LOC120547793 (LOC108247470,LOC106529920,LOC107096283,LOC102227626)


Basic Information

Item Value
gene id LOC120547793
gene name LOC108247470,LOC106529920,LOC107096283,LOC102227626
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 6553886 ~ 6583738 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039783480.1
TCCGAGTCAGCTGTCAGCTACAGTATGTCAAAGATTGCTGCTGCTCTAGCTGTGTTTCTCACACGTTGTTATCCTGTATTATATTGCTGTAGCtgtaataatcatatatatatgCTTAAAGCAGGGATGACCTGACTCTTTGGATTTTGGTAGAATTGAATACACCAGCTGGGTCCTGTATACCCCGGTGTGATGCATTCGCTGGCTCAGGAGATCCAGGGCTTCTCCAAAAACCGTCTGAAGAAACAGTGCACGTGTGTTACCACGGTGACAGGCAGGAGGCTTCTGGAGAGGAGGGGTgatggaggagagggagatgaGCAGGTTGAAGAGCTGGAAGAGGAAGTTGGATGCGGATTTGTAGAAGATACAAGTCTGGACCTTCAAGTTGGTGTCGTTAGACCCTTCCTACTGCtggCCTCTCAGGATGCAGCCCACGACATTGACACCCTGCAGAGATTTAAGGTGTCTCATGTGCTAAATGTGGCCTATGGAGTGACTAACCTGTTCCCAGATCAGTTGATTTATAAGACGCTGCAGATCCTGGACCTCCCAGACACTGACATCACTTCATATGTCGGGGAATGCAGCTCCTTCATAGATCAGGCCCGAGAACAGGACGGTGTGGTGCTGGTCCACTGTAACGCGGGCGTATCACGCTCTTCCTCCGTTGTCATTGGCTACCTGATGTTGAGGGAGGGGCTTTCGTTTGACGATGCATACAGCCAGGTGAAAGTGGCGAGGCCCTCAATTCGCCCCAACCCCGGCTTCTACCAGCAACTACAGGGTTACaaaccttaaagctgcattcattattttttgtccacttgggaaagacaacacatatacatatatattacatatcaTGGAACCTTAATATAATGGTGAACAAAaggttgcttatttacacatgcAAGCTCATTATTCACTCTTCTTTTAGCACTGTTTTGGTCCCCACCAACTCtggagggaaatatctggatctttagctgctaaatgctccactgcgttcaccagctagtctccaATTGTGTCTATGTTCTGTTTGGTGCTAAACAGGTTGCGTACAGTGtatttttagagctttttcactgaaagCAGCTGCCTGTAAGAGCGATCCAAAACAGGAAAGTTGTGGGCTGTGTAAACAAAACATCGAGCTGAAAGAAGCTTAAAGGGGAACTGCAGATTTGGTGATAATTCTCTTTTCCCACTACACATAATCATTTGATccattttaatgtaaaaatattgatAAGTGCTGCTTCAAGGAACTACAAATCTGTTCTTCAACTTGAGAAGAAGCCTTacaaaactacaacaccacctTGTAGTACCACAATTGTAGTGTTGTACCAAAAGCTGTAGGGCTTTATGTTTGCTTTTCTCCTACCTGTGATAAACAATTTTTGAAAACCACCCTGCCGTTTGTCTGCCTTTGTAATGATTATGTTTTATTATCAAACCTAAgaaaaatttcaataaaatatATCAATTTGCAGCAGGaagatatttaaacattttaatgactCCCTAAACAATGATTTTGTTTCTTGAAAGAAATGCAACCCAGAAGTAATGTGATAATGTATTCACTAAAAGAAATTTCAATGCAAGGTGTGCCATATGTCGATGAACTTGCccagtatgtatgcatgtgttgaATGGGTAATTTGTCTAAAAATAGAGTGGGTAAATGAAAAACTGTGTCTACTTTTCATTCCACAGTACTAAAAGTGTTTGATTGAGTGTCTGATTAGCTATTGGATCCATTTATTTTAGAGGCACTTGTTTTCTTTGCAGTATAGCTTGTTTTCTAATTAAAGACGTACCACTTTTT
