G193661


Basic Information

Item Value
gene id G193661
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 13752743 ~ 13754796 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU262975
tgattattttttgttttaaccaAATCCTTTGGTTTGCACTAGAATTAGTAATAAGTCTGAGCCTTTTTGGCCCATGCATCTCATTCACCACTGGAACGATCTTTATCACTACTGGACTGAATCTATGTGAACGCCACACAAATTATTGCTGTTCAGATATTAAAAATTGAAGGCATTTATACTCTGGAGAGGGGGAAGATAGTGCAGTAAAAAACGAGGGAGGGGtggagatgaagagagagagacagatttttgtttttagagaGAGGAAATCTGAGGACGACTGAGAAACAGAGGAAGGTGGATGGTTGCTAAAGAGCAGCAATTAGGTGATGAATTATTCATGTTGTCTTTTCTAACCAGAGAAATGTAAGCAGAACCCATAAACATATTAGAATTCATTCAGTTAAAACATAATTGACGATTTGATGCACAAGCTTCAATTAAACGtcttcaaaatacaattattgtACATCTATCTCGTCCagcctttatttaaaaaaaaatctttaaaatgttttaaccaAAGTATCATCTTCATCACCAACACCTTATTAAGTGCCTCCTTCTctgatttatgtttttgttcagTGGTAGTAGAGCTATGATCAATGTAGACAGTCCTTTTAAACACACATGgtgctgtttttatttcttaatctattgaaatctctagaaaaaaaagggaatttctttttttaaattaaaaggtTTAATCAATCATTCAATGTGATTTAACCGCTCGGCTCAGGCCACTtcacaaacctttttttttttttggattaaaATGATAGTCAGTCCTTTCTCTGAGGGTTTTCACTCTGTACACAACTAACTTGCAATTTGGCTCTATCAGTCAATCGAACATGGACATACGTTGTGTTAAAGGATAAGTTCACATTTTTTCAGGTCTTTCTTAAAACAACATGGCCATAAGTGTGTCAATGCGAGAGTTATTGGTTGATGCAAGTGTTCCTCAAGAGATCCCTgcttaaaacattttcaaaaagacaGTAACTTTTAGTATTAGCTTATAGTAACTTTGGCTGAACTCATTAACTGCACGAAATAAGTGGACGTAGCCACCGTGACGTcgcccattggtttgtggactatTGTTCTGAAGCCTCGAGTTTGGCATTTTGGCCATCGCCGTCTTGGTTTATTGGAGCTAGAAGTGATCATATTTGGATGAGAGGGTGGAGCCAAGttatcagctagcgctagctaggtGCATCCATAATTCATGTAAGTGTGATATTAATTGGGTTGCTAATTTAGGGTTAGTGTCTTTTAGTAAtggtagtaataataataataatacatgcaGGTTAAAGGCATTGGCTTCTCTTTTCAGGCCCGGATGCGACGTCCATTTCTTTTATGCAGTCTATGGTTGAACTTTAGAATGCATTTTTCCACAGAACAGGGATTTTGTCCCGCATCGCTTGCATTGAAATCATTCTTGGAACGGATCTTGTCACTGTCAGTATGGACGAGAGGAACAATCGCATCCTTTAAAAACTCCTTTAGTCTACATATTGACATGAGAGTAGGCCTACTGTTTTAAGACAGACTTGAAAAAATGTGATGTGCACTTAAATGTCCATTTTGATGGTGTGATTTAGCTTGCGTCTATAACTGTATTTGTTCATTCACTGCAGGTAGCATCAAGATAATATAGCACTGTAATGTATCATGGTAAATCTGACTATTTATTTGATTGTGTAGAAGTGGGGCTTGTATTAGATCAACCGTCTTTCTCCCCAGCAAAAATGCCTTAATGTAAATATATGCACTGTAAATAACTGTTGATTATTCTTCctcttttgttattattttgtacACAAAAGGGCAAAAAGAGGAAAATGCCCTGCATCCAAAAATAtttgagcctttttttttttcttaagttttgttttcttgtcaAAGATATTTTGATGCCATTGTTTTATATATTGTCCTTCCAACAACTTATTTTGTAGATTTGATTTCTTC
>TU262976
GGGTTTTCACTCTGTACACAACTAACTTGCAATTTGGCTCTATCAGTCAATCGAACATGGACATACGTTGTGTTAAAGGATAAGTTCACATTTTTTCAGGTCTTTCTTAAAACAACATGGCCATAAGTGTGTCAATGCGAGAGTTATTGGTTGATGCAAGTGTTCCTCAAGAGATCCCTgcttaaaacattttcaaaaagacaGTAACTTTTAGTATTAGCTTATAGTAACTTTGGCTGAACTCATTAACTGCACGAAATAAGTGGACGTAGCCACCGTGACGTcgcccattggtttgtggactatTGTTCTGAAGCCTCGAGTTTGGCATTTTGGCCATCGCCGTCTTGGTTTATTGGAGCTAGAAGTGATCATATTTGGATGAGAGGGTGGAGCCAAGttatcagctagcgctagctaggtGCATCCATAATTCATGTAAGTGTGATATTAATTGGGTTGCTAATTTAGGGTTAGTGTCTTTTAGTAAtggtagtaataataataataatacatgcaGGTTAAAGGCATTGGCTTCTCTTTTCAGGCCCGGATGCGACGTCCATTTCTTTTATGCAGTCTATGGTTGAACTTTAGAATGCATTTTTCCACAGAACAGGGATTTTGTCCCGCATCGCTTGCATTGAAATCATTCTTGGAACGGATCTTGTCACTGTCAGTATGGACGAGAGGAACAATCGCATCCTTTAAAAACTCCTTTAGTCTACATATTGACATGAGAGTAGGCCTACTGTTTTAAGACAGACTTGAAAAAATGTGATGTGCACTTAAATGTCCATTTTGATGGTGTGATTTAGCTTGCGTCTATAACTGTATTTGTTCATTCACTGCAGGTAGCATCAAGATAATATAGCACTGTAATGTATCATGGTAAATCTGACTATTTATTTGATTGTGTAGAAGTGGGGCTTGTATTAGATCAACCGTCTTTCTCCCCAGCAAAAATGCCTTAATGTAAATATATGCACTGTAAATAACTGTTGATTATTCTTCctcttttgttattattttgtacACAAAAGGGCAAAAAGAGGAAAATGCCCTGCATCCAAAAATAtttgagcctttttttttttcttaagttttgttttcttgtcaAAGATATTTTGATGCCATTGTTTTATATATTGTCCTTCCAACAACTTATTTTGTAGATTTGATTTCTTCCTAGGTAAACGTTCCAAagacaaaagttgttttttcttcaactGAGTGAAACCGAT

