ndnfl (LOC104964611,LOC102076914,LOC102303901,LOC102209898,LOC102795524)


Basic Information

Item Value
gene id ndnfl
gene name LOC104964611,LOC102076914,LOC102303901,LOC102209898,LOC102795524
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 12935352 ~ 12944733 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039783018.1
CTCACCCACTCGCTCCCTCAATATCAGATTGCACAttcagatacacaaacacacacaatcacacatgagCCCATTTGAATTGCAAGTGAGCTCTGTTCACTACCAGAGGAGGTAAACAGAGGGAACAAGTGAAAAGAAcagaagggggaaaaaagagtgacagaggggagaaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagggggACTCAGGCTTCACTGACCGGATGACATTCACAGTTTTTAGCAGGACAAGCCTCCACGTGTGAAGGActaagagacagagagtgaggaGAGTGCCTGGGGAGCTTTGCATCACACCAGGGCACATAGGAGCTGGGACAGCCCTGAAGGGACACCAGAGCCCTGAAGGGACACCTCCTGAAGTAGGGATTGAGCAGCACCCCATGGGAGACGGAGTCAGAGGAACACCCGATAGCAACCTGCTGTCGCTCCTCCTCTCCTCGCGACCGGCTCTCatccccttctcctcctcctcctcctcctcctcctcctcctccatcctcgctcccTCACTCATTTGATCCCATCCCTCACTTCCTgcgcaggagagggagagcgtGCATTGAGAGAAGAGCCTGGGAGATATCCAAGACGTGGCGACTGAGGAAAGTCaaagagtgaaagagacagacagcaagAACCAGCAATGGCACTCATGTCCCTGTCGTGGTGTCTCAGTGCAGCTTTGGCActgttttgtgtttcttcatGGACCCAGGTCCACTCCGCCCTGGCACCTGAGAATGAGGTGCCACTTCGCCCAACTACATGGTTCCCAGAAGGAAAGATCACCTCTGTAACTCTCCCCAAAGGACGGACTCGCAGGCTTTACTTCACACTAAAGAAGAAGGTTCCGGCGATGTCGGTGACTGTCAGCCCCTGTGACCTCCCCATCGAATGGAGCTTGTCAGCCCGCACCCTGAAGGACAAACCCCTCAAGAGCCTGCAGTGGAGCACCAAAAAGAGTATGCCCGAGGTGTGGTGGCGAGGTCCTGGGATTGAAGAAAAAATGCACAGCTTCACAGGCAATGCAGTTGACACCTACAGGGGTCCTTCCCATCCCCAGGCTTCCATCTACATCCTGAGGCTGCGCTCCAAACAGCAGAACAGCAGAGCTACAGTGTACCTCCATGAAGGCCTGGGCCCCTCAGGCGCCTTCCCTCTGCTCCCAGCTGACCCTCGAGTTCACACATTAGGCGTAGGCATGACCAGTGTCACCCTCAGCTGGGCTCCCAGTGCCTCGATAACCAGTCTCCCACAGACGCAGAAAAGCTATGACTACTGTGTCCTCGTCAACTCTCAGCAAAACTTGCCCAGTGTTTGTGCTGCACAAGAAAGCATAGGGAAAAAGAAAGACCAGAAacaagaaaagaaggaaaggaggagaagaGTGACAGTGTGGCCAATTTTGAAAGAGTGGTGGTGGCAGCAGTGGGACTCTTATCCTGAACCCCAGAGTCCACCTTCGTCCCTTGCTGATGATAATGCTGatctccagtgtgtgtgtcaggggacAGAGAGTGTTTGCACCGTCTCTGAGCTCCTGCCTGACACCCAGTATTACTTTGACGTCTTTGTAATCGACAGGCTGAACGGGACCAGCATGGCGTACAAGGGGACATTTGCTCAAACGCACGAGGAGGCTCGGCCGGAGATTATCACACTAAGAGAAGGGGAGCTGAGGTGGGTGACCTTCCGTGACAGAGGCTCTAACTCAGAGCAGTTCTTCAGTTTCCGTCCTCGGGGCTGGCAGCAGAGTGGCCTCCTCACCTTGCAGAGCTGCGGTGGAGGTGAAAAGGTTAAGGTCACCGTGTCCAGTAAAGGTCAGGTTTTGACCTCCCAGGCAGTGGGGGGAGATTTAGTGCACATTTGGCTCCAGGGAAGTTCGTCCTATCTCATCCACTTGGAGAGAGAAGGAACTACTACAGGCCAGATTTCTGCTGCTGCAGACCCAGCTCTACCAGGAGGTCTGACGGCTTCAGTCAAAATGCAGACCTCCTCAGCCTACCACCGCAGAGGGGTCCCATCTCTGCCCTCAACCTTGCAGATAAAATCCTTTAACCGGCTGCGTGGTTGCAACAGTGTCACCCTGGCGTGGATGGGCACAGAGGAAAGAAGCCTGTACTGCGTGTACCGCAGAAAGCTGGGAGACCATGAAGCAGAGGCAGGAGGAGCATCAGCTCTAACTGCGCCCTGTCTGGGGCCAGAGTCCCGCTCTGACACCGAAAGGGTTCTCTGCAAGTATTTCCAGGAGCTGAATCCTCGGCGGGCCGTCACTACAGCTGTGATCGGGGGCCTGAAACCAGGGATGGCCTACGTGTTTGATGTCTATCTAATGAGACGCTGGGGGATCCCTATCAAGTATGCCAGCAAGATGGTGAAGACCAGAAAGGAATGCTGAGCTGCCGCCCcctacaggtttttttttagaCTGTCCCAGTTTAGGGGGAAATGCATCGGCCATGGACATGAGACTGACCATGAGAACGAAGCCATTTGACTGTTGTGGAGAGACTGTTACCATAACAAGAAAATATTCCCCCTGGAGGAGCAATGGTTTTATTTAAACTCCACTTGCACTATCCATGCAAGTGGATGGATGGCATATGAGAATGATCTGCACACCAGCAAAAGTTCATAACATTTACAATACAACTACTGTGCTTTcgtcattttgtttttcattgttgatgatgatgatgatgatgatgatgatgatgatgatgctgtgcCAGTTGTCCAAGTGcttattttgtgttgtgtgagtACAAAGGACAGATGAGGTTTATGATGACAGAATGtcaatacaaaaaacaacaacaacaacaacaacaacaacaacagagactgTGCCAAATATGCAACAGAAACAGATGGGGCAATAATTGGATAACATCTGAGACAGGGGGGTTTGCATTGTATATCTCCAGTGCTGCATATTGTACAGGCTTATAAACACAGATGGGTGCAATCTACAGATGCTTAGTTCAAAGTcagtgtgtatctttgtgttcTGCTTTCGCATGAAGCAGTGAAAAATACTTAGTGACTTGCCTCATTGTCTTTGATGTATTCTTGTGCTGCTTCAAACGCACCAATAAATACTAGGGTACCTGTA