>XM_039783481.1
TGTTTTGGCTTTTGGTGGAGCAGAGACGACGCCCGATTGCCAGCTTAGCGGTGGTTAGCTTAGCCAGCAGACGCCGCCATTACCAGCCGACGTTAGCTAGCTATTAACGCTACTGCAGGCCTCAAGCTTTGCCGATTTCACCTCAGGGAGCTTACTTTTCACAGTTTCAGTTGAATTTTAAGTGACAGACATTTACTATACTGTTCATAATAAGTCTACATGTGTCCTTAATCCAACTGAGAATCCGTTTACATCGTAAAACAAATGGGCCACTTTACCGCAAGCTAACGCGACAGCTTGTGGCTAGCAGTGCTTGTTTCCAGGGATGCTAAGGGGACATTTAGGATAACACAGCTGGGTCCTGTATACCCCGGTGTGATGCATTCGCTGGCTCAGGAGATCCAGGGCTTCTCCAAAAACCGTCTGAAGAAACAGTGCACGTGTGTTACCACGGTGACAGGCAGGAGGCTTCTGGAGAGGAGGGGTgatggaggagagggagatgaGCAGGTTGAAGAGCTGGAAGAGGAAGTTGGATGCGGATTTGTAGAAGATACAAGTCTGGACCTTCAAGTTGGTGTCGTTAGACCCTTCCTACTGCtggCCTCTCAGGATGCAGCCCACGACATTGACACCCTGCAGAGATTTAAGGTGTCTCATGTGCTAAATGTGGCCTATGGAGTGACTAACCTGTTCCCAGATCAGTTGATTTATAAGACGCTGCAGATCCTGGACCTCCCAGACACTGACATCACTTCATATGTCGGGGAATGCAGCTCCTTCATAGATCAGGCCCGAGAACAGGACGGTGTGGTGCTGGTCCACTGTAACGCGGGCGTATCACGCTCTTCCTCCGTTGTCATTGGCTACCTGATGTTGAGGGAGGGGCTTTCGTTTGACGATGCATACAGCCAGGTGAAAGTGGCGAGGCCCTCAATTCGCCCCAACCCCGGCTTCTACCAGCAACTACAGGGTTACaaaccttaaagctgcattcattattttttgtccacttgggaaagacaacacatatacatatatattacatatcaTGGAACCTTAATATAATGGTGAACAAAaggttgcttatttacacatgcAAGCTCATTATTCACTCTTCTTTTAGCACTGTTTTGGTCCCCACCAACTCtggagggaaatatctggatctttagctgctaaatgctccactgcgttcaccagctagtctccaATTGTGTCTATGTTCTGTTTGGTGCTAAACAGGTTGCGTACAGTGtatttttagagctttttcactgaaagCAGCTGCCTGTAAGAGCGATCCAAAACAGGAAAGTTGTGGGCTGTGTAAACAAAACATCGAGCTGAAAGAAGCTTAAAGGGGAACTGCAGATTTGGTGATAATTCTCTTTTCCCACTACACATAATCATTTGATccattttaatgtaaaaatattgatAAGTGCTGCTTCAAGGAACTACAAATCTGTTCTTCAACTTGAGAAGAAGCCTTacaaaactacaacaccacctTGTAGTACCACAATTGTAGTGTTGTACCAAAAGCTGTAGGGCTTTATGTTTGCTTTTCTCCTACCTGTGATAAACAATTTTTGAAAACCACCCTGCCGTTTGTCTGCCTTTGTAATGATTATGTTTTATTATCAAACCTAAgaaaaatttcaataaaatatATCAATTTGCAGCAGGaagatatttaaacattttaatgactCCCTAAACAATGATTTTGTTTCTTGAAAGAAATGCAACCCAGAAGTAATGTGATAATGTATTCACTAAAAGAAATTTCAATGCAAGGTGTGCCATATGTCGATGAACTTGCccagtatgtatgcatgtgttgaATGGGTAATTTGTCTAAAAATAGAGTGGGTAAATGAAAAACTGTGTCTACTTTTCATTCCACAGTACTAAAAGTGTTTGATTGAGTGTCTGATTAGCTATTGGATCCATTTATTTTAGAGGCACTTGTTTTCTTTGCAGTATAGCTTGTTTTCTAATTAAAGACGTACCACTTTTT

