LOC120548339


Basic Information

Item Value
gene id LOC120548339
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 9747308 ~ 9754782 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784530.1
GGCATGGGGagtggttagggtaagaataccaAGGTAAGCCAATCAGATTAAGAAAAATGCGGGCCGCGAGGCACGTCCCGTGACGTCGACACTTCTAGCGGATCCGATCTAGCATCTACCGGGGAAGTGTGGCGGTGAAGAGACAGAGGCCGCCCAAAGCACAACTCTACTGTGTGCAGTAACAGAGTGAGAGATTAGATGTGACTGCTGAAATGCTGCTGGAACGTCAGTGTAAAATTTGACGGTGCTATTTTGGAGATGCTGCCATAAATACGAAATTACTGGTTTGTCAatacacacaggacacaaataCCATTATGGGCCAGCTGTTCTCATCAGAAGAAGAGCTTTCTCAAGTGAAGGATGCGATTGGTTCTCTCCTCTACAATGCCATGTTGGAGGGCGGTGCCGTACCTGTCCTCGGAGTCGTCCACCCTCTTCTCCTAGCCAATCACGATGAGAGCCTTGACTCCCAGGCCGCCAGCCTCCAGGAACAACTACAGCAGCTGCAGGGCGACATTGGGAAGAGGGCGCCAACCTACCTGAAGGATCTGATTGGCCGATTGGCATCCTTTTCAGATGAGCCACGCCTGGCCGGCCTGGTGGGATTGGTGGTTACTATGGTGATGGACATGGCCTACTCGTCATCGAAACAGTCATCAGGTGTGAAAGGGAAGTCAGCGGGGTCATCATCATGCCAGCAGAGAGTTTGGGAGCTCCAGGAGGTGATGGAGGAGTACCTGAAGCGCTGCAGGATCAACCTGAGTGACAAAAGCAGGCTGATCCAGGACTCCATTCGACTTGAGGCCCAGCTCAGCCTCACCCTCACCCAGCTGAAGACCTGTCTGCTGGGGGGAGACTGTGACTCCAGGTCTCTGAGGCACTGGGCCAGTGGAGCAGCATTTCACACCCAGATGTTGGTTCACCTGGCTGGTTTTGAGGGCCAGGCTGAGCCGCTGGCTGCAAGGGCTGCACTGGAGCAATACAAGGAAGACCTCACCCAGATCATACCTGCTTACAGGCGTTATAAGTCTAATTCAGTGTGTGTCGTGAAATGTCGAGGGGGTCTGGCATCATGTGACCCCTCCAGCGAGGTGCCAGAGGAGGGATCCATGACGGGACTCActgtgacagacagagagacaggaaagagTGTGACCATCCCTCTATCCGCTATCAAGACAGAGACAGGGAGAAGAAGGACCGTCTCTGGGCTGGATACCACCTCTGCAACTGTGTCCTCCTCCATTAACCTGGACCTTATCACGTCAGATCAGTACGCCCAGGCATACCTGCACCATTTGTTCTCTGATAAGGGACCTGTGGCAGAGCTGGAGAACTACTTTATCAAGGCTAGTGTCAATCTGAGAACACTAAGAATTGAACCAGGATGTACAAATAAAACAGGGGTGGGAAATGGTATGGAACAAAGTGATGGAGTGCATCTTAATGATCGGGCACAAGGCATTGATGGGGAACAAAGAGTGGACAGGGGCAAAGGAGATAATCGGGGAAAGACGGACAGGAGAgaaagacgagacgagacggAGAAAAGTGAGCAGAGAGATGAAAGTTTGCAACTCAGTATTGTGGAGACGCAGCCGGATGAGAGCCTCAATCATCATGCAACAAGTACATGAAAGCCATGACTAGACAGCAGCATCAGAAAGTGCCCGTCCTTTATTGAAGAGAAACATTAAACTAAACTCCGAAACATGAAGGATTTTTGCagtgttgtttgtcatttatTCAGAGAGCTTATAACCTACTGCTGGAAAGAAGCTGAATGGCGGTTTTGCTGATTTGTCTGCAATGATATATATACTACTAAAGTGTCAACCCTGGCCAAAAATCAACTTTGGGCTTCATGTGATTTCTATTAAGTGTGTTTCACACAGGCTTTTCAAACCTGTACAGTTTAATAACACCTACTCTAAAGCAATTTCATTAAACATTTACAACTTTCAAGGAAAGAGTTTGGTTgtgtaataaaaacatttttggctgta