Function

NR:

description
PREDICTED: protein NDNF-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039783018.1 True 3190 mRNA 0.51 4 12935352 12944733

Neighbor

gene id symbol gene type direction distance location
LOC120547885 LOC101486877,LOC103368957,LOC104964621,LOC102308949,LOC102077541 coding upstream 4188 12923941 ~ 12931164 (+)
grid1a grid1,LOC102208220,LOC102794002,LOC103133624,LOC107375932,LOC100703311,LOC101486211 coding upstream 173547 12499527 ~ 12761805 (+)
wapla wapl coding upstream 510188 12405925 ~ 12425164 (+)
LOC120548561 LOC104931072,LOC103359313,LOC101484981,LOC102207276 coding upstream 532756 12376522 ~ 12402596 (+)
pcnx2 pcnx2 coding upstream 759396 12142395 ~ 12175956 (+)
dnajc9 dnajc9 coding downstream 949 12945682 ~ 12948629 (+)
ecd ecd coding downstream 18324 12963057 ~ 12971062 (+)
LOC120548466 dusp13,LOC103368962 coding downstream 31584 12976317 ~ 12983373 (+)
p4ha1b p4ha1 coding downstream 40040 12984773 ~ 12999531 (+)
actn2b LOC100702502,LOC106906181,LOC103133606,LOC103476717 coding downstream 56127 13000860 ~ 13021927 (+)
G193395 NA non-coding upstream 2498 12857800 ~ 12932854 (+)
G193393 NA non-coding upstream 90972 12844072 ~ 12844380 (+)
G193392 NA non-coding upstream 167878 12767268 ~ 12767474 (+)
G193373 NA non-coding upstream 469539 12465597 ~ 12465813 (+)
G193296 NA non-coding upstream 754399 12178791 ~ 12180953 (+)
G193661 NA non-coding downstream 808010 13752743 ~ 13754796 (+)
G193701 NA non-coding downstream 1001340 13946073 ~ 13946351 (+)
G193709 NA non-coding downstream 1027057 13971790 ~ 13972115 (+)
G193837 NA non-coding downstream 1564866 14509599 ~ 14510920 (+)
G193847 NA non-coding downstream 1746618 14691351 ~ 14692096 (+)
LOC120548560 plekha1,LOC103359314,LOC101483871,LOC102289782,LOC102791929,LOC104931082 other upstream 562081 12351323 ~ 12373271 (+)
sf3b5 sf3b5 other upstream 644822 12287013 ~ 12290530 (+)
oprm1 LOC104946549,LOC106536872,LOC107375811 other upstream 656977 12246951 ~ 12278375 (+)
zbtb18 zbtb18,LOC102787611 other upstream 1044149 11856987 ~ 11891203 (+)
sdccag8 sdccag8 other upstream 1144813 11717893 ~ 11790539 (+)
chrm3a LOC101465548 other downstream 178285 13123018 ~ 13209210 (+)
G193730 mettl10 other downstream 1129909 14074642 ~ 14076457 (+)
zgc:91976 sgms1 other downstream 2265106 15209839 ~ 15233875 (+)
LOC120548468 NA other downstream 2850237 15794970 ~ 15803515 (+)
lrmda clg13h10orf11,LOC102312243,LOC101474007,LOC106515339,LOC102208092 other downstream 2968029 15912762 ~ 16129667 (+)

Expression


Co-expression Network