LOC120548201


Basic Information

Item Value
gene id LOC120548201
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 4384138 ~ 4389785 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784284.1
CAAAACATCAGACATTGGTGTAGGGAACTCATTCCGTATCTTGCAGCTGTCAAAGGTTTCTCTCTGAAGAATGGAAGATTTCTCCAATAATGACACATCACTGGACATGAGCCATGGTTACAACACCTTCTATGACTACTATATACGAGCAGCATTCATCATAAATGTGGTGACATGCATAATCATCTGTATTGGACTTCCTTTGACCCTGGTGGCCATCTATGCTCTTTATTCTCTGGTGCGAAAGGATCATGTTGCTCCAATCTACGTCATCAACCTTCTCATTTCCGACCTCATTCAGTTCTGCTGCATGATCGGTTGGTTGGCAAAACCTGAGAACTGGAACAAAACTAGCATTGTCTATAGTATCTACTACTCCAGTCTGATGGCCAGTGTTGGCTTCATGGTGTGCATCGCCCTGGAAAGgtatttggtcatcGCCTGCCCACTGTGGTACCGCTTCAGACGATCCATCAAGATCTCTGTGGTGGTCTGTGTCCTGGTCTGGACCCTTCCTCTTGTCTATtgcttcatttctttttttttgaataCCCCAAATCTTTCAGTAATTATttattgcatattttttttccttcccctCCCACTGCTCATATTCTTTCTGGTTGGGACCCTTAAAGTCCTGTCTGCTTCCATCTCAGTTCACGCTGATGAAAAACGACGAATTGTGGCAATGTTGGTCCTGGTGCTGCTTATTTACACGCTGTTGTTCCTGCCCACAACAATTTTCTGTCTGAAAGAGGGAGACAGATGTGATACTACCATCAACAGCCTGCCTTATTTTTCTATTAGGTTGAGTCCTCTTGCAGACTTAGTTCTGTATATTTTCATGAGGAAAGGGGCCATAGACAAGCTTTTGgcctctgtgtgttgttgcagAATGGACAGCAATGAATACAGCAGTTCAACAGTATGAATGAGTCAGCTTCATGTAGGCAGAGaaatagggagagagagacagaaaggggagaaaACAGAAGGAGACATGTTGGCAAATAAAAAAGGATAGAGACAAGAAAGATTCTCTCTTCTATGGATATGGTTTTTAATAAGACACCTAACTGTTGATACAAGGAAGTATTGTCTTTATGCTGTGGGAGTTATGCTTGCtgggaaatgtttttgtaaacttgctcagctgtcaatcaaatatGTCAATCAAATATGCTGTTATTAGGTTGCTAGTCTAGTTAATGTCTATCAGTATTTTACTGTACATGGTGGCCAAATTTCACATTTTGATTTAGAATCCTTTGTACATGAGTCAAAAGAATATCCTGAATGATACCATAAGAGAAAAACTGTGAGACAGTTAAAAGATAAAGAGTTTAAAGATGGGCAGATCAAGTAAGAAACAATCCTCACAGTGAAACCCCTATCACTGGTAAAGCTGTAACaccccccaaaacacacacctcTAAAAGCCTGAAGGTCTTTGATGTGTAAGACTTATGATTTGGTGCCCCCCAGTGTTAGAATAAAAAAGGCCCTGTAACCCCCGGTTACCAGAACCCTGTGAAATAGTTGACTGAACTGTAAGTTAATGtaacaattaaaagttaaaaataatatttatttaatttgataaCTGTACTGATCTAATTCACTGGGCTAAACCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784284.1 True 1638 mRNA 0.40 4 4384138 4389785

Neighbor

gene id symbol gene type direction distance location
LOC120548450 NA coding upstream 1696 4378205 ~ 4382442 (+)
LOC120547632 NA coding upstream 31163 4350604 ~ 4352975 (+)
LOC120548448 NA coding upstream 319639 4007726 ~ 4064499 (+)
LOC120548162 NA coding upstream 538463 3832586 ~ 3845675 (+)
LOC120547503 ankrd1 coding upstream 557060 3813407 ~ 3827078 (+)
LOC120547938 NA coding downstream 33542 4423327 ~ 4428672 (+)
LOC120547940 NA coding downstream 68231 4458016 ~ 4461718 (+)
LOC120547944 NA coding downstream 97722 4487507 ~ 4511812 (+)
LOC120548456 NA coding downstream 113577 4503362 ~ 4601266 (+)
LOC120547941 NA coding downstream 154827 4544612 ~ 4548774 (+)
G191890 NA non-coding upstream 167085 4216818 ~ 4217053 (+)
G191887 NA non-coding upstream 197481 4186404 ~ 4186657 (+)
G191885 NA non-coding upstream 206008 4177835 ~ 4178130 (+)
LOC120548325 NA non-coding upstream 383952 3914559 ~ 4000186 (+)
LOC120547548 NA non-coding upstream 501833 3881665 ~ 3882305 (+)
LOC120547946 NA non-coding downstream 218357 4608142 ~ 4609045 (+)
G191960 epas1a non-coding downstream 332922 4722707 ~ 4760414 (+)
G191962 NA non-coding downstream 336789 4726574 ~ 4773778 (+)
G191981 NA non-coding downstream 439834 4829619 ~ 4830101 (+)
G192035 NA non-coding downstream 493385 4883170 ~ 4883655 (+)
LOC120548449 NA other upstream 15812 4367151 ~ 4368326 (+)
arfgef3 arfgef3,LOC102791283 other upstream 36559 4250605 ~ 4347579 (+)
G191903 NA other upstream 95494 4287897 ~ 4288644 (+)
LOC120547552 NA other upstream 1045053 3163824 ~ 3339085 (+)
LOC120548437 NA other upstream 1273180 3093967 ~ 3110958 (+)
LOC120548511 LOC101485366,LOC100693926 other downstream 239272 4629057 ~ 4678348 (+)
G192040 LOC104951079 other downstream 496591 4886376 ~ 4887023 (+)
atrnl1a LOC102310066,LOC100692310,LOC101487275 other downstream 513937 4903722 ~ 5248736 (+)
si:dkey-22n8.3 LOC103376236 other downstream 1630337 6020122 ~ 6396899 (+)
itsn1 itsn1 other downstream 1934730 6324515 ~ 6360991 (+)

Expression


Co-expression Network