>XM_039784531.1
TTAGGCATGGGGagtggttagggtaagaataccaAGGTAAGCCAATCAGATTAAGAAAAATGCGGGCCGCGAGGCACGTCCCGTGACGTCGACACTTCTAGCGGATCCGATCTAGCATCTACCGGGGAAGTGTGGCGGTGAAGAGACAGAGGCCGCCCAAAGCACAACTCTACTGTGTGCAGTAACAGAGTGAGAGATTAGATGTGACTGCTGAAATGCTGCTGGAACGTCAGTGTAAAATTTGACGGTGCTATTTTGGAGgacacaaataCCATTATGGGCCAGCTGTTCTCATCAGAAGAAGAGCTTTCTCAAGTGAAGGATGCGATTGGTTCTCTCCTCTACAATGCCATGTTGGAGGGCGGTGCCGTACCTGTCCTCGGAGTCGTCCACCCTCTTCTCCTAGCCAATCACGATGAGAGCCTTGACTCCCAGGCCGCCAGCCTCCAGGAACAACTACAGCAGCTGCAGGGCGACATTGGGAAGAGGGCGCCAACCTACCTGAAGGATCTGATTGGCCGATTGGCATCCTTTTCAGATGAGCCACGCCTGGCCGGCCTGGTGGGATTGGTGGTTACTATGGTGATGGACATGGCCTACTCGTCATCGAAACAGTCATCAGGTGTGAAAGGGAAGTCAGCGGGGTCATCATCATGCCAGCAGAGAGTTTGGGAGCTCCAGGAGGTGATGGAGGAGTACCTGAAGCGCTGCAGGATCAACCTGAGTGACAAAAGCAGGCTGATCCAGGACTCCATTCGACTTGAGGCCCAGCTCAGCCTCACCCTCACCCAGCTGAAGACCTGTCTGCTGGGGGGAGACTGTGACTCCAGGTCTCTGAGGCACTGGGCCAGTGGAGCAGCATTTCACACCCAGATGTTGGTTCACCTGGCTGGTTTTGAGGGCCAGGCTGAGCCGCTGGCTGCAAGGGCTGCACTGGAGCAATACAAGGAAGACCTCACCCAGATCATACCTGCTTACAGGCGTTATAAGTCTAATTCAGTGTGTGTCGTGAAATGTCGAGGGGGTCTGGCATCATGTGACCCCTCCAGCGAGGTGCCAGAGGAGGGATCCATGACGGGACTCActgtgacagacagagagacaggaaagagTGTGACCATCCCTCTATCCGCTATCAAGACAGAGACAGGGAGAAGAAGGACCGTCTCTGGGCTGGATACCACCTCTGCAACTGTGTCCTCCTCCATTAACCTGGACCTTATCACGTCAGATCAGTACGCCCAGGCATACCTGCACCATTTGTTCTCTGATAAGGGACCTGTGGCAGAGCTGGAGAACTACTTTATCAAGGCTAGTGTCAATCTGAGAACACTAAGAATTGAACCAGGATGTACAAATAAAACAGGGGTGGGAAATGGTATGGAACAAAGTGATGGAGTGCATCTTAATGATCGGGCACAAGGCATTGATGGGGAACAAAGAGTGGACAGGGGCAAAGGAGATAATCGGGGAAAGACGGACAGGAGAgaaagacgagacgagacggAGAAAAGTGAGCAGAGAGATGAAAGTTTGCAACTCAGTATTGTGGAGACGCAGCCGGATGAGAGCCTCAATCATCATGCAACAAGTACATGAAAGCCATGACTAGACAGCAGCATCAGAAAGTGCCCGTCCTTTATTGAAGAGAAACATTAAACTAAACTCCGAAACATGAAGGATTTTTGCagtgttgtttgtcatttatTCAGAGAGCTTATAACCTACTGCTGGAAAGAAGCTGAATGGCGGTTTTGCTGATTTGTCTGCAATGATATATATACTACTAAAGTGTCAACCCTGGCCAAAAATCAACTTTGGGCTTCATGTGATTTCTATTAAGTGTGTTTCACACAGGCTTTTCAAACCTGTACAGTTTAATAACACCTACTCTAAAGCAATTTCATTAAACATTTACAACTTTCAAGGAAAGAGTTTGGTTgtgtaataaaaacatttttggctgta
>XM_039784532.1
