kcnq5a (LOC101074332,LOC101486129)


Basic Information

Item Value
gene id kcnq5a
gene name LOC101074332,LOC101486129
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 9496791 ~ 9602882 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU261680
GCAGATGGCCAACGTGTCCAAACAGGACTGTGAATATGCTCACACGGCCACGGGATGACAAGATGAGAGCAGATTAGAAATCGAACTCTTCTCCCactgctttgttttatttagtgTCTAGGGAAAGCCAAAGTAGTCAAACACCCTGCGCAAGAGCACTTGGCTCCATATGAATGTCTGTCGGTCTCCCAGCGCACAGCGCTGGTGATGCCATGCCGCGAAGTCACACCGGCGATGAGAGCAGCGGCACTGGGCTCTGGCTGAAGACCCCAACAGGACACCGGGCGCAGGACTACGCACTGAAAGATGTGGAGTCTGGGCAGAGGACGATGAATAACGCGGTGCGGGTCGGGGCCGG
>XM_039784387.1
AATAGAAAATCATAGCAACTTAGATGTCGAGAACACCTACTAACGCAGTGGTTCTGGTACTGCTGGCTGTGCTGCGCGCTTCGCTGTCCGATAAGTAAAAGAGAAGCATGGTTTGGGCAGCACCGGCAGGCTCCACACACTTTGACAGAAAGAAGCAAGACGGCGAGTGAGAGTTGGGGAATAAACGGGAGGTTGGGAGAGCCCTCCCCCTGCCAAATGTCTCGATGGATCCACTCCTTCATAACCCCACTCTTCTCCAGCCTTGCGCAGATGGCCAACGTGTCCAAACAGGACTGTGAATATGCTCACACGGCCACGGGATGACAAGATGAGAGCAGATTAGAAATCGAACTCTTCTCCCactgctttgttttatttagtgTCTAGGGAAAGCCAAAGTAGTCAAACACCCTGCGCAAGAGCACTTGGCTCCATATGAATGTCTGTCGGTCTCCCAGCGCACAGCGCTGGTGATGCCATGCCGCGAAGTCACACCGGCGATGAGAGCAGCGGCACTGGGCTCTGGCTGAAGACCCCAACAGGACACCGGGCGCAGGACTACGCACTGAAAGATGTGGAGTCTGGGCAGAGGACGATGAATAACGCGGTGCGGGTCGGGGCCGGGGCGGGGCCCCCGgcgggcgggggggggggggggaaaaaaagggggggggcccccccccccgggggggggggggggccgctGATCTACAGCGCGCAGAGCGGCCGCAGGAACGCGCGGTACCGGCGGTTCCAGAACTACCTGTACAACGTGTTGGAGAGACCGAGGGAATGGGCTTTCATCTACCACGCTTTTGTGTTCATCCTGGTGTTTGGATGTCTGGTTCTCTCTGTGTTTTCCACCATCCCTGCTCACCAGGATGTCTCCACACACTGCCTGCTCATCCtgGAGTTTGTGATGATTGTAGTGTTTGGTCTGGAGTACATCATCAGGATATGGAGTgctggctgctgctgccgctaCCGAGGCTGGCAAGGACGCCTCCGATTCGCCAGGAAGCCGTTCTGTGTTATAGACATCATCGTACTCATCGCCTCTGTTGCCGTGGTTTCAGCCGGTAGCCAGGGTAACATTTTTGCTACCTCTGCTCTGCGTAGCCTTCGTTTCCTGCAGATCCTGCGCATGGTGCGCATGGACCGCAGGGGAGGGACCTGGAAGTTGCTGGGATCTGTAGTTTATGCACATAGTAAGgAGCTGGTGACTGCCTGGTACATTGGGTTTCTGGTGCTaatcttctcctccttcttggTTTATCTGGTGGAGAAAGAACTCAACCAGGAGTTCGCCACCTACGCTGACGCTCTGTGGTGGGGCACGATCACCCTTACAACCATTGGCTACGGTGACAAGACCCCGCAGACGTGGACCGGACGGTTATTATCAGCTGGTTTTGCTCTGCTGGGGATCTCCTTCTTCGCTCTTCCAGCTGGCATCCTCGGGTCAGGTTTTGCCCTGAAAGTGCAGGAGCAGCATCGACAGAAGCACTTTGAAAAGAGGAGGAACCCAGCTGCCAGCCTCATTcagTGTGTCTGGCGTAGTTATGCTGCTGATGAGAACTCGGTTTCCATTGCTACCTGGAAGCCTCATTTGAAGGCGTTGCATACCTGCAGCCCCGCCAAGAAAGAGCAAGGAGAGACTACTTGCAGTCAGAAGTTGAGTTTTAAGGAGCGGGTCCGGATGGCGAGTCCCCGTGGTCAGAGCATGAAGAGCAGGCAGACGTCCATCAGCGACCGCCAACGCTCTTCCCCTGGCAACGAGGTGGTGGGCGGCGCAGATCTGATGGGTGGCAGCCCTGCCAAAGTGCAGAAGAGCTGGAGCTTCAATGATCGGACCCGGTTTAGGCCGTCACTGAGGCTGAAGAGCCAGACTCGCACTGCTGTCCCAGATGtggACACAGGCATGACCACAGAGGATTCCTTTGATGAGAGAGGCTGCCATTGCGACGTTACAGTGGAAGATCTATCGGCTCCCCTCAAGGCTGTCATCAGAGCTGTCAGgatcaTGAAGTTCCACGTTGCAAAAAAGAAGTTTAAGGAGACGTTGCGTCCGTACGATGTGAAGGATGTCATAGAGCAGTACTCTGCAGGACACTTGGACATGCTCTGTCGCATCAAGAGCCTTCAGACTAGACTAGACACTGTAGTGGGTCCCCCTCCAAAGCCTTTCAGCAGCCGCGTCAAGACCTTATCCTCTCCCTCCCTGCATTTATATTACAGCCAGGCCCGGAGGAAACAGTCTGCACCGGGACTGGCCAGTGCAGCGGGCTCTGGTCCCAGCCTGAGTAGCCGACCAAGGAACATGTCTTCTCCTGCCCTGCACTATTATTACAGCAACCACAGGAAGAAGCTCCCTGGCTCAGGGGTGGATCAGATTCTGGGAAAAGGCCATATTCCTGTGGATAAGAAGATGAGGGACAAACTGCACCCAGATGGAGACTCTCTAGAGAGCATGAGCATGCTGGGACGTGTGTGTAAGGTAGAGAGACAGGTAACTTCCATTGAATCAAAATTGGACTCTTTGCTGGACGTTTACCGCCAAGTCCTACACAAAGGCCCCACAGCACTCACCCTCTCCTCCCTTCCCCTGTTCGAGCTGGACAACCACCAGCATCGCAACTCTGACTACCAGACCTCCATCGTTGGCAGGGATCTACCCTCCCCCCAGAGAGGCGATCCGGCTGGAGGTGGAAGAAATAACAGTGGGGGCATACGTCGTTCTCTTAGCGTCAACCCTAGAGGCCTGCGGCTCATCCTGGCACCCGCTGATGATGACGGCCCCCCAGACTCAGAACCTCCATCCTATCCTCCGTCAACAGCCTCGCTCTCCCCATCACCCCTGCTGCCTCGATATCCAACCTTGCTCACCCCCAACGGTAACTCCAAAAGAGCACACTTTCCTGACCTCCCACCGCCACCTCCCTCAACAGGGGGTTTTACCCTCCGTCTGCCCCCCATGATGCATCCCTCCCACCTCCGATACTCCGCTGACCCCGTCCCAGATGAAATGACAGATGGAGTGCCGGTGGATGAGGGGAGCCTGGGCCCCTCTTTTGTTGTTGGATCCAGTGTCGATGCTGATGAGGAAGGGGACAGCGAGGCAGGCCCTACCCAGGGAAGGGTGCCGCTGCGGGAGAAGACTGGCTTGAAATCTGAGGGGGTTTGGAGGAGGCACATGAGCCTGGAGCTTGAtcccctgctgctgctctcgtcTAGCCCGGAAGAGAAGCCTTCAGACTGGGAAGGCAGTCTTGGAAAATCCCTCTCTGTGAACAATCTCAACCAGCCTTCGACCAACCATGCCCCTGGTCTCGCCTCCGTgctcaacaacagcagcagcagcaatggTAGCAAACGTGGCAATGCCTACGGTGACCTTAGAAACTGGGATGGAACAGAACTCTTCATTAGGGAGTGCAAACTAGAGCCAACAGAAGAACATTTCAACTTACTGTCCCAGGGACCTGACAGCATCCCCTCAGACCTTTTACAGACTGTGGAGGAGGCTGCACCTCACCCCGAGTTTCTCAGTCAGTCCCCACCACACGTACAGCTGGcataactacacacacacacacacataaacacactctctctcacccacacacacacacacacacaaacacacacacacacacttgcatactGTAAGTACAAACCATTGTTGGGGAAGCcacttttaaagtatttttacaCTCTACATATATTGTGTTGGAAATGTCCAATCAATGTTTTCTATATGGACATACAAGGTTTCACATTTTGTCTAACATGATTATATCCACTCATTCATTAtgttaaatactttttatagggtattacaattacttttattaagaataaaagtataaaatatgTATGAAAGTGGGCATATTTACATtagacaaaatacacaaacaatacacaaatACAAGATACCTTCATTTAAGAGAATTTGCTTTGGTCTTTATTTAAAGATATTTAGAGATTCATTTATTAACTTTTTACAAGATCATATATTAATAAAAAGGTTGCTAAAACaaaaattttgtttcaaataaaGAGCAAGAAAGGGATGTTACCTGTGATTTCTGAGCCTAGACTAGACATCGAAGTGTAGAAGCACATCAAATAATTTGGTTCACCACAAAAATATACTGTGAGTAATGTTAACTTTCTTTTCAATGTCATTTCCAGCAGTCTTACATTTTAACTTCTGTCTGATCCTAAACACAAACCAAAGTAGTTTGGGCACATCACTGAAACAAGCAGGAGTGTTTGTTGTAGAAATCGAAGGACATCTGCCTTGTGGCAACCTTGACAATTGAATGATTGAATCAAATCAGAAGGAAATACTGCATGATTGTCTCACAGCCAAAAATAGGTGCAAGTTAGTGTAGTTAAACCTCAAACAAGCCACTGGAAGCTATAGGTCAACCACTTCttccgtacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgcaggcaggcaggcagacagacacatccACAACCAGAGTACTCCAGCCAACTTGAAAAAGAGCTGTGACTCACAAATTACTGTCGAATGGTTTAGTTTTTCATACAATACTTTTCATTCAAATACTTTCTTGGAAGAAGAGGAGATCCAATCACTCTCCTTATTCAATGTCTGTCTTTGGCAATGTAAAATGTCATCATTTTACGAATGCTTTCATACATATCACTGCATGGACTGTATCCGAAAACAAATGAATGAAAGGAGAATTACAGTCTGTGTGAAGCCTGGTATGATGGGAATAGCTcaattcccaaaaaaaaaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K04930 KCNQ5, KV7.5; potassium voltage-gated channel KQT-like subfamily member 5

