ppp1r3ca (ppp1r3c)


Basic Information

Item Value
gene id ppp1r3ca
gene name ppp1r3c
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 3589225 ~ 3591796 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784534.1
TCCCAGAGTGCTGAGCAACCCTCGTCACTGTAAGGCAGCaagagcaagagagaggaggaagaaaaggatGAGTGAGGACAGCATGAACTTTtagaaaagatagaaatcaAAAGGACTGACAACTGTTAAAAAGCTCTTCTCTCCTTggagctgttttttttcctttattccaTGAGTGCTACAAGTGTGCTCAGGTCTTTCAGTCCGTCAGCAATGCCTGGCCCAGTCATGCCGATGGACGTGGCTATGAGATTCTACATCAGCCACTCTCCGCCTCCTCTCCGGGGTTTCCTCAGCTCCTACGACGAGCTGCAGAGGACCCAGAAGAACCAGGCCAGCCAGTCGACCAGGCGCAGCCACAACCAGCAGCTCTACAAACCCCTGCGGCCCTGCCTCAGCAACCAGCAGAGAGCAGTGGACGATGGCGACTGCACGGACTGGAACAACAGCAAGGCCAGCAAAAAGAAGGTGGTGTTCGCCGACACGAGGGGCATGTCGCTCACCGCCATCCACGTCTTCTCCAAGTTCGACGATGAGCCGTATCAAAACAAGCGTTGCAGTGGAATCAGCGAGGAACTGCAGTTTGACATGTCAGACCTGGAAACGGCCACGATGGACCTGAAGATCAGCTCGGTGCGCAACCTGGCGCTGGACTTTAAACAGCCTTCGGCCGACTACCTGGACTTCCGGAACCGCCTGATTCAGAACTCTGTCTGCTTGGAGAACTGCTCGCTGCAGGAGCGCTCCCTAACCGGCACCATCAAGGTCCGGAACATGGGGTTTGAGAAGTCGGTGCAGTTGCGTGCCACCTTCGACTCGTGGGCAAGCTTCAGCGACTTCGAGTGCACCTTCATGAACAACGTCTACAGCTGCCAGGATACCGACACCTTTGCGTTCGTCGTGGATCTACCCGCCTACATCCCCCCACAGAACAGTGTCGAGTTCTGCATCTGCTTCAAAGCCCAGGGCCAGACCTTCTGGGACAATAACGACGGCAAGAACTACGTTCTCAAGCACATCGGCTGGAACGGAGAGGACCTGAACATTCGGATGTCCCCGACTTCCGTTGAGCAGAAAAAGCCTTCAGAGCACAAAAACGGGGGCGTGAAGGTGCTGGAGATGGAGTTTGATCAGTTCGGCAGCCCACGCATGTCCAGCGGACTCTTTCCTGGCTGGCAGAGCTGGGGTCAGATTGATAACGCCGTGCCTTATTGGTGAACACATCAGGATGTTTGCTGAAAATGACATTGGACTAAGATAACAGACACTGACAGGGCATTCAGTGCAAATCCAGCTGCGGGTTTGAACTTAGACTGGCTCTCAGCCACAAAATGAAATTAAGCAAACAACCTTTGCTTTTTTGTATTAGCAGAGAAAGTGTACAAACCTAGACCTAATGGTCTGGGGTTGGAGGATGAGGGATAAATGGGAAAAATCTATCTTGTTTCACATATTCCTCTCATGTAAAATATTAATGTGCCTTCTCTGAGTGCCTGCCCACTAAAATACAGACAAGTTGTACAGCACACAACAAATGCTGAGCCCCTTTTAAGGGCCTGACGTATTGGTTAAATATGCACTGATTGAGATGTCTCTCTCAATGTGATGTCTGTAAACATAAAAACGAAGTGGAAAGTGGAGCTGATTAAGTCCTTCATATTGAAGGGAACGTACTGGGGAGTGCATGGCGACAAAATGCTTCTCTACTAAAGGAAACACAGCTGATTaatttctgaaatgcaaaatgcaCACTAAACCTTTGCACCTTCAAATGAGAAAGTAATTTAACATTGTTAAAAGTGGCCTTTAAGTCATGCAGCCcattctttctttccctctgtgAAAATTGCACGTCTGATGAAAGATGTTTGAATGATGTAATATTAAGGTGACTTTGTTGAGGAATTTAGCTGCTGACAACAGACGTGTCTCAAGAGAGACTGCACGTGATTGGTTGTCTCGAACAAGGAAGACGTTTGGTAATTCCGGTGGCTACCGTATGTCGAGAAAGGTGTTTTTATTGTGTGatgagtgtacagtatgtgtggctGGAAGGGAGATTTTTCTTTGTTGaagaaaatcaattttttttctcactgtgAAAGAGAAGCTTGTGCTCCAGCATTGCATTTCACATGAAGATGTGGGCCATGTATTTCCCTTTCAGAAATAAATGTCTATATTTGTGCTAAAATA