GTTTAGGCATGGGGagtggttagggtaagaataccaAGGTAAGCCAATCAGATTAAGAAAAATGCGGGCCGCGAGGCACGTCCCGTGACGTCGACACTTCTAGCGGATCCGATCTAGCATCTACCGGGGAAGTGTGGCGGTGAAGAGACAGAGGCCGCCCAAAGCACAACTCTACTGTGTGCAGTAACAGAGTGAGAGATTAGATGTGACTGCTGAAATGCTGCTGGAACGTCAGTGTAAAATTTGACGGTGCTATTTTGGAGATGCTGCCATAAATACGAAATTACTGGTTTGTCAatacacacaggacacaaataCCATTATGGGCCAGCTGTTCTCATCAGAAGAAGAGCTTTCTCAAGTGAAGGATGCGATTGGTTCTCTCCTCTACAATGCCATGTTGGAGGGCGGTGCCGTACCTGTCCTCGGAGTCGTCCACCCTCTTCTCCTAGCCAATCACGATGAGAGCCTTGACTCCCAGGCCGCCAGCCTCCAGGAACAACTACAGCAGCTGCAGGGCGACATTGGGAAGAGGGCGCCAACCTACCTGAAGGATCTGATTGGCCGATTGGCATCCTTTTCAGATGAGCCACGCCTGGCCGGCCTGGTGGGATTGGTGGTTACTATGGTGATGGACATGGCCTACTCGTCATCGAAACAGTCATCAGGTGTGAAAGGGAAGTCAGCGGGGTCATCATCATGCCAGAGAGTTTGGGAGCTCCAGGAGGTGATGGAGGAGTACCTGAAGCGCTGCAGGATCAACCTGAGTGACAAAAGCAGGCTGATCCAGGACTCCATTCGACTTGAGGCCCAGCTCAGCCTCACCCTCACCCAGCTGAAGACCTGTCTGCTGGGGGGAGACTGTGACTCCAGGTCTCTGAGGCACTGGGCCAGTGGAGCAGCATTTCACACCCAGATGTTGGTTCACCTGGCTGGTTTTGAGGGCCAGGCTGAGCCGCTGGCTGCAAGGGCTGCACTGGAGCAATACAAGGAAGACCTCACCCAGATCATACCTGCTTACAGGCGTTATAAGTCTAATTCAGTGTGTGTCGTGAAATGTCGAGGGGGTCTGGCATCATGTGACCCCTCCAGCGAGGTGCCAGAGGAGGGATCCATGACGGGACTCActgtgacagacagagagacaggaaagagTGTGACCATCCCTCTATCCGCTATCAAGACAGAGACAGGGAGAAGAAGGACCGTCTCTGGGCTGGATACCACCTCTGCAACTGTGTCCTCCTCCATTAACCTGGACCTTATCACGTCAGATCAGTACGCCCAGGCATACCTGCACCATTTGTTCTCTGATAAGGGACCTGTGGCAGAGCTGGAGAACTACTTTATCAAGGCTAGTGTCAATCTGAGAACACTAAGAATTGAACCAGGATGTACAAATAAAACAGGGGTGGGAAATGGTATGGAACAAAGTGATGGAGTGCATCTTAATGATCGGGCACAAGGCATTGATGGGGAACAAAGAGTGGACAGGGGCAAAGGAGATAATCGGGGAAAGACGGACAGGAGAgaaagacgagacgagacggAGAAAAGTGAGCAGAGAGATGAAAGTTTGCAACTCAGTATTGTGGAGACGCAGCCGGATGAGAGCCTCAATCATCATGCAACAAGTACATGAAAGCCATGACTAGACAGCAGCATCAGAAAGTGCCCGTCCTTTATTGAAGAGAAACATTAAACTAAACTCCGAAACATGAAGGATTTTTGCagtgttgtttgtcatttatTCAGAGAGCTTATAACCTACTGCTGGAAAGAAGCTGAATGGCGGTTTTGCTGATTTGTCTGCAATGATATATATACTACTAAAGTGTCAACCCTGGCCAAAAATCAACTTTGGGCTTCATGTGATTTCTATTAAGTGTGTTTCACACAGGCTTTTCAAACCTGTACAGTTTAATAACACCTACTCTAAAGCAATTTCATTAAACATTTACAACTTTCAAGGAAAGAGTTTGGTTgtgtaataaaaacatttttggctgta
>XM_039784533.1
