G193041


Basic Information

Item Value
gene id G193041
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 11383093 ~ 11386325 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU262150
TCCCTTATcattgcctgtgtgtgtgtgtgtgtgtgtgtgtgtttgaccaaGGTAATTTAATACCAACCACTCCTAAACACCATCTCAGAGCTATGCTATAGGTGCTGACTATATATCATTTTTGGCAGCTTAGGACACACACGTGGGCTGGTCGTAAGAGGGCTTCATCAGCTTGGGATGCCCAAAAAGAGGGCTAAACGTCTAGCAAAGTACCGtgctctgctctgtctgctatCATAGGCAGCCGCCATATATGGCGAAGACACTGTTACTTATACCCGTGAGAAAGGAAGGATATGCTTAATATTATGAAGACCTGCTGTATGCCAATGGCCCATGattttgtatatgtatttaaCTGCATCAATAATATTTATGTCCCTGTAAATTATTTCCTTCAAGTGGACTTAAATAAAAGTGTGTCCATTTGCTAACTATATTTTTGAAGAGTGGAACCATTCCACTATTTGTGCTGCTATGATAAAATATTGTAttaaaagttggaaaaaagacatttgggatttgttttagGTTAAAAAGGTGACATCAGTTATTTTCTAGCTTTTTGCACTAAATATATCAACAGGGTTTGTCGTTCACTCCTGTCTTGCTACTCTTCGAACCCCGTCGCTCATTAGTTGGTGGATTATTTTATAGACATGGGGTTTGGGTCAAGGTATGATGTACAAGTACTGCAATGAAGCTAACAATAACTACAGGAGGTGGCGTTTTTTGTCATATATTAGAGCAAATAAACTAATATTTGTCGTCGTTGCGGTTTGTCAGTTAAAAcaggaataaaataaatactgtttATAAAACGTGAAAGGTGAGTAATTCAAACTTCAGGTTTTCCGGCTAGTTGTAGTAGTGTAGCACTACTTTATCCGAGTCAGTTTGCAGCCATACCTGCCAGTGTAAAATTTAGTAATGATGGACAGATAAACTAAATACTTTTATTAGGACATGCAGCCTtttccttacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaaatcaggcTCTACCTCAGGACTTTTGTCCATCATtagcagacacaaacagacacaagaaTACACCAGACATAACAGCTAACAAACAAGTGGACAGAGCTGAATGACACTGCAGCGCTATCGACGATCATAGTGGCATCTCAGAGTGTTATTCCCCCACAGAAACATCTCCATCATTTAAaaacccatacacacactcacatgtaACCACCCATCCactgcaacaacacacacagttgtcATTGACTCCCAGTTTTCAAGCCATTATGTCAGAAATGGCATCTTTCTGTAAAACTTGCTGGCAAGTAAAGATCTCTGCAAAACACAAGAGTATATTTCCACATCTGTGGGCAAGACTACATCCTTagggcattttcacacctgtagtttgtttgctttggtccaAATCAGCtggtgagtttgtaaacttggagcaaTTTGCCCTTGGTTCGGTTTGAAAAATCTAAGCGTACCAAAACACGCCATTACAAACCATGCAAGGTCGTCcactcctcttattggtcggatgtgtCTGGGGGTGGGATCAAGAAAGTCAATGGAAGGAAGAacgtcctgtgttctggactagtgcatatttcttgcatctccataaaaccagctcatttcattaaaatgatcaGGCAGTGTTTCGCGAGAGACTTTACTACACctgctctggtcaccgagactttgctctgctctgccggcgTCTGTCTCCAATTTTAGCTGCAGcaggtttgaccacggagatgcgaGTGACGGACGCCGAGCTTGAccgcagtctatttctgtgagagaaacactgcaagctgctacagtttgctgctctaccgcatcgcagattgctaaacacacctgactacaggagacattagctgAGACTTGCGGAGTATGTATAGTGTACGAATCATATTCTCACCAAaaacgaaccgctccagagtttgATTAAAAGCgcaccgagaccacctcttcaagcagttctcggtacgcttgtttggtccgctttttGAATGCCGCGTTCTCACCTGCCCTGGCGAACCGCACCAGCGGGACAAACTCTCTAGAGACTCTAGAGCGATTCAACCGAACTGcacgaggcaggtgtgaaaacgtCACAGTTGTTCCATACAGACTCCTTAGTGCCATACATTCTCAAATAGTGGCCACAGCTTTTATTCACCACAACTAAATAGAGAACTAGGCCTTTATGTGAAACAGGATATAATAAGAAACATACCTTTACTTTTTATTTCCAATGTTATGAgtatactttttttgttgtgtgttcacAACAAACATACAGTAGTTGCATGCGACAAAGGTAAACAGCTAACAGAAAAAAGACAAACTGAAGATGGATATGTTGGTCTCTGGAACATACTGAGAATAGGGACAGACAGAAAAGAATCAATACTGCAGCAATGATTTGAAAATTATGTTAGGGCATTTTGATACTTTGTTTGCATTGAAATTGGCACTTTTCAGACCTACACAAACGTGAGCGTTTGAAACTTGAAAAAGGTTTTCAGTTAAGAATCTCTCTGCAATCACTCGCTCCTAGTGTTGCACTAAATCTGTGCATTATATTGGTATTTggtagtgatgcaccgaaatgaaaattcttggcagaaaccgaaaaaaagaggaaaccaagaccgaaaaccaaaaccgaaacaccgaaagaaattaagccaattattagtacaatctgatagtcacatacagtatatagtaccctaagaacagaatagcttacctatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262150 True 2898 lncRNA 0.41 2 11383093 11386325

