G192821


Basic Information

Item Value
gene id G192821
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 10354551 ~ 10356115 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU261878
CAGGCAAGGTATATTATCTGCAACACAAAGAGGAAGAACAAATGAATTTAGTCATCAGAGGATGTTTAGTATAGGAGAAAACCTGTAAATACAcagttataaaaacaaaataacagcaTACTGTACTTGAGCCTATTAAGAACTGATAACTGAACCAACTTGTTCAAACAGAGAATACGTTTCATTTTTCCGTATGGCTATACACCTGAGAGTtgagcattttctttttttaacctttattttatcATAATTGTATTACTATGTATATTTTGGctgtacatttatttgttttctaaTTATTTCCATGTTATATTTGACTTAGGTAGATTTGAGTCAGGTGGAACTAATTTGGTTTTCTAAAGACAAtgaaaaacataagaaaagGGAAGTAAGGTATACCAGAGAAATGAAACTAAACAGAACCTTTCATAAATGTATTTCTATTCATTATATTTTCTATTATTCTTTCAAGTcagtagttgtgtgtgtttcttgtgtcTTACTGCTCCTATGTGTCTGCTAGTGCCAATCTCCCTGCCAAACCTAGTGAATTTAATGAACAAAGAACTGAAGCTTGTAAGATATTTTGGCTTTTGATTTCTTAGATAGTAAATCAAGACTAGCAACATAGATTCCTCACGCAAGGAAAGGTTACATGCAAGGTTTCAGCACTAACTCATTTATTTCAAGTTAACAAAGTATAAAGCTGCCGTGAACCCAAATTACAAGAAAAAGGACAGAGCTGCCAATAAAAACTTATAAATCTTTAGTGATCATCGTTTAAAATAAATCATTAGTGATTATCACTCAACATATTATTATAGAACAGTTTATGGTTGTGAAAAAGTGTTTCACAATTTATACACAATATTAAtgtaagaaataaaatgatattaCAGTCTATTTGATTAGATTTTATCCCAACTTATTTTAGTCCCTTTCACTGAAAGTCTATAGATGCCTGCAAATCactaaaatattaataattcaacactttcaaatgttttctttttcagctTGTCTCTTCATGatatgtactgtgtgtatgtatgtatgtatgtatgtatatatatatatatatataaaaataaaatagtacTAATTCACGTATGTGTTACTTGCTGTGTTCACCACCAGCTGGGATTTTAACAGTATCTGCAGGACTTCACTGGCTCTGGGGATTTTGAGCCAAAACAGCCCACAAGCGAAactaaaagaaaaggaaagagttTGGAAAGCCAGCTAACCTCAGCACCTGGACAATTACAGACGCTATCGACCTCCTGCAGGTGTTTTATGGTCATCTGGTGCAATGCGACAATAAAAATCTTACTTACTGCCCTTGCAAACCTCTTGAATTTGTTCTTGCTTTCAACATTTGAGCAAATTATTTCCTGAGGCAACTCCACcgcacaatgtttttttttgccaagaaCCAGCAGCTGCAAACAAGGACATTCAGCACCAAGTCTTCTGTCGCTGCCTGTGGTCACCACTCAGCAGCCGCCCCATCTCATGACGATGATGTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU261878 True 1531 lncRNA 0.34 2 10354551 10356115

Neighbor

gene id symbol gene type direction distance location
LOC120547607 NA coding upstream 117607 10221560 ~ 10236944 (+)
zgc:65997 LOC101480976,LOC102212345,LOC100706081,LOC104967569,LOC107089893,LOC105937212 coding upstream 167104 10183096 ~ 10187447 (+)
mrps5 mrps5 coding upstream 231054 10097732 ~ 10123497 (+)
LOC120548339 NA coding upstream 599769 9747308 ~ 9754782 (+)
pno1 pno1 coding upstream 907075 9442876 ~ 9447476 (+)
LOC120547519 vip coding downstream 172085 10528200 ~ 10534574 (+)
mtrf1l mtrf1l,LOC106904956,LOC103137471 coding downstream 195377 10551492 ~ 10557691 (+)
desi2 desi2,LOC101155051,LOC107089908 coding downstream 202446 10558561 ~ 10579945 (+)
kcnh1a kcnh1 coding downstream 236670 10592785 ~ 10632920 (+)
si:dkey-174i8.1 LOC104941281,LOC100697478 coding downstream 325146 10681261 ~ 10691085 (+)
G192771 NA non-coding upstream 115892 10236971 ~ 10238659 (+)
G192773 NA non-coding upstream 124653 10229462 ~ 10229898 (+)
G192772 NA non-coding upstream 125888 10228120 ~ 10228663 (+)
G192755 NA non-coding upstream 221319 10132536 ~ 10133232 (+)
G192751 NA non-coding upstream 230280 10123772 ~ 10124271 (+)
G192900 NA non-coding downstream 410916 10767031 ~ 10768054 (+)
G192940 NA non-coding downstream 582244 10938359 ~ 10996645 (+)
G192942 NA non-coding downstream 603099 10959214 ~ 10962849 (+)
G192945 NA non-coding downstream 662025 11018140 ~ 11018931 (+)
G192997 six3,six3a,LOC104943435,LOC107711438,LOC107733790 non-coding downstream 778965 11135080 ~ 11139366 (+)
LOC120547509 NA other upstream 30791 10314946 ~ 10323760 (+)
LOC120547507 NA other upstream 62262 10264097 ~ 10292289 (+)
pank1a LOC103364766,LOC102792137,LOC100705818,LOC106930799,LOC102312257 other upstream 135280 10193029 ~ 10219271 (+)
arhgef33 arhgef33,LOC107098984 other upstream 681299 9653904 ~ 9673252 (+)
ddx43 ddx43,LOC107693529,LOC107588708 other upstream 729987 9606525 ~ 9624564 (+)
G192834 NA other downstream 85412 10441527 ~ 10442085 (+)
mrpl57 mrpl57 other downstream 230663 10586778 ~ 10591293 (+)
LOC120548129 LOC107375852 other downstream 596938 10953053 ~ 10956622 (+)
G192994 NA other downstream 794204 11150319 ~ 11152241 (+)
prepl prepl,slc3a1 other downstream 1000925 11357040 ~ 11368623 (+)

Expression


Co-expression Network