Function

NR:

description
PREDICTED: dual specificity protein phosphatase 19-like isoform X3

GO: NA

KEGG:

id description
K14165 K14165; atypical dual specificity phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039783480.1 False 1840 mRNA 0.42 5 6555598 6583738
XM_039783481.1 True 2026 mRNA 0.43 5 6553886 6583738

Neighbor

gene id symbol gene type direction distance location
plekha3 plekha3,LOC102799655,LOC103387813 coding upstream 86658 6447144 ~ 6467228 (+)
pdxkb LOC104925589,LOC107376125,LOC100693660,LOC103151893,LOC103476575,LOC101069818,LOC106527750,LOC103387811 coding upstream 122756 6401031 ~ 6431130 (+)
LOC120548010 itsn1 coding upstream 176470 6368037 ~ 6377416 (+)
setd4 setd4,LOC102797995 coding upstream 245687 6296247 ~ 6308199 (+)
LOC120548190 LOC102080562,LOC102201633 coding upstream 363573 5779189 ~ 6190313 (+)
LOC120548221 NA coding downstream 12303 6596041 ~ 6672024 (+)
LOC120547615 LOC102195517,LOC102294040,LOC101480586,LOC100690426,LOC101068904 coding downstream 245833 6829571 ~ 6837990 (+)
supt3h supt3h coding downstream 258755 6842493 ~ 6860186 (+)
cdh11 cdh11 coding downstream 1109850 7693588 ~ 7790218 (+)
chrna1 chrna1,LOC103363491,LOC446087 coding downstream 1304250 7887988 ~ 7905745 (+)
G192214 NA non-coding upstream 43444 6509724 ~ 6510442 (+)
G192212 NA non-coding upstream 46450 6506321 ~ 6507436 (+)
G192205 NA non-coding upstream 75652 6477911 ~ 6478234 (+)
G192203 NA non-coding upstream 82005 6471539 ~ 6471881 (+)
G192143 NA non-coding upstream 238785 6311396 ~ 6315101 (+)
G192245 NA non-coding downstream 83646 6667384 ~ 6667710 (+)
G192244 NA non-coding downstream 90877 6674615 ~ 6675983 (+)
G192252 NA non-coding downstream 103594 6687332 ~ 6687575 (+)
G192282 LOC103387761,LOC103476592,LOC106529247,LOC108242979,LOC102217296 non-coding downstream 250279 6834017 ~ 6934678 (+)
G192283 cdc5l,LOC101487762 non-coding downstream 276588 6860326 ~ 6862811 (+)
LOC120548025 ppp1r1c,LOC106939859 other upstream 48035 6485581 ~ 6505851 (+)
si:dkey-22n8.3 LOC103376236 other upstream 156987 6020122 ~ 6396899 (+)
itsn1 itsn1 other upstream 192895 6324515 ~ 6360991 (+)
atrnl1a LOC102310066,LOC100692310,LOC101487275 other upstream 1305150 4903722 ~ 5248736 (+)
G192040 LOC104951079 other upstream 1666863 4886376 ~ 4887023 (+)
zc3h15 zc3h15 other downstream 192005 6775743 ~ 6789086 (+)
LOC120547751 LOC103371019,LOC107095977 other downstream 216776 6800514 ~ 6804552 (+)
bean1 bean1,LOC102779979 other downstream 1482598 8066336 ~ 8119063 (+)
meis1b meis1,LOC101073206,LOC106613898,LOC103387108 other downstream 2530918 9114656 ~ 9195416 (+)
kcnq5a LOC101074332,LOC101486129 other downstream 2913053 9496791 ~ 9602882 (+)

Expression


Co-expression Network