Neighbor

gene id symbol gene type direction distance location
six2a six2 coding upstream 268288 11111368 ~ 11114805 (+)
srbd1 srbd1,LOC102778372 coding upstream 365076 10965298 ~ 11018017 (+)
LOC120548125 ppp4r3b coding upstream 510653 10861935 ~ 10872440 (+)
LOC120548124 pnpt1 coding upstream 523542 10848185 ~ 10859551 (+)
camk2g2 LOC102311605,LOC101480272,LOC100707324,LOC102797899,LOC103476425,LOC103386999,LOC107089901,LOC103137428,LOC106959359 coding upstream 617962 10701254 ~ 10765131 (+)
znhit2 NA coding downstream 44973 11431298 ~ 11433996 (+)
lrpprc lrpprc,LOC102780371 coding downstream 48275 11434600 ~ 11492318 (+)
abcg5 abcg5 coding downstream 121770 11508095 ~ 11518919 (+)
hint1 hint1,LOC102782004 coding downstream 140992 11527317 ~ 11529227 (+)
LOC120547549 tmem26 coding downstream 283048 11669373 ~ 11679111 (+)
G192995 NA non-coding upstream 232885 11146804 ~ 11150208 (+)
G192997 six3,six3a,LOC104943435,LOC107711438,LOC107733790 non-coding upstream 243727 11135080 ~ 11139366 (+)
G192945 NA non-coding upstream 364162 11018140 ~ 11018931 (+)
G192940 NA non-coding upstream 386448 10938359 ~ 10996645 (+)
G192942 NA non-coding upstream 420244 10959214 ~ 10962849 (+)
G193047 NA non-coding downstream 7769 11394094 ~ 11419102 (+)
G193161 NA non-coding downstream 328891 11715216 ~ 11715850 (+)
G193172 LOC107099926,LOC104931217,LOC103370571 non-coding downstream 400088 11786413 ~ 11791957 (+)
G193213 NA non-coding downstream 600949 11987274 ~ 11991708 (+)
LOC120548033 NA non-coding downstream 621310 12007635 ~ 12017653 (+)
prepl prepl,slc3a1 other upstream 14470 11357040 ~ 11368623 (+)
G192994 NA other upstream 230852 11150319 ~ 11152241 (+)
LOC120548129 LOC107375852 other upstream 426471 10953053 ~ 10956622 (+)
mrpl57 mrpl57 other upstream 791800 10586778 ~ 10591293 (+)
G192834 NA other upstream 941008 10441527 ~ 10442085 (+)
rtkn2a rtkn2,LOC102197450,LOC101474298 other downstream 188073 11574398 ~ 11584172 (+)
sdccag8 sdccag8 other downstream 331568 11717893 ~ 11790539 (+)
zbtb18 zbtb18,LOC102787611 other downstream 470662 11856987 ~ 11891203 (+)
oprm1 LOC104946549,LOC106536872,LOC107375811 other downstream 860626 12246951 ~ 12278375 (+)
sf3b5 sf3b5 other downstream 900688 12287013 ~ 12290530 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location