstream 1019849 8369378 ~ 8377699 (+)
LOC120548141 NA non-coding upstream 1268185 8126718 ~ 8129363 (+)
G192413 NA non-coding upstream 1271555 8124918 ~ 8125993 (+)
G192667 NA non-coding downstream 68439 9487763 ~ 9491128 (+)
G192691 LOC104930997,LOC101166076,LOC103372934,LOC102208791 non-coding downstream 215441 9634765 ~ 9638011 (+)
G192692 eef1a1a,LOC103386869,LOC105912050,LOC103476462,LOC106576970 non-coding downstream 219057 9638381 ~ 9640978 (+)
G192713 map4k3 non-coding downstream 259412 9678736 ~ 9680975 (+)
G192733 NA non-coding downstream 347937 9767261 ~ 9772128 (+)
meis1b meis1,LOC101073206,LOC106613898,LOC103387108 other upstream 202132 9114656 ~ 9195416 (+)
bean1 bean1,LOC102779979 other upstream 1278485 8066336 ~ 8119063 (+)
LOC120547751 LOC103371019,LOC107095977 other upstream 2592996 6800514 ~ 6804552 (+)
zc3h15 zc3h15 other upstream 2608462 6775743 ~ 6789086 (+)
LOC120548025 ppp1r1c,LOC106939859 other upstream 2891697 6485581 ~ 6505851 (+)
kcnq5a LOC101074332,LOC101486129 other downstream 77467 9496791 ~ 9602882 (+)
ddx43 ddx43,LOC107693529,LOC107588708 other downstream 187201 9606525 ~ 9624564 (+)
arhgef33 arhgef33,LOC107098984 other downstream 234580 9653904 ~ 9673252 (+)
pank1a LOC103364766,LOC102792137,LOC100705818,LOC106930799,LOC102312257 other downstream 773705 10193029 ~ 10219271 (+)
LOC120547507 NA other downstream 844773 10264097 ~ 10292289 (+)

Expression


Co-expression Network