LOC120548162


Basic Information

Item Value
gene id LOC120548162
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 3832586 ~ 3845675 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784225.1
ATGGCTGTTAACATCCCAGGAGTGATAGTGATGGTGTTTTTCTACCTGCTGGTCCTTGGGACCGGCATCTGGGCTTCTTTCAAGTCCAAAAGGGAACAGAAGAAAAGTGCAGCCACTGGAACAGAGATGGCCCTGCTGGGAAACCGGAGCATTGGCTTGGTGGTGGGGATCTTCACAATGACAGCAATGTGGCTGAtAGGAGGCTTCATTGTTGGCATTGCGGAGATGGTGTACACGCCCTCTATGGGACTAACCTGGACAACGGTGTTGTTAATAGCATACAGCTCATCCTTTATTATTGTTGGCTTGGTGTTTGCAAAGCcaatgagagaaagaaagtatGTGACGATGCTGGACCCTTTCCATGCCAAGTATGGAAAAGTACTGACAGCTGGACTTTGCCTGGTTTCAATTTTTCTTGATCTGCTCTGGGTGCCCACAACACTCATTGGTTTAGGAGGAACCATGAGTGTGGTTTTGGATTTGTCCTTCCCTTTGTGCATTTGGATCTCTGCTGCCGTTGCCATTACCTACACACTGCTGGGAGGTCTCTACTCTGTGGCCTACACAGATATTATACAGCTTGTGCTCATATTCTTCAGCTTGTGGATCTGTGTTCCCTTTGCTTTGATGAACCCTTACTCCTTGGACATTAGCCAGACACTGATGAACAACACCTTACATGCTCCCTGGATTGGTACACCAGGACTGAAAAAGACCTGGATAATGATTGATGACTTGTTATTCTTAGCACTAGGGAATGTGGGATATCAGGTCTTCCACCAGAGGACTTTGTCAGCGTCTTCAACATCCACAGCCAAGATCACTTGCTTTGTCGCTGCTGTCATCTTGCCTGTATTTGGGATACCTTCTATACTGCTTGGGGCAGCCGCTGCATCCACAGACTGGAACCTGACTTCCTATGGTTCTCCATCTCCATATGAACGAGGGGAATCAGCTCTAGTTCTGCCGCTGACCCTGCAGCACCTCACCCCGTCCTTCATCTCCATCATCGGTACTGGATGTGTGGCTGCCGCTGTGATGTCATCGGCTGACTCTGTTTTGCTTTCTGCAGCTTCTGTCTTCACCTCCAACATATACAAGAACATCCTGAGGCCTCAGGCATCAGACAGAGAGACTCTGTGGGTGATCCGTGCTTCTGTCTTGGTAGTGGGCTTAGTTGGTACATCACTGACCAACCTGGAAAACAGCATCTTATTGTTCTGGTTCATTGGTGCTGAAGTGGGCTACGTCATAATCTTCCCTCAACTCGTCTGCGTCCTCTTCTTCAACATCTCCAACGGTTACGGGGCTGTGATGGGTTTCCTGGTGGGAGCTGTGTTAAGACTTCTCAGTGGAGACCCATCACTAGGGTTAGCACCAGTCATTCACTTCCCAGGATGCACTCTTGAGGACAGTGTTTATGTCCAGTACTCTCCGGTTAAGACCATCTCCATGCTGTCTGCCGTTGCTGCCATCTTGTTTTTCTCCTACCTGGCTTCTGTGCTCTTCAACAAAGACCTGCTTCCTGAGAAGTGGGATGTGTTCAAAGTGAAAGCCCAGCACTCACCACAACCACTGACTCCAACAGATGGCGACACAGAACACAATGAGAATGAGAATTTAAATAGAAACAACTGCCAGACTGAGACACTGGAGCCAATGATTAGCACAAGCTGTTAGCGTTCTT

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784225.1 True 1690 mRNA 0.48 9 3832586 3845675

Neighbor

gene id symbol gene type direction distance location
LOC120547503 ankrd1 coding upstream 5508 3813407 ~ 3827078 (+)
ppp1r3ca ppp1r3c coding upstream 240790 3589225 ~ 3591796 (+)
fgfbp3 fgfbp3 coding upstream 271166 3548104 ~ 3561420 (+)
LOC120548444 LOC108246626 coding upstream 298358 3532714 ~ 3534228 (+)
LOC120548518 LOC103361435,LOC104937509 coding upstream 340213 3480321 ~ 3492373 (+)
LOC120548448 NA coding downstream 162051 4007726 ~ 4064499 (+)
LOC120547632 NA coding downstream 504929 4350604 ~ 4352975 (+)
LOC120548450 NA coding downstream 532530 4378205 ~ 4382442 (+)
LOC120548201 NA coding downstream 538463 4384138 ~ 4389785 (+)
LOC120547938 NA coding downstream 577652 4423327 ~ 4428672 (+)
G191793 NA non-coding upstream 102045 3702592 ~ 3730541 (+)
G191790 NA non-coding upstream 189566 3640618 ~ 3643020 (+)
G191789 NA non-coding upstream 192416 3638179 ~ 3640170 (+)
G191787 NA non-coding upstream 205667 3626655 ~ 3626919 (+)
G191785 NA non-coding upstream 207884 3623350 ~ 3624702 (+)
G191821 NA non-coding downstream 5612 3851287 ~ 3851808 (+)
LOC120547548 NA non-coding downstream 35990 3881665 ~ 3882305 (+)
LOC120548325 NA non-coding downstream 68884 3914559 ~ 4000186 (+)
G191885 NA non-coding downstream 332160 4177835 ~ 4178130 (+)
G191887 NA non-coding downstream 340729 4186404 ~ 4186657 (+)
LOC120547552 NA other upstream 493501 3163824 ~ 3339085 (+)
LOC120548437 NA other upstream 721628 3093967 ~ 3110958 (+)
G191571 NA other upstream 814138 2770633 ~ 3018448 (+)
G191573 sptbn1,LOC107396444 other upstream 1054219 2775308 ~ 2778367 (+)
G191567 sptbn1 other upstream 1066524 2762050 ~ 2766062 (+)
arfgef3 arfgef3,LOC102791283 other downstream 404930 4250605 ~ 4347579 (+)
G191903 NA other downstream 442222 4287897 ~ 4288644 (+)
LOC120548449 NA other downstream 521476 4367151 ~ 4368326 (+)
LOC120548511 LOC101485366,LOC100693926 other downstream 783382 4629057 ~ 4678348 (+)
G192040 LOC104951079 other downstream 1040701 4886376 ~ 4887023 (+)

Expression


Co-expression Network