RNA

RNA id representative length rna type GC content exon number start site end site
TU261680 False 358 lncRNA 0.56 1 9497057 9497414
XM_039784387.1 True 4830 mRNA 0.51 18 9496791 9602882

Neighbor

gene id symbol gene type direction distance location
pno1 pno1 coding upstream 49315 9442876 ~ 9447476 (+)
LOC120547702 LOC101470025,LOC103386883 coding upstream 58881 9421344 ~ 9437910 (+)
LOC120548362 NA coding upstream 162793 9327374 ~ 9333998 (+)
LOC120548133 actr2,LOC104930021,LOC108423375,LOC105008543 coding upstream 548686 8930547 ~ 8948105 (+)
aftphb NA coding upstream 569301 8917425 ~ 8927490 (+)
LOC120548339 NA coding downstream 144426 9747308 ~ 9754782 (+)
mrps5 mrps5 coding downstream 494850 10097732 ~ 10123497 (+)
zgc:65997 LOC101480976,LOC102212345,LOC100706081,LOC104967569,LOC107089893,LOC105937212 coding downstream 580214 10183096 ~ 10187447 (+)
LOC120547607 NA coding downstream 618678 10221560 ~ 10236944 (+)
LOC120547519 vip coding downstream 925318 10528200 ~ 10534574 (+)
G192667 NA non-coding upstream 5663 9487763 ~ 9491128 (+)
G192634 NA non-coding upstream 46970 9404402 ~ 9449821 (+)
G192633 NA non-coding upstream 77467 9397548 ~ 9419324 (+)
LOC120548135 NA non-coding upstream 438373 8977204 ~ 9058418 (+)
G192530 NA non-coding upstream 591914 8857991 ~ 8904877 (+)
G192691 LOC104930997,LOC101166076,LOC103372934,LOC102208791 non-coding downstream 31883 9634765 ~ 9638011 (+)
G192692 eef1a1a,LOC103386869,LOC105912050,LOC103476462,LOC106576970 non-coding downstream 35499 9638381 ~ 9640978 (+)
G192713 map4k3 non-coding downstream 75854 9678736 ~ 9680975 (+)
G192733 NA non-coding downstream 164379 9767261 ~ 9772128 (+)
G192734 NA non-coding downstream 200413 9803295 ~ 9803651 (+)
meis1b meis1,LOC101073206,LOC106613898,LOC103387108 other upstream 301375 9114656 ~ 9195416 (+)
bean1 bean1,LOC102779979 other upstream 1377728 8066336 ~ 8119063 (+)
LOC120547751 LOC103371019,LOC107095977 other upstream 2692239 6800514 ~ 6804552 (+)
zc3h15 zc3h15 other upstream 2707705 6775743 ~ 6789086 (+)
LOC120548025 ppp1r1c,LOC106939859 other upstream 2990940 6485581 ~ 6505851 (+)
ddx43 ddx43,LOC107693529,LOC107588708 other downstream 3643 9606525 ~ 9624564 (+)
arhgef33 arhgef33,LOC107098984 other downstream 51022 9653904 ~ 9673252 (+)
pank1a LOC103364766,LOC102792137,LOC100705818,LOC106930799,LOC102312257 other downstream 590147 10193029 ~ 10219271 (+)
LOC120547507 NA other downstream 661215 10264097 ~ 10292289 (+)
LOC120547509 NA other downstream 712064 10314946 ~ 10323760 (+)

Expression


Co-expression Network