LOC120547519 (vip)


Basic Information

Item Value
gene id LOC120547519
gene name vip
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 10528200 ~ 10534574 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782953.1
TTCTCCTCGTGCTCCATGGGAAACATCCAGGTGTATAAAACGGGAGCAGAGCTGAAGGCGAACAGAAAGAGAGTCAAGAAACATCGGGTCAACAGAGTGGAGATACAACAGCGGCTCGAGATCAGGACTTTGGAAAGCGCAGCGGACAGAACAAAAAGCAGGCAACTTTCTCTAGACCACATGTGTAAAGCGATGTTACAACGGACCGGCCCCCAGCTGCTGTTCCTAATAGCCCTGTGCAGTGTGCTGTACTCCCGGACTCTGAGTCTGCCATACACATCCATGAGACCGACGAGACACGCAGACGGTCTGTTCACCAGCGGATACAGCAAACTCCTCGGACAGCTTTCAGCGCGGAGGTACCTGGAGTCACTGATCGGAAAACGGGTCAGtGACGAGCTGATGGAGGAGCCAGTAAAGCGCCACTCAGACGCCATTTTCTCAGACAACTACAGTCGCTTCCGCAAACAGATGGCTGTCAAGAAGTACCTGAATTCAGTCTTAACAGGAAAGAGAAGCCTAGAAGATGCTGGAAACAGCGACCTGGAGGAGTCCAGGAACGAACCCAACAACTTCCAGGAGAGCTACGATGACATCAACGTAGATCACCTCCTCAACAACTTTCATCTGCCACTTTGAGGAGGGGCCTGCGCTCGAGTGAAAACCTCAAGTCATCCTCATGAAACGGCTCATTCCAAAACCAACACAGTATTAATCCAAAGGACACTCGAAAGTCAAATCAGCCAATGATGATGTGTTCTCCAATGTGGTTATCTATCTATTCATCCACACAGTTCATgtttacactgtatatatacagtatatatactataatatatagaCTCTTCGGGCAGCACTGGGCAACATGCGTGTCCACGTGCACTTTGATCAATCAGCATTTGAAAATAGCAACTGGCAACAATAAAATAGAAGTACCACATTTACTTTCTTTCTAAGACCACTGTTGTTCCATTAACTTTCAATGGAACCATTTCTCTCCTAACAACTTTTTAAAGGAACCACTGTCCTATTCAAGTTGAGTGAAATTTGTCCCATCAACTTTCAGTTATGTAAACATTTGACCCATTGAATGTCAATAGAACAGCATTTACTTTCAGTAGTGTACCTTTCCCATTGGTTTTCAGTGGATCTACTGTAACTTTAGCTTTAAGTGGACAATGTTTGTTCCGATAACTTTGAATGGAAAATATGTCTGATTGAATTCTCATGAATTTTCACTCACAAAAATGTTCCATTAACTTTCAATAGATAATGTTTCCAACTTATCTTCAGTGGAACGCTAGAACATTTGACTTTCAGTATCACTTCCTTGCTTAAATTTAAGTGGAACAAACTGTAACTTCAACTGAACCATTGCTCTATTTACATTTAGTAAGAACACTTACAATCACTCTCTTTACACTCACTTAAAATGGAATTCAGTGGAACATTtgtcacattttgtttcaagATTAAACTTGTAATGGAACCATTTTACTGAGTAACTGTACTGTGTAATGGGACTACTGCCCTATTCAATTTGAGTGACTTTCAATAGAAAAACCACCCCTTTTGAAATTCAGTGGATCTTTAGCTTTAAGTGACCAATGCTTGTGGAACATCTGTGTGATTTAATTCTGACTCACTTTCACTAACCAATATTTCCATTAACTTTCAATAGAGCACTTGTACGGTTAATCTTCAATGGGACACTAGCACCATTAGCTTTCAGTGAAATCACTGATTTATATAAATTTCAATAGAATATTtgtcacattttgtttcaagtttattactattactactattactattaaATTTCAATGGAAATATTTCTCCCAATAAAGTTTTACGGAACAAGTGTTCCATTGAATTAAAAGTGAAATTTATCCCATTAACTTTCAGTTGAACATTTGACCTGTTGAACGTCAATGGAACAGATATAGTTTTCATTTATCTATTTTGTTTTCAGTGTAACTACTATCCTGTTAGCTTTCAGTGAAACATATGTCCATTTAACTCTAAATGAAACATCTGATTGGATTCTGATTCATGTTTGCTAACCAATAGTTCCATCATCTTTCAATAGAGAACTCTAGCACCATTGGCTTTCAGTGGAATCACTGCTTTATAAAAAATTCAGTTGGCCCATTTACCTTTAATTGAACAATAGTTGCATAAAATTACAATTAAACTCAAAACTCAATTTATGCATTCATTTATGTTGTTTCATTAGGATGCAAGCCTTCCATAGATGCTTTGTTCTATTACACATGGGACAATAAATTGGAAAGTTTCATCATCTGTTGTGTTAAATTCAAATTAACAGTTGTCCCATTCATTTCCAATGGTGCAATCATGATCTATGTGCTGACCGAATTGCTTTAGAGAATCAAATATGGTCATTTAATGATAAAAAGAGATACAGGATCAAGAGCAAGAGGAACACACAAATGGACACAGATGCATATAATCACTTTATACTATTCAATATGTAGAGCAAATACATTATAACTGAGCATAGCCCTGCCTTTAGCACATATAGTGATGTACACCACTCACCAAATAAaagatgttgttttatttttcagagCTGA