AGGTTTAGGCATGGGGagtggttagggtaagaataccaAGGTAAGCCAATCAGATTAAGAAAAATGCGGGCCGCGAGGCACGTCCCGTGACGTCGACACTTCTAGCGGATCCGATCTAGCATCTACCGGGGAAGTGTGGCGGTGAAGAGACAGAGGCCGCCCAAAGCACAACTCTACTGTGTGCAGTAACAGAGTGAGAGATTAGATGTGACTGCTGAAATGCTGCTGGAACGTCAGTGTAAAATTTGACGGTGCTATTTTGGAGATGCTGCCATAAATACGAAATTACTGGTTTGTCAatacacacaggacacaaataCCATTATGGGCCAGCTGTTCTCATCAGAAGAAGAGCTTTCTCAAGTGAAGGATGCGATTGGTTCTCTCCTCTACAATGCCATGTTGGAGGGCGGTGCCGTACCTGTCCTCGGAGTCGTCCACCCTCTTCTCCTAGCCAATCACGATGAGAGCCTTGACTCCCAGGCCGCCAGCCTCCAGGAACAACTACAGCAGGGCGACATTGGGAAGAGGGCGCCAACCTACCTGAAGGATCTGATTGGCCGATTGGCATCCTTTTCAGATGAGCCACGCCTGGCCGGCCTGGTGGGATTGGTGGTTACTATGGTGATGGACATGGCCTACTCGTCATCGAAACAGTCATCAGGTGTGAAAGGGAAGTCAGCGGGGTCATCATCATGCCAGCAGAGAGTTTGGGAGCTCCAGGAGGTGATGGAGGAGTACCTGAAGCGCTGCAGGATCAACCTGAGTGACAAAAGCAGGCTGATCCAGGACTCCATTCGACTTGAGGCCCAGCTCAGCCTCACCCTCACCCAGCTGAAGACCTGTCTGCTGGGGGGAGACTGTGACTCCAGGTCTCTGAGGCACTGGGCCAGTGGAGCAGCATTTCACACCCAGATGTTGGTTCACCTGGCTGGTTTTGAGGGCCAGGCTGAGCCGCTGGCTGCAAGGGCTGCACTGGAGCAATACAAGGAAGACCTCACCCAGATCATACCTGCTTACAGGCGTTATAAGTCTAATTCAGTGTGTGTCGTGAAATGTCGAGGGGGTCTGGCATCATGTGACCCCTCCAGCGAGGTGCCAGAGGAGGGATCCATGACGGGACTCActgtgacagacagagagacaggaaagagTGTGACCATCCCTCTATCCGCTATCAAGACAGAGACAGGGAGAAGAAGGACCGTCTCTGGGCTGGATACCACCTCTGCAACTGTGTCCTCCTCCATTAACCTGGACCTTATCACGTCAGATCAGTACGCCCAGGCATACCTGCACCATTTGTTCTCTGATAAGGGACCTGTGGCAGAGCTGGAGAACTACTTTATCAAGGCTAGTGTCAATCTGAGAACACTAAGAATTGAACCAGGATGTACAAATAAAACAGGGGTGGGAAATGGTATGGAACAAAGTGATGGAGTGCATCTTAATGATCGGGCACAAGGCATTGATGGGGAACAAAGAGTGGACAGGGGCAAAGGAGATAATCGGGGAAAGACGGACAGGAGAgaaagacgagacgagacggAGAAAAGTGAGCAGAGAGATGAAAGTTTGCAACTCAGTATTGTGGAGACGCAGCCGGATGAGAGCCTCAATCATCATGCAACAAGTACATGAAAGCCATGACTAGACAGCAGCATCAGAAAGTGCCCGTCCTTTATTGAAGAGAAACATTAAACTAAACTCCGAAACATGAAGGATTTTTGCagtgttgtttgtcatttatTCAGAGAGCTTATAACCTACTGCTGGAAAGAAGCTGAATGGCGGTTTTGCTGATTTGTCTGCAATGATATATATACTACTAAAGTGTCAACCCTGGCCAAAAATCAACTTTGGGCTTCATGTGATTTCTATTAAGTGTGTTTCACACAGGCTTTTCAAACCTGTACAGTTTAATAACACCTACTCTAAAGCAATTTCATTAAACATTTACAACTTTCAAGGAAAGAGTTTGGTTgtgtaataaaaacatttttggctgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784530.1 False 2009 mRNA 0.49 7 9747315 9754782
XM_039784531.1 False 1968 mRNA 0.49 7 9747312 9754782
XM_039784532.1 True 2011 mRNA 0.49 7 9747310 9754782
XM_039784533.1 False 2010 mRNA 0.49 7 9747308 9754782

Neighbor

gene id symbol gene type direction distance location
pno1 pno1 coding upstream 299832 9442876 ~ 9447476 (+)
LOC120547702 LOC101470025,LOC103386883 coding upstream 309398 9421344 ~ 9437910 (+)
