LOC120547940


Basic Information

Item Value
gene id LOC120547940
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 4458016 ~ 4461718 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039783769.1
CAGAGGACAAAACATCAGACATTGGTGTAGGGAACTCATTCagtgtcttcagctgtcaaAGGTTTCACTCTGAAGAATGGGAGAGGTCTACGTTAACAACACTTTACAGGACATGAGCCATGATTACAACAGCACCTTCAACGACCTTgagtttgaaaaaataaaattcatcaAGTATGTGATGATATGCATAATCAGCTGTATTGGAATTCCTTTGACCCTCGTGGCCATCTATGCTCTTTATTCTCTGGTGCGAAAGGATCATGTCGCTCCGATCTACGTCATCAACCTTCTCATTTCTGACCTCATTCAGTTCTGCTGCATGATCGGTCGTGTGGCACCACATGAGGACAAGAATACAACTAGAATTATCAGTTCTATCTACAACTCTAGTCTGATAGCCAGTGTTGGCTTCATGCTGTGCATCGCCCTGGAAAGgtatttggtcatcGCCTGCCCACTGTGGTACCACTTCAGACGAAACATCAAGATCTCTGTGGTTGTCTGTGTCCTGGTCTGGATAATTTCTCTTGCCATTGGCTCCACTTTTGTATTTGGGTATTTTTCAGAAATCCCAGTAACCATCTTAGCCATATTTTTCCTCCTTCCCCTCCCACTGCTCATATTCTTTCTGGTTGGGACCCTTAAAGCCCTGTCTGCTTCCATCTCAGTTCCTGCTGATGAAAAACGTCGAATTCTGGCAATGTTGGTCCTGGTGCTGCTTATTTACACGCTGCTGTTCCTGCCCAGAATCATCAGGTTTCACATAGTTGACATGACCCTCTACATCCTGTCTTATGTGTTTCTTAAGTTGAGTCCTCTTGCAGACTTAGTTCTGTATGTTTTCATGAGGAAAGGGGCCATAGACAAGCTTTTGgcctctgtgtgttgttgcagAATGGACAGCAATGATGTCAGCAGTTCAACAGTATGAATGATGACAACATGTCCACAGTCAGCTTCAtgtaggcagagagagagagagagagagaaaggggagaaacaGAAGAAGACATGTAGGCAAATAGAAAGGATAGAGACAACAACTATTATGTCTTCTACTGATATGGTTTTCAATAAGACACCTAACTGTTGATGTAAGCCATCTTTTGTAGGAGTTGGGTCTGCGCCAATCACTCTTCTCTTTGCAACTTTGGATCTATCACCCTCTCCGACACACCTGTGTCATGTTAtagatgtgcaaagtattttgcgtatgactattttagaaaaaaaatagtcTGAAGCTGAAGCACCCCTAAAAATCATCTCAGCACCCCTGAAAATAAAGTCTTCATCattgtgattctgtgaaatCGTTTAGTGCTCAAACGTTATTACTTTTGCAAACCTGATTTTAGCGATGGAATAGGATAAATGACGACAGGCTCAGCTCAGTTGTAGCCTAAAGTCAACAGCCTGTCTGTGATTCACTGGACGAGGGCACCTCAGCCGACTGTTTGGGGAATTCGGTCGTCAGAGTATGGCTACTTTCAACCACTGAAAAGGTATGGCTAATGGAGTGAAAATTAAATCTAATCGAATGAACACGTTAAGTAGGCTACAGGTGTAGTATTTGTggaaccagtctgtgatccctGATCACAATGATAGTAATTATATCTGAATTAGCCTAGCTTATTCACCACGGAGTCCAATTTTGTTTTGAAACGTTAGACAAAATTGCTAACTGTAGGCATGTGTAGCTTAGGAGTAGCCTACAACAAGTTTTTAAAGTTTGCTATTAATAGCCTGCCGTAACGGCTTGAGCACCGCTAAAAATAGCCTATGCTACAGTTACCTCCCTACCAGAcactttcttatttttaactgtcaatgccaatgaaaaataaataattcgaCCTGACGGATCATCATACTCATTCATATCAGAACTGATACACTGGAACAACAAACCCTGACCCACAGTTTCCCCATAGATGGATatacgtttctttttttaaagaaaacagccAGGTTCAGGAGAGAAAgtataagataagcctttaacATTATCCCACTGCACTGAACAGCAACCCCATATTCACATAGGTTATAAATAGGTGAATGTATAACCTTTGGTAGCCTACACGATACATTCTCTGTTGATTAGTTGATTACATTTGCCTTCTGGTTGACAGCACAAAGAAGTGGGGAGAATAGAGAGGGTGAAGGGCAGAGAGAGCAAGATTAACAAGGTGAGAAAATGGCTAGGTAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039783769.1 True 2220 mRNA 0.42 4 4458016 4461718

Neighbor

gene id symbol gene type direction distance location
LOC120547938 NA coding upstream 29344 4423327 ~ 4428672 (+)
LOC120548201 NA coding upstream 68231 4384138 ~ 4389785 (+)
LOC120548450 NA coding upstream 75574 4378205 ~ 4382442 (+)
LOC120547632 NA coding upstream 105041 4350604 ~ 4352975 (+)
LOC120548448 NA coding upstream 393517 4007726 ~ 4064499 (+)
LOC120547944 NA coding downstream 25789 4487507 ~ 4511812 (+)
LOC120548456 NA coding downstream 41644 4503362 ~ 4601266 (+)
LOC120547941 NA coding downstream 82894 4544612 ~ 4548774 (+)
LOC120547943 NA coding downstream 113865 4575583 ~ 4578361 (+)
LOC120547947 NA coding downstream 152205 4613923 ~ 4615961 (+)
G191918 NA non-coding upstream 34209 4384230 ~ 4423807 (+)
G191909 NA non-coding upstream 41729 4348505 ~ 4416287 (+)
G191890 NA non-coding upstream 240963 4216818 ~ 4217053 (+)
G191887 NA non-coding upstream 271359 4186404 ~ 4186657 (+)
G191885 NA non-coding upstream 279886 4177835 ~ 4178130 (+)
LOC120547946 NA non-coding downstream 146424 4608142 ~ 4609045 (+)
G191960 epas1a non-coding downstream 260989 4722707 ~ 4760414 (+)
G191962 NA non-coding downstream 264856 4726574 ~ 4773778 (+)
G191981 NA non-coding downstream 367901 4829619 ~ 4830101 (+)
G192035 NA non-coding downstream 421452 4883170 ~ 4883655 (+)
LOC120548449 NA other upstream 89690 4367151 ~ 4368326 (+)
arfgef3 arfgef3,LOC102791283 other upstream 110437 4250605 ~ 4347579 (+)
G191903 NA other upstream 169372 4287897 ~ 4288644 (+)
LOC120547552 NA other upstream 1118931 3163824 ~ 3339085 (+)
LOC120548437 NA other upstream 1347058 3093967 ~ 3110958 (+)
LOC120548511 LOC101485366,LOC100693926 other downstream 167339 4629057 ~ 4678348 (+)
G192040 LOC104951079 other downstream 424658 4886376 ~ 4887023 (+)
atrnl1a LOC102310066,LOC100692310,LOC101487275 other downstream 442004 4903722 ~ 5248736 (+)
si:dkey-22n8.3 LOC103376236 other downstream 1558404 6020122 ~ 6396899 (+)
itsn1 itsn1 other downstream 1862797 6324515 ~ 6360991 (+)

Expression


Co-expression Network