Function

GO: NA

KEGG:

id description
ko01051 Biosynthesis of ansamycins

RNA

RNA id representative length rna type GC content exon number start site end site
TU262975 True 1998 lncRNA 0.36 1 13752743 13754740
TU262976 False 1244 lncRNA 0.37 1 13753553 13754796

Neighbor

gene id symbol gene type direction distance location
klf5a klf5 coding upstream 66 13744573 ~ 13752677 (+)
pibf1 pibf1 coding upstream 9092 13721815 ~ 13743651 (+)
bora bora coding upstream 40752 13707961 ~ 13711991 (+)
LOC120547975 phyhipl,LOC102798586 coding upstream 304764 13423558 ~ 13447979 (+)
LOC120548138 bicc1 coding upstream 336808 13342823 ~ 13415935 (+)
cog2 cog2 coding downstream 45450 13800246 ~ 13809894 (+)
cuzd1.2 NA coding downstream 63843 13818639 ~ 13827297 (+)
hmx3a LOC100699350,LOC103364005,LOC102290348,LOC101473229,LOC102196513 coding downstream 76757 13831553 ~ 13855767 (+)
hmx2 hmx2 coding downstream 106304 13861100 ~ 13863306 (+)
LOC120547617 LOC104928877,LOC103364007,LOC104955506,LOC102779318,LOC101473811 coding downstream 209504 13964300 ~ 13970572 (+)
G193395 NA non-coding upstream 819889 12857800 ~ 12932854 (+)
G193393 NA non-coding upstream 908363 12844072 ~ 12844380 (+)
G193392 NA non-coding upstream 985269 12767268 ~ 12767474 (+)
G193373 NA non-coding upstream 1286930 12465597 ~ 12465813 (+)
G193296 NA non-coding upstream 1571790 12178791 ~ 12180953 (+)
G193701 NA non-coding downstream 191277 13946073 ~ 13946351 (+)
G193709 NA non-coding downstream 216994 13971790 ~ 13972115 (+)
G193837 NA non-coding downstream 754803 14509599 ~ 14510920 (+)
G193847 NA non-coding downstream 936555 14691351 ~ 14692096 (+)
G193902 NA non-coding downstream 1064054 14818850 ~ 14820963 (+)
chrm3a LOC101465548 other upstream 543533 13123018 ~ 13209210 (+)
LOC120548560 plekha1,LOC103359314,LOC101483871,LOC102289782,LOC102791929,LOC104931082 other upstream 1379472 12351323 ~ 12373271 (+)
sf3b5 sf3b5 other upstream 1462213 12287013 ~ 12290530 (+)
oprm1 LOC104946549,LOC106536872,LOC107375811 other upstream 1474368 12246951 ~ 12278375 (+)
zbtb18 zbtb18,LOC102787611 other upstream 1861540 11856987 ~ 11891203 (+)
G193730 mettl10 other downstream 319846 14074642 ~ 14076457 (+)
zgc:91976 sgms1 other downstream 1455043 15209839 ~ 15233875 (+)
LOC120548468 NA other downstream 2040174 15794970 ~ 15803515 (+)
lrmda clg13h10orf11,LOC102312243,LOC101474007,LOC106515339,LOC102208092 other downstream 2157966 15912762 ~ 16129667 (+)
G194185 NA other downstream 2598395 16353191 ~ 16353831 (+)

Expression


Co-expression Network