Function

symbol description
ppp1r3c Predicted to enable [phosphorylase] phosphatase activity; glycogen binding activity; and protein phosphatase 1 binding activity. Predicted to be involved in glycogen biosynthetic process and regulation of glycogen biosynthetic process. Predicted to be located in cytosol. Predicted to be part of protein phosphatase type 1 complex.

NR:

description
PREDICTED: protein phosphatase 1 regulatory subunit 3C

GO:

id name namespace
GO:0005977 glycogen metabolic process biological_process

KEGG:

id description
K07189 PPP1R3; protein phosphatase 1 regulatory subunit 3A/B/C/D/E

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784534.1 True 2196 mRNA 0.48 2 3589225 3591796

Neighbor

gene id symbol gene type direction distance location
fgfbp3 fgfbp3 coding upstream 27805 3548104 ~ 3561420 (+)
LOC120548444 LOC108246626 coding upstream 54997 3532714 ~ 3534228 (+)
LOC120548518 LOC103361435,LOC104937509 coding upstream 96852 3480321 ~ 3492373 (+)
LOC120548100 LOC103372105 coding upstream 207134 3347038 ~ 3382091 (+)
LOC120548121 NA coding upstream 262175 3326153 ~ 3327050 (+)
LOC120547503 ankrd1 coding downstream 221611 3813407 ~ 3827078 (+)
LOC120548162 NA coding downstream 240790 3832586 ~ 3845675 (+)
LOC120548448 NA coding downstream 415930 4007726 ~ 4064499 (+)
LOC120547632 NA coding downstream 758808 4350604 ~ 4352975 (+)
LOC120548450 NA coding downstream 786409 4378205 ~ 4382442 (+)
G191656 NA non-coding upstream 155621 3433346 ~ 3433604 (+)
G191654 NA non-coding upstream 191498 3397395 ~ 3397727 (+)
G191650 NA non-coding upstream 275008 3309048 ~ 3314217 (+)
G191610 NA non-coding upstream 442376 3142057 ~ 3146849 (+)
G191617 NA non-coding upstream 532989 3055902 ~ 3056236 (+)
G191785 NA non-coding downstream 31554 3623350 ~ 3624702 (+)
G191787 NA non-coding downstream 34859 3626655 ~ 3626919 (+)
G191789 NA non-coding downstream 46383 3638179 ~ 3640170 (+)
G191790 NA non-coding downstream 48822 3640618 ~ 3643020 (+)
G191793 NA non-coding downstream 110796 3702592 ~ 3730541 (+)
LOC120547552 NA other upstream 250140 3163824 ~ 3339085 (+)
LOC120548437 NA other upstream 478267 3093967 ~ 3110958 (+)
G191571 NA other upstream 570777 2770633 ~ 3018448 (+)
G191573 sptbn1,LOC107396444 other upstream 810858 2775308 ~ 2778367 (+)
G191567 sptbn1 other upstream 823163 2762050 ~ 2766062 (+)
arfgef3 arfgef3,LOC102791283 other downstream 658809 4250605 ~ 4347579 (+)
G191903 NA other downstream 696101 4287897 ~ 4288644 (+)
LOC120548449 NA other downstream 775355 4367151 ~ 4368326 (+)
LOC120548511 LOC101485366,LOC100693926 other downstream 1037261 4629057 ~ 4678348 (+)
G192040 LOC104951079 other downstream 1294580 4886376 ~ 4887023 (+)

Expression


Co-expression Network