LOC120547941


Basic Information

Item Value
gene id LOC120547941
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 4544612 ~ 4548774 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039783770.1
TTTACCATATTTATTGTAGACTGTTTGGATGCAGAGGACAAAACATCAGACATTGGTGTAGGGAACTCATTCAGTGTCCTGCAGCTGTCAAAGgccccagatcTCCTAAACAGGTTTCACTCTGAAGAATGGAAAACGACACATCACTGGATATGAGACATGATAACAACAGCACCTCCAATGACTTTGACTTAGAAATATTATTCATCATCATAGATGTTGTGACATGCATAATGGTCTGTATCGGACTTCCTTTGACCCTGGTGGCCATCTATGCTCTTTATTCTCTGGTGCGAAAGGATCATGTTGCTCCGATCTACGTCATCAACCTTCTCATTTCTGACCTCATTCAGCTCTGCTGCATGATCGATTGGGTGGCACGACGTGCGGACCCGAACATACATCAAATGGTCTATTGTACCTACGACTCTGGTCTGTTTGCCAGTGTTTGCTTCATGGTGTGCATCGCCCTGGAAAGgtatttggtcatcGCCTGCCCACTGTGGTACCGCTTCAGACGAACCATCAAGATCTCCGTTGTGGTCTGTGTCCTGGTCTGGGTTTTTACTCTTATATTTTTCTTGACTGCTTTATTTTGGCATGTTCCAGCTTTTTTAATCACTTGGTTCATATGTTCGCTCCTTCCCTTCCCACTGCTCATATTCTTTCTGGTTGGGACCCTTAAAGCCCTGTCTGCTTCCATCTCAGTTCACGCTGACGAAAAACGACGAATTGTGGCAATGTTGGTCCTGGTGCTGCTTATGTACACGCTGCTGTTTCTGCCCAGAATTATCCTGCTTCTgaaaaaacatgacataaatGACACCCCCCTCTACATCCTGTCTGATGTGTTTCTTATGTTTAGTCCTCTGGCAGACTTAGTTCTGTATGGTTTCATGAGGAAAGGGGCCATAGACAAGCTTTTGgcctctgtgtgttgttgcagAATGGACAGCAATGATGTCAGCAGTTCAATAAGTATGAATGATGGCAACATGTCCACAGTCAGCTTCAtgtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039783770.1 True 1019 mRNA 0.45 4 4544612 4548774

Neighbor

gene id symbol gene type direction distance location
LOC120547944 NA coding upstream 32800 4487507 ~ 4511812 (+)
LOC120547940 NA coding upstream 82894 4458016 ~ 4461718 (+)
LOC120547938 NA coding upstream 115940 4423327 ~ 4428672 (+)
LOC120548201 NA coding upstream 154827 4384138 ~ 4389785 (+)
LOC120548450 NA coding upstream 162170 4378205 ~ 4382442 (+)
LOC120547943 NA coding downstream 26809 4575583 ~ 4578361 (+)
LOC120547947 NA coding downstream 65149 4613923 ~ 4615961 (+)
ccdc172 NA coding downstream 841645 5390419 ~ 5427836 (+)
LOC120548190 LOC102080562,LOC102201633 coding downstream 1230415 5779189 ~ 6190313 (+)
setd4 setd4,LOC102797995 coding downstream 1747473 6296247 ~ 6308199 (+)
G191918 NA non-coding upstream 120805 4384230 ~ 4423807 (+)
G191909 NA non-coding upstream 128325 4348505 ~ 4416287 (+)
G191890 NA non-coding upstream 327559 4216818 ~ 4217053 (+)
G191887 NA non-coding upstream 357955 4186404 ~ 4186657 (+)
G191885 NA non-coding upstream 366482 4177835 ~ 4178130 (+)
LOC120547946 NA non-coding downstream 59368 4608142 ~ 4609045 (+)
G191960 epas1a non-coding downstream 173933 4722707 ~ 4760414 (+)
G191962 NA non-coding downstream 177800 4726574 ~ 4773778 (+)
G191981 NA non-coding downstream 280845 4829619 ~ 4830101 (+)
G192035 NA non-coding downstream 334396 4883170 ~ 4883655 (+)
LOC120548449 NA other upstream 176286 4367151 ~ 4368326 (+)
arfgef3 arfgef3,LOC102791283 other upstream 197033 4250605 ~ 4347579 (+)
G191903 NA other upstream 255968 4287897 ~ 4288644 (+)
LOC120547552 NA other upstream 1205527 3163824 ~ 3339085 (+)
LOC120548437 NA other upstream 1433654 3093967 ~ 3110958 (+)
LOC120548511 LOC101485366,LOC100693926 other downstream 80283 4629057 ~ 4678348 (+)
G192040 LOC104951079 other downstream 337602 4886376 ~ 4887023 (+)
atrnl1a LOC102310066,LOC100692310,LOC101487275 other downstream 354948 4903722 ~ 5248736 (+)
si:dkey-22n8.3 LOC103376236 other downstream 1471348 6020122 ~ 6396899 (+)
itsn1 itsn1 other downstream 1775741 6324515 ~ 6360991 (+)

Expression


Co-expression Network