LOC120548438



Basic Information


Item Value
gene id LOC120548438
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 3255450 ~ 3256441 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039784698.1
ATCAGCAGAAAACGCCTCACACAGAACAAGGAAGGAAGTAAGGGTGTTGGCGCGTTGTCGACGGGTGGCGAGCTAAAAACTCGACGTTTTGTTGTAATGAAGGTCGATATTCTTCCTCTCGTGTGTTGACCTGAGAACATGGAGAAACTGACCGGGTGTTGGCTGCTGTTGGCGGCGCTGAGCTCCGCTCTAGCCCAGGACACCACGACATACTTCAAGGATGGCGGGGAGCTAACGATGGACGTGAGGCCTCGTCCTCCTGAACCTCTCTACAACATCGTGTGGAAGATTAACGCTGACCTGGTAGCTGAGTGGATCAAAGATCAAGTCACAGGTTCAGTTTTAGTTCCTTTGACTTATTACAGAACCTTTGATGGCCGCTCAACCCTGGATTTAACCACTGGACGTTTGGTAATCAACAAAATGACTAAAGCTGACATTGGTGTGTATTCAGTGGAAGTCAACAACAAGGTCCAGAATGAGAAATATAACCCTTTAATGATCAAAGAAGTCCCCCAGCCTGAGGTAGAGCCAAAACCgttgacatgttccttcattaggGACAGCTGTACGCTGGTCTGTGAAGCGAACATCACCGAGCCAGCTGGACCGGTCACCTACAGCTGGAAGAAGGATGACGGAGAGTGGGAGGAACCGGGAAAGAACTTGGACATCACCAAGAATGGGACATCAGATGTGAAGACCTTCACCTGCCGGATACAGAACCCAGTCAGCGAGAGAGACAGTAAACCCAAAGATAATCCGCTCTTAGAGAAGGACTCAGGGACCTCTGGAGATGGGGGATTAATCGAGGCAGCAGCCCTGCTGGTGAAAGTAaacctaatgctgctgctgctaagaATGCAGAAGTGGACCGCCAGCATCACCTGCTACTGCTGA

Function


GO:

id name namespace
GO:0005212 structural constituent of eye lens molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039784698.1 True 900 mRNA 0.50 2 3255450 3256441

Neighbor


gene id symbol gene type direction distance location
kif11 kif11 coding upstream 4584 3215244 ~ 3250866 (+)
adob ado,LOC107097159,LOC103372108 coding upstream 79278 3173605 ~ 3176172 (+)
trnah-gug_17 NA coding upstream 104906 3150473 ~ 3150544 (+)
trnar-acg_20 NA coding upstream 105564 3149814 ~ 3149886 (+)
znf365 znf365,LOC100708019,LOC101465348,LOC102787219 coding upstream 117699 3123767 ~ 3137751 (+)
LOC120547879 NA coding downstream 4281 3260722 ~ 3268081 (+)
LOC120547878 NA coding downstream 7057 3263498 ~ 3268081 (+)
slc22a15 slc22a15 coding downstream 20203 3276644 ~ 3303286 (+)
LOC120547573 NA coding downstream 49937 3306378 ~ 3308000 (+)
LOC120548121 NA coding downstream 69712 3326153 ~ 3327050 (+)
G191610 NA non-coding upstream 108601 3142057 ~ 3146849 (+)
G191617 NA non-coding upstream 199214 3055902 ~ 3056236 (+)
G191596 NA non-coding upstream 279199 2970984 ~ 2976251 (+)
G191595 NA non-coding upstream 289770 2964930 ~ 2965680 (+)
G191594 NA non-coding upstream 302832 2952230 ~ 2952618 (+)
G191650 NA non-coding downstream 52607 3309048 ~ 3314217 (+)
G191654 NA non-coding downstream 140954 3397395 ~ 3397727 (+)
G191656 NA non-coding downstream 176905 3433346 ~ 3433604 (+)
G191785 NA non-coding downstream 366909 3623350 ~ 3624702 (+)
G191787 NA non-coding downstream 370214 3626655 ~ 3626919 (+)
LOC120548437 NA other upstream 144492 3093967 ~ 3110958 (+)
G191571 NA other upstream 237002 2770633 ~ 3018448 (+)
G191573 sptbn1,LOC107396444 other upstream 477083 2775308 ~ 2778367 (+)
G191567 sptbn1 other upstream 489388 2762050 ~ 2766062 (+)
G191565 sptbn1 other upstream 493771 2756154 ~ 2761679 (+)
arfgef3 arfgef3,LOC102791283 other downstream 994164 4250605 ~ 4347579 (+)
G191903 NA other downstream 1031456 4287897 ~ 4288644 (+)
LOC120548449 NA other downstream 1110710 4367151 ~ 4368326 (+)
LOC120548511 LOC101485366,LOC100693926 other downstream 1372616 4629057 ~ 4678348 (+)
G192040 LOC104951079 other downstream 1629935 4886376 ~ 4887023 (+)

Expression



Co-expression Network