LOC120548362 NA coding upstream 413310 9327374 ~ 9333998 (+)
LOC120548133 actr2,LOC104930021,LOC108423375,LOC105008543 coding upstream 799203 8930547 ~ 8948105 (+)
aftphb NA coding upstream 819818 8917425 ~ 8927490 (+)
mrps5 mrps5 coding downstream 342950 10097732 ~ 10123497 (+)
zgc:65997 LOC101480976,LOC102212345,LOC100706081,LOC104967569,LOC107089893,LOC105937212 coding downstream 428314 10183096 ~ 10187447 (+)
LOC120547607 NA coding downstream 466778 10221560 ~ 10236944 (+)
LOC120547519 vip coding downstream 773418 10528200 ~ 10534574 (+)
mtrf1l mtrf1l,LOC106904956,LOC103137471 coding downstream 796710 10551492 ~ 10557691 (+)
G192713 map4k3 non-coding upstream 66333 9678736 ~ 9680975 (+)
G192692 eef1a1a,LOC103386869,LOC105912050,LOC103476462,LOC106576970 non-coding upstream 106330 9638381 ~ 9640978 (+)
G192691 LOC104930997,LOC101166076,LOC103372934,LOC102208791 non-coding upstream 109297 9634765 ~ 9638011 (+)
G192667 NA non-coding upstream 256180 9487763 ~ 9491128 (+)
G192634 NA non-coding upstream 297487 9404402 ~ 9449821 (+)
G192733 NA non-coding downstream 12479 9767261 ~ 9772128 (+)
G192734 NA non-coding downstream 48513 9803295 ~ 9803651 (+)
G192735 NA non-coding downstream 141114 9895896 ~ 9896125 (+)
G192736 slc8a1,LOC106939074 non-coding downstream 145346 9900128 ~ 9900926 (+)
G192744 NA non-coding downstream 255505 10010287 ~ 10010512 (+)
arhgef33 arhgef33,LOC107098984 other upstream 74056 9653904 ~ 9673252 (+)
ddx43 ddx43,LOC107693529,LOC107588708 other upstream 122744 9606525 ~ 9624564 (+)
kcnq5a LOC101074332,LOC101486129 other upstream 144426 9496791 ~ 9602882 (+)
meis1b meis1,LOC101073206,LOC106613898,LOC103387108 other upstream 551892 9114656 ~ 9195416 (+)
bean1 bean1,LOC102779979 other upstream 1628245 8066336 ~ 8119063 (+)
pank1a LOC103364766,LOC102792137,LOC100705818,LOC106930799,LOC102312257 other downstream 438247 10193029 ~ 10219271 (+)
LOC120547507 NA other downstream 509315 10264097 ~ 10292289 (+)
LOC120547509 NA other downstream 560164 10314946 ~ 10323760 (+)
G192834 NA other downstream 686745 10441527 ~ 10442085 (+)
mrpl57 mrpl57 other downstream 831996 10586778 ~ 10591293 (+)

Expression


Co-expression Network