G192667


Basic Information

Item Value
gene id G192667
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 9487763 ~ 9491128 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU261676
CACAACTATATTGCGCCATTTCATTGTTTCTTTGTTGCTCTGATTTCTTACATAGATCAATtcaatatttaaaagaaaatatttattttaatatttaatttatttatagtttctTTCTACCAatatacacacaataataaaagggTTTAAAGGTTCACTGTACAAAAATACTATTTCTAAAAATATAAGTTACCACTAGCAATAGAAAATGGCTACAATGGCTTCATGGCTATGTCCTTCGGAAGAGGTAGAGAAAACAAGCACACTGTAAATAGGGGCACAACTCCACCCAAATACAAAATTCCTACATCCAATACTGCATTATactgtacaaaaaataaaaaatacacaaaaagaatacacatacacacagctacacagagATTTTCATTctaaaacactcaaaatgtcaTGGTTTAGAGGTGCTGACGCAGAGGAGGTGCACTGCAGTGTCATTGTAAAAGGATAAGGGCTGAAGCAGGCTTTTGACAAGATAGacatattcttcttcttctcttcttgcTGGGTAACAGTAGCTCGTAGATACTCCCAGAGGAGCTGACCTGTACACTTTCAAGAGCTGAAAGATTTCATCAAATTACCAGGGTAACGTTTTGTGGGCAACTGCATTACCTTGTAACTCTTTCAGACAAACAACGACCTAGTCCATCTTGCCTAAGGACTGGGTGGCAGCCCAGTGCACCACTACGTCTCAAGCCAGTCAAGTTTGACTTTAAATGGGTTTGGAGGTGGCAGCAACAACATCAGCAGGACTATTCGGTTAAAAAGAAGTGGTATCTCTCCAGTTATACGGATTTGGTTCGGTTTTGTGAGGATCAGCTTCAAGGTGAAAGTCTTTCACAACTAAAAGTAGCAGCACAATAGGTTGAGAGTAGTAGAGTGGTAGAGTTGGTTTCCTTGTACTGTACACGTTACTGCTTTTTAAAGCAGCTGATGGAAAATgcctgtaataataataataaagtaaattcccttattttatttcatttttaactaTGTGGGCGCTTTTCTTTGGCCATATTGCCTTGCTCTTTGAAAAATACTGTATACCCCACATTTTTAACATTAGAAGCTGCAGATGTCGTGGAAAGCTCAAATACACGTACATAAAGGGAAAATTCTGCTCGGGGCcaatgaaattaaaatgtcaCTAACGCAAGGGCACTTGACTTGGTTGAACTTAGTAATTTCTGGAAATCTTGGAAAGTCATTTTGGAATGAAACATGTAGAAATATCTtcaaaaaacataaacacatctgtaaaacacatactgtagctaaacacacaggcacatgtGCATTCACACATAtggtactgtacatacacataaGCTTAAACACACTTGAGGTTTACCACATGCCACGGCACAgtacattacaaatatttatttcaaaacGTCATTTAATCTGCATTATATAATTAAAACTGTAGGTTGTCGAGAAATGCTACATGTTTCTTTTTAATCTCaataatgtataaataaatgtacCAAATGTATAACcaccataaacaaacaaaaccagtGTAAAAAGACTTCActgcattttaaatgttctgccataGGATCTGATTTGGCAGTAAATCCGATCACTATTTTACGGCAGAAAAGGgttgcattttcttttcaaacagagaaaaaaaacctttagATTTTCCAATAATGGAAAGATTGAAAGACTACAATAAAGCCAAACAGTAAGGTAGAGTGTGTATCTATTGTAGATTCACAGTTTACATGCTTCCTTTTAGCAACAGGAAGCAATACACTAATAGAAACATCAGTACACACTGAATATTTCCAGATGTTCCTCCATCAGACAAACATCTCCTTGTTGACCCACATGAGTGTGCGCGTGTCGTTGGGTTTGCACTCGTACTCGATGCTGTTGAAGCTGTTTCCCCACTGGCAGTGGTCCCTtttgttgtagttgtagtaCTTCACCTGCCACACCGTTTCAAACATCCCGGCCTCTGTGAACTGTATGTTGATTTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU261676 True 2018 lncRNA 0.37 2 9487763 9491128

Neighbor

gene id symbol gene type direction distance location
pno1 pno1 coding upstream 40287 9442876 ~ 9447476 (+)
LOC120547702 LOC101470025,LOC103386883 coding upstream 49853 9421344 ~ 9437910 (+)
LOC120548362 NA coding upstream 153765 9327374 ~ 9333998 (+)
LOC120548133 actr2,LOC104930021,LOC108423375,LOC105008543 coding upstream 539658 8930547 ~ 8948105 (+)
aftphb NA coding upstream 560273 8917425 ~ 8927490 (+)
LOC120548339 NA coding downstream 256180 9747308 ~ 9754782 (+)
mrps5 mrps5 coding downstream 606604 10097732 ~ 10123497 (+)
zgc:65997 LOC101480976,LOC102212345,LOC100706081,LOC104967569,LOC107089893,LOC105937212 coding downstream 691968 10183096 ~ 10187447 (+)
LOC120547607 NA coding downstream 730432 10221560 ~ 10236944 (+)
LOC120547519 vip coding downstream 1037072 10528200 ~ 10534574 (+)
G192634 NA non-coding upstream 37942 9404402 ~ 9449821 (+)
G192633 NA non-coding upstream 68439 9397548 ~ 9419324 (+)
LOC120548135 NA non-coding upstream 429345 8977204 ~ 9058418 (+)
G192530 NA non-coding upstream 582886 8857991 ~ 8904877 (+)
G192464 NA non-coding upstream 1110064 8369378 ~ 8377699 (+)
G192691 LOC104930997,LOC101166076,LOC103372934,LOC102208791 non-coding downstream 143637 9634765 ~ 9638011 (+)
G192692 eef1a1a,LOC103386869,LOC105912050,LOC103476462,LOC106576970 non-coding downstream 147253 9638381 ~ 9640978 (+)
G192713 map4k3 non-coding downstream 187608 9678736 ~ 9680975 (+)
G192733 NA non-coding downstream 276133 9767261 ~ 9772128 (+)
G192734 NA non-coding downstream 312167 9803295 ~ 9803651 (+)
meis1b meis1,LOC101073206,LOC106613898,LOC103387108 other upstream 292347 9114656 ~ 9195416 (+)
bean1 bean1,LOC102779979 other upstream 1368700 8066336 ~ 8119063 (+)
LOC120547751 LOC103371019,LOC107095977 other upstream 2683211 6800514 ~ 6804552 (+)
zc3h15 zc3h15 other upstream 2698677 6775743 ~ 6789086 (+)
LOC120548025 ppp1r1c,LOC106939859 other upstream 2981912 6485581 ~ 6505851 (+)
kcnq5a LOC101074332,LOC101486129 other downstream 5663 9496791 ~ 9602882 (+)
ddx43 ddx43,LOC107693529,LOC107588708 other downstream 115397 9606525 ~ 9624564 (+)
arhgef33 arhgef33,LOC107098984 other downstream 162776 9653904 ~ 9673252 (+)
pank1a LOC103364766,LOC102792137,LOC100705818,LOC106930799,LOC102312257 other downstream 701901 10193029 ~ 10219271 (+)
LOC120547507 NA other downstream 772969 10264097 ~ 10292289 (+)

Expression


Co-expression Network