Function

symbol description
vip Enables hormone activity. Acts upstream of or within adenylate cyclase-modulating G protein-coupled receptor signaling pathway and phospholipase C-activating G protein-coupled receptor signaling pathway. Predicted to be located in extracellular region. Predicted to be active in neuron projection and perikaryon. Is expressed in several structures, including brain; eye; gut; heart; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in pulmonary sarcoidosis. Orthologous to human VIP (vasoactive intestinal peptide).

NR:

description
PREDICTED: VIP peptides

GO: NA

KEGG:

id description
K05264 VIP; vasoactive intestinal peptide

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782953.1 True 2597 mRNA 0.38 6 10528200 10534574

Neighbor

gene id symbol gene type direction distance location
LOC120547607 NA coding upstream 291256 10221560 ~ 10236944 (+)
zgc:65997 LOC101480976,LOC102212345,LOC100706081,LOC104967569,LOC107089893,LOC105937212 coding upstream 340753 10183096 ~ 10187447 (+)
mrps5 mrps5 coding upstream 404703 10097732 ~ 10123497 (+)
LOC120548339 NA coding upstream 773418 9747308 ~ 9754782 (+)
pno1 pno1 coding upstream 1080724 9442876 ~ 9447476 (+)
mtrf1l mtrf1l,LOC106904956,LOC103137471 coding downstream 16918 10551492 ~ 10557691 (+)
desi2 desi2,LOC101155051,LOC107089908 coding downstream 23987 10558561 ~ 10579945 (+)
kcnh1a kcnh1 coding downstream 58211 10592785 ~ 10632920 (+)
si:dkey-174i8.1 LOC104941281,LOC100697478 coding downstream 146687 10681261 ~ 10691085 (+)
camk2g2 LOC102311605,LOC101480272,LOC100707324,LOC102797899,LOC103476425,LOC103386999,LOC107089901,LOC103137428,LOC106959359 coding downstream 166680 10701254 ~ 10765131 (+)
G192821 NA non-coding upstream 172085 10354551 ~ 10356115 (+)
G192771 NA non-coding upstream 289541 10236971 ~ 10238659 (+)
G192773 NA non-coding upstream 298302 10229462 ~ 10229898 (+)
G192772 NA non-coding upstream 299537 10228120 ~ 10228663 (+)
G192755 NA non-coding upstream 394968 10132536 ~ 10133232 (+)
G192900 NA non-coding downstream 232457 10767031 ~ 10768054 (+)
G192940 NA non-coding downstream 403785 10938359 ~ 10996645 (+)
G192942 NA non-coding downstream 424640 10959214 ~ 10962849 (+)
G192945 NA non-coding downstream 483566 11018140 ~ 11018931 (+)
G192997 six3,six3a,LOC104943435,LOC107711438,LOC107733790 non-coding downstream 600506 11135080 ~ 11139366 (+)
G192834 NA other upstream 86115 10441527 ~ 10442085 (+)
LOC120547509 NA other upstream 204440 10314946 ~ 10323760 (+)
LOC120547507 NA other upstream 235911 10264097 ~ 10292289 (+)
pank1a LOC103364766,LOC102792137,LOC100705818,LOC106930799,LOC102312257 other upstream 308929 10193029 ~ 10219271 (+)
arhgef33 arhgef33,LOC107098984 other upstream 854948 9653904 ~ 9673252 (+)
mrpl57 mrpl57 other downstream 52204 10586778 ~ 10591293 (+)
LOC120548129 LOC107375852 other downstream 418479 10953053 ~ 10956622 (+)
G192994 NA other downstream 615745 11150319 ~ 11152241 (+)
prepl prepl,slc3a1 other downstream 822466 11357040 ~ 11368623 (+)
rtkn2a rtkn2,LOC102197450,LOC101474298 other downstream 1039824 11574398 ~ 11584172 (+)

Expression


Co-expression Network