LOC120548444 (LOC108246626)


Basic Information

Item Value
gene id LOC120548444
gene name LOC108246626
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 3532714 ~ 3534228 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784703.1
atggaaaacacgacgtggagtaatttcacccgaGTTCTGTCGGAGCTGGACGGGCCGGGCGgcgggggagagggagaggaggaggaggacggggGAGGCGGCAGGGGACTGCGCGTCCTCGTCGGCTGCGTCCTGTCCCTGCTCATCGTGTCCACGCTGCTCGGGAACGCGCTGGTGTGCGCCGCGGTGGTCCGCTTCCGCCACCTGCGCTCCAAAGTCACCAACTTCTTCGTCATCTCGCTGGCCGTGTCGGACCTGCTCGTGGCGGTGCTCGTGATGCCCTGGGAGGCCATCACGGAGGTGACCGGCACGTGGCTGTTTGGGCGCTTCTGCGGCGTCTGGATCGCCTTCGACATCATGTGCTCCACGGCGTCCATCTTGCACCTGTGCATCATCAGCGTGGACCGCTACTGGGCCATCGCCAGCCCCTTCAAATACGAGCAGAAGATGACTCAGCGGGTGGCGTTTGTCATGATCGGGGTGGCGTGGTTGCTGTCCATCCTCATCTCCTTCATCCCGGTGCAGCTCAACTGGCACCGCAGGAACTTCACAAACAGCAGCAACGCCAATGCCAGAAGCTGCGTCGCCAACCTGAACAAAACCTACGCCATCTCTTCCTCACTCATCAGCTTCTACATCCCGGTGGTGATCATGATCGCCACCTACACCCGCATCTTCCGGATCGCTCAGACCCAAATCCGCCGCATCACCTCTTTGGAGCGGGCGGCGGAGCAGGCGCAGAGCCACGGCCACGGCGCCAACCGGaaccggcagcagcagcagcagtggcagcagcacCCCCGGACCAATGACGAAGCCTCGCTCAAGTCGTCGTTTAAGAAGGAAACCAAAGTCCTGAAGACGCTCTCCATCATCATGGGCGTCTTCGTCTTCTGCTGGCTGCCGTTCTTCGTCCTCAACTGCGCTGTCCCGTTCTGCGACCCGCCGTGCGTCAGCGACGCCACCTTCACCGTCTTCGTGTGGTTCGGCTGGGCCAACTCCTCGCTCAACCCCATCATCTACGCTTTCAACGCCGACTTCCGCCGCGCCTTCGCCACCATCCTGGGCTGCGGCCAGATGCGCTCCAACAATGCGGTGGAAGCGGTGAACTTCAGCGACGAGCTGGTTTCCTACCACCACGACACGACGCTCCACAAGGAGGCGGCGCCGCAGCTGGCGCCGACCCAGCCACTTCCCCGCAACATCATTGTCGGGTCCGATCACCTGGAGGACGTGAGCGCGCAGTTCGACGAAGAGTCGATGATCTCCAATGCTTCTCGGAGCTGCAACAGACTGCTGCTGCTTCCCGCAACCGTGCAGCTCGAGGACGACCACGAAATCTCCCTGGAGACGATCACGCCGTTCACGTCAGCGGCTGCGGCGGCCGCGGGGGGGCTGGAGAGCGATGCACTGATACCAGGACAAGTCCACCACGACGGCTAG

Function

NR:

description
PREDICTED: D(1)-like dopamine receptor

GO: NA

KEGG:

id description
K22790 Octbeta; octopamine receptor beta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784703.1 True 1443 mRNA 0.63 2 3532714 3534228

Neighbor

gene id symbol gene type direction distance location
LOC120548518 LOC103361435,LOC104937509 coding upstream 40341 3480321 ~ 3492373 (+)
LOC120548100 LOC103372105 coding upstream 150623 3347038 ~ 3382091 (+)
LOC120548121 NA coding upstream 205664 3326153 ~ 3327050 (+)
LOC120547573 NA coding upstream 224714 3306378 ~ 3308000 (+)
slc22a15 slc22a15 coding upstream 229428 3276644 ~ 3303286 (+)
fgfbp3 fgfbp3 coding downstream 13876 3548104 ~ 3561420 (+)
ppp1r3ca ppp1r3c coding downstream 54997 3589225 ~ 3591796 (+)
LOC120547503 ankrd1 coding downstream 279179 3813407 ~ 3827078 (+)
LOC120548162 NA coding downstream 298358 3832586 ~ 3845675 (+)
LOC120548448 NA coding downstream 473498 4007726 ~ 4064499 (+)
G191656 NA non-coding upstream 99110 3433346 ~ 3433604 (+)
G191654 NA non-coding upstream 134987 3397395 ~ 3397727 (+)
G191650 NA non-coding upstream 218497 3309048 ~ 3314217 (+)
G191610 NA non-coding upstream 385865 3142057 ~ 3146849 (+)
G191617 NA non-coding upstream 476478 3055902 ~ 3056236 (+)
G191785 NA non-coding downstream 89122 3623350 ~ 3624702 (+)
G191787 NA non-coding downstream 92427 3626655 ~ 3626919 (+)
G191789 NA non-coding downstream 103951 3638179 ~ 3640170 (+)
G191790 NA non-coding downstream 106390 3640618 ~ 3643020 (+)
G191793 NA non-coding downstream 168364 3702592 ~ 3730541 (+)
LOC120547552 NA other upstream 193629 3163824 ~ 3339085 (+)
LOC120548437 NA other upstream 421756 3093967 ~ 3110958 (+)
G191571 NA other upstream 514266 2770633 ~ 3018448 (+)
G191573 sptbn1,LOC107396444 other upstream 754347 2775308 ~ 2778367 (+)
G191567 sptbn1 other upstream 766652 2762050 ~ 2766062 (+)
arfgef3 arfgef3,LOC102791283 other downstream 716377 4250605 ~ 4347579 (+)
G191903 NA other downstream 753669 4287897 ~ 4288644 (+)
LOC120548449 NA other downstream 832923 4367151 ~ 4368326 (+)
LOC120548511 LOC101485366,LOC100693926 other downstream 1094829 4629057 ~ 4678348 (+)
G192040 LOC104951079 other downstream 1352148 4886376 ~ 4887023 (+)

Expression